NO24G00500, NO24G00500 (gene) Nannochloropsis oceanica

Overview
NameNO24G00500
Unique NameNO24G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1454
Alignment locationchr24:161412..162865 +

Link to JBrowse

Properties
Property NameValue
DescriptionAsparaginyl-tRNA Synthetase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:161412..162865 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0003824catalytic activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR006195aa-tRNA-synth_II
IPR004364aa-tRNA-synt_II
IPR002312Asp/Asn-tRNA-synth_IIb
Homology
BLAST of NO24G00500 vs. NCBI_GenBank
Match: EWM24295.1 (asparaginyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 710.7 bits (1833), Expect = 2.600e-201
Identity = 352/439 (80.18%), Postives = 376/439 (85.65%), Query Frame = 0
Query:    1 MSMQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY--------------------------------------------*AVAILEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            +SMQAVLE +KT+GF  ATPA+CGGVGASF ITG LV+SPA+GQ +ELHAT V VLGKVYGG++G VGGKLYPLSKKAHSME+LR NAHLRARTRVT SVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLP+KG+P+LP  PDGSID+S+DFFG+RTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADL+MDMALAEDYLKY                                             AVA LEKDLA++KV F+VKPEWGCDLGSEHERYLTEQVY+RPVIVTNYPKDIKAFYMRLDE GKTVSAMDILVPKIGEIIGGSQREERLDVLKARC EMGLEE ALWWYL+LR+YGSHKHAGFGLGFERLILF+TGLENIRDVIPFPRFPAHAEF
Sbjct:  338 LSMQAVLEADKTQGFAEATPASCGGVGASFSITGTLVRSPAEGQAVELHATVVEVLGKVYGGEDGGVGGKLYPLSKKAHSMEYLRCNAHLRARTRVTGSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPEKGAPRLPIRPDGSIDYSQDFFGRRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLEMDMALAEDYLKYCVWYALRHNEEDLVLLEKVPGGEAGLRERLRNVLENPFVRITYTEAVATLEKDLAAEKVAFQVKPEWGCDLGSEHERYLTEQVYKRPVIVTNYPKDIKAFYMRLDEDGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCREMGLEEAALWWYLDLRRYGSHKHAGFGLGFERLILFITGLENIRDVIPFPRFPAHAEF 776          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: CBJ25847.1 (Asparaginyl-tRNA Synthetase [Ectocarpus siliculosus])

HSP 1 Score: 510.4 bits (1313), Expect = 5.100e-141
Identity = 259/434 (59.68%), Postives = 305/434 (70.28%), Query Frame = 0
Query:   17 FATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPK-----------LPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY*A--------------------------------------------VAILEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            F   A+CGGVGAS  + G +V S  KGQ++E+ A +V VLG VY  D G VG   YPL+KKAHS+EFLR+ AHLR RT++ S+ MRVRHAMA+ATHKFFNDRGF Y+HTP++TGADCEGAGE F V+TLLPD G  +               P G++D+SKDFF +RT LTVSGQLNVET+AC L DVYTFGPTFRAENSHT+RHLAEFWMIEPE+AFADL  DM LAEDYLKY                                              V ++ KD    KV+F V PEWG DLGSEHERY+ E+VY  P IVT+YPKDIKAFYM+L+  GKTV+AMDILVPKIGEIIGGSQREE L  L  R  EM L E+++ WYL+LR+YG+ +HAGFGLGFERL++F TG+ENIRDVIPFPR+P HA F
Sbjct:  373 FDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEVLGCVYEPD-GTVGASTYPLAKKAHSLEFLRSIAHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLPDAGGEEGXXXXXXXXXXXXMTPAGAVDYSKDFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVEFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMNLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 805          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: OEU08414.1 (Asparaginyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 506.5 bits (1303), Expect = 7.300e-140
Identity = 262/451 (58.09%), Postives = 317/451 (70.29%), Query Frame = 0
Query:    2 SMQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGG--DNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLL------PDKGSPKLPTLP-----DGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY--------------------------------------------*AVAILEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            S+Q VL+ EKTEGF+     N GG GASF++ G L+ S   GQ +EL  T   +LG VYGG  +  E+GG LYP+SKKAH++E +R +AHLRAR RV ++ MR+RH MAYATH FF++ GF Y+HTP++TGADCEGAGE F VTTLL       D   P  PT P      G++D+SKDFFGKR +LTVSGQLNVET+AC LSDVYTFGPTFRAENSHT RHLAEFWMIEPEI FADL  D+ LAEDYLKY                                             A+ +L+K      VKFE  P WG DL SE ERYL E+VY++PV +T+YPK+IK+FYM+L++  KTV+A+DILVPKIGEIIGGSQRE R+DVLK RC EMGL+ + +WWYL+LR+YG+  HAGFGLGFERLILF+TGL+NIRDVIPFPR+P +AEF
Sbjct:   67 SIQCVLDSEKTEGFDEC--KNSGGTGASFQMVGTLIASQGDGQAVELAVTTGKLLGAVYGGNIEGTEIGGALYPMSKKAHTLEHMREHAHLRARGRVHAAAMRIRHCMAYATHTFFHNHGFLYIHTPILTGADCEGAGEQFGVTTLLGSDHLETDVTIPIDPTKPVNETVVGAVDYSKDFFGKRVNLTVSGQLNVETHACALSDVYTFGPTFRAENSHTGRHLAEFWMIEPEICFADLSDDINLAEDYLKYCVKFALENCAEDLEFFENSPHGEVGLRDRLKNVLDNPFQRLTYTEAIKVLQKAEKDGDVKFEEDPVWGIDLPSEMERYLCEKVYKKPVCLTDYPKEIKSFYMKLNDDEKTVAAVDILVPKIGEIIGGSQREHRMDVLKKRCEEMGLDAKQVWWYLDLRRYGTVPHAGFGLGFERLILFITGLQNIRDVIPFPRYPQNAEF 515          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: XP_012899431.1 (uncharacterized protein [Blastocystis hominis] >CBK25383.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 502.7 bits (1293), Expect = 1.100e-138
Identity = 255/434 (58.76%), Postives = 313/434 (72.12%), Query Frame = 0
Query:    2 SMQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY*AVAILE---KDL-------------------------------------ASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            SMQ VL+ E+   +E    A  G VG   +I G+LVKSPAKGQ +ELHAT+VVVL        G    K +PL+KK H++E LR  AHLR+R+   ++V RVR++ A+ATH FF  RGFKY+HTP+ITGADCEGAGEMFTVTT+L D+    +P   +G ID+SKDFFGK   +TVSGQLNVETY C L DVYTFGPTFRAENSH+ RHLAEFWMIEPE+AF DL MDMA+AEDY+K+    ++E    DL                                     A+K VKFEV+P WG DLGSEHERYLTEQVY+ PVI+T+YPK+IKAFYM+++E GKTV AMD+LVPKIGE+IGGSQREE LDVL+ R  E+G+ +E L WYL+LR+YGS  H+GFGLGFERL++FVTG+ENIRDVIPFPR+P +A++
Sbjct:   89 SMQCVLDSERVPNYEEVLKA--GNVGVCLQIKGVLVKSPAKGQFVELHATEVVVL--------GSCDAKTFPLAKKRHTLEHLRDIAHLRSRSNTIAAVARVRNSCAFATHLFFQQRGFKYIHTPIITGADCEGAGEMFTVTTML-DENIKDIPQTKEGKIDYSKDFFGKHVKMTVSGQLNVETYCCALCDVYTFGPTFRAENSHSVRHLAEFWMIEPEMAFCDLKMDMAVAEDYVKFCTAYVMEHNKDDLEFFEKQIEPGLHDRLRNVLEHPFVHLPYTKAIEILQEAAKTVKFEVQPYWGLDLGSEHERYLTEQVYKCPVIMTDYPKEIKAFYMKVNEDGKTVRAMDVLVPKIGELIGGSQREENLDVLEKRIEELGMAKEGLEWYLDLRRYGSVPHSGFGLGFERLVMFVTGMENIRDVIPFPRWPKNADY 511          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: XP_014529913.1 (asparagine tRNA ligase [Blastocystis sp. subtype 4] >KNB46483.1 asparagine tRNA ligase [Blastocystis sp. subtype 4])

HSP 1 Score: 493.0 bits (1268), Expect = 8.400e-136
Identity = 248/434 (57.14%), Postives = 312/434 (71.89%), Query Frame = 0
Query:    2 SMQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY*A----------VAILEKDL------------------------------ASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            ++Q +++ EK   ++    A  G VG   +I G+LVKSPA GQ +ELHA +VVVL        G      +PL+KK H++E LR  AHLR+RT    +V RVR++ A+ATH FF +RGFKY+HTP+IT ADCEGAGEMFTVTT+L +K    +P  P+G ID+SKDFFGK   +TVSGQLNVETY C L DVYTFGPTFRAENSH+ RHL+EFWMIEPE+AFADL++DMA+AEDY+K+            +A  EK +                              A+K VKFEVKP WG DLGSEHERYLTEQV++RPVI+T+YPK+IKAFYM+L+E GKTV AMDILVPKIGE+IGGSQREE L+VL+ R  EM + ++ L WYL+LR+YG+  H+GFGLGFERL++FVTG+ENIRDVIPFPR+P +A++
Sbjct:   88 NLQCIMDSEKVSNYDQVLKA--GNVGVCLQIKGILVKSPAAGQPVELHAVEVVVL--------GACDPAKFPLAKKRHTLEHLRDIAHLRSRTNTIGAVARVRNSCAFATHLFFQERGFKYIHTPIITTADCEGAGEMFTVTTMLDEK-VKDIPATPEGMIDYSKDFFGKHAKMTVSGQLNVETYCCALCDVYTFGPTFRAENSHSVRHLSEFWMIEPEMAFADLEVDMAVAEDYVKFCTSYVMEHNADDLAFFEKQIEPGLLDRLKNVLESPFVHLPYTKAIEILEEAAKTVKFEVKPYWGLDLGSEHERYLTEQVFKRPVIMTDYPKEIKAFYMKLNEDGKTVRAMDILVPKIGELIGGSQREEHLEVLEKRIEEMHMSKDTLEWYLDLRRYGTVPHSGFGLGFERLVMFVTGMENIRDVIPFPRWPKNADY 510          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: OAO16177.1 (asparaginyl-tRNA synthetase [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 488.0 bits (1255), Expect = 2.700e-134
Identity = 243/434 (55.99%), Postives = 308/434 (70.97%), Query Frame = 0
Query:    2 SMQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY*AVAILEKDL----------------------------------------ASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            ++Q V++ EK   ++    +  G VG   +I G+LVKSPA GQ +ELH  +V VL        G    K +PL+KK H++E LR  AHLR+RT   ++V RVR++ A+ATH FF +RGFKY+HTP+ITGADCEGAGEMFTVTT+L D+    +P   DG ID+SKDFFGK   +TVSGQLNVETY C LSDVYTFGPTFRAENSH+ RHLAEFWMIEPE+AFADL +DM +AEDY+K+    ++E +                                         A+K VKFEV+P WG DLGSEHERYLTEQV+++PVI+ +YPK+IKAFYM+L+E GKTV AMDILVPKIGE+IGGSQREE L++L+ R  E+ +++  L WYL+LR+YGS  H+GFGLGFERL++FVTG+ENIRDVIPFPR+P +A +
Sbjct:   89 NLQCVMDSEKVANYKEVIKS--GNVGVCLQIKGILVKSPAAGQSVELHCQEVTVL--------GACDAKTFPLAKKRHTLEHLRDIAHLRSRTNTIAAVARVRNSCAFATHLFFQERGFKYIHTPIITGADCEGAGEMFTVTTML-DENIKDIPATKDGKIDYSKDFFGKHAKMTVSGQLNVETYCCALSDVYTFGPTFRAENSHSVRHLAEFWMIEPEMAFADLTIDMEVAEDYVKFCTAYVMEHNADDLAFFEKQIEPGLHDRLKNVLESPFVRLPYTKAIEILTEAAKTVKFEVQPYWGLDLGSEHERYLTEQVFKKPVIMIDYPKEIKAFYMKLNEDGKTVRAMDILVPKIGELIGGSQREENLELLEKRIDELKMDKNGLQWYLDLRRYGSVPHSGFGLGFERLVMFVTGMENIRDVIPFPRWPKNASY 511          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: XP_009530416.1 (hypothetical protein PHYSODRAFT_354926 [Phytophthora sojae] >EGZ12987.1 hypothetical protein PHYSODRAFT_354926 [Phytophthora sojae])

HSP 1 Score: 485.0 bits (1247), Expect = 2.300e-133
Identity = 251/435 (57.70%), Postives = 304/435 (69.89%), Query Frame = 0
Query:    3 MQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY------------------------------------------*AVAILEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            +Q V+  E+TEGF  A  +  GGVGASF + G++VKSPAKGQE+E+ A +V    KVYGG         YP+SKK H++E LRA+AHLR R+ +  + MRVR+AMA+ATH+FFN RGF Y+HTP+IT +DCEGAGEMF+VTTLL      KLP   D  +D+ KDFF + + L+VSGQLNVET+ C LSDVYTFGPTFRAENS+T+RHLAEFWMIEPEIAFADL  D+ LAEDYLK+                                           AV +L K    KK KF VKP WG D GSEHERYLTE VY++PV++ +YPK+ K+FYMRL++ GKTV+A D+LVP +GEIIGGS REERLDVL+AR  E G   E   WYL+LRKYGS  HAGFGLGFERLI +VTG+ENIRDVIPFPR+P +A F
Sbjct:   70 VQCVINKEETEGFADAIAS--GGVGASFSVEGVVVKSPAKGQEVEVKAAKV----KVYGGIPDSA---TYPMSKKRHTLEHLRAHAHLRPRSNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPIITESDCEGAGEMFSVTTLLSQHPDGKLPLTKDNKVDYQKDFFDRPSYLSVSGQLNVETHCCALSDVYTFGPTFRAENSNTSRHLAEFWMIEPEIAFADLKDDIDLAEDYLKFCVQYALDHCTEDLEFFNKNVEKGLLERLAATVESPFVRISYTDAVELLLKPEHLKKGKFSVKPVWGTDFGSEHERYLTETVYKKPVVIYDYPKEFKSFYMRLNDDGKTVAAADVLVPNVGEIIGGSAREERLDVLEARIRESGANPEDYKWYLDLRKYGSVPHAGFGLGFERLIRYVTGIENIRDVIPFPRWPGNAAF 495          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: XP_008899635.1 (asparagine-tRNA ligase [Phytophthora parasitica INRA-310] >ETI54850.1 asparagine-tRNA ligase [Phytophthora parasitica P1569] >ETK94706.1 asparagine-tRNA ligase [Phytophthora parasitica] >ETL48104.1 asparagine-tRNA ligase [Phytophthora parasitica] >ETM01199.1 asparagine-tRNA ligase [Phytophthora parasitica] >ETM54379.1 asparagine-tRNA ligase [Phytophthora parasitica] >ETN15000.1 asparagine-tRNA ligase [Phytophthora parasitica INRA-310] >ETO83666.1 asparagine-tRNA ligase [Phytophthora parasitica P1976] >ETP24690.1 asparagine-tRNA ligase [Phytophthora parasitica CJ01A1] >KUF85707.1 Asparagine--tRNA ligase [Phytophthora nicotianae] >KUF91356.1 Calcium-transporting ATPase type 2C member 1 [Phytophthora nicotianae])

HSP 1 Score: 483.0 bits (1242), Expect = 8.700e-133
Identity = 247/435 (56.78%), Postives = 302/435 (69.43%), Query Frame = 0
Query:    3 MQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY------------------------------------------*AVAILEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            +Q V+  E+TEGF  A  +  GGVGASF + G++VKSPAKGQE+E+ A +V V G +            YP+SKK H++E LRA+AHLR R+ +  + MRVR+AMA+ATH+FFN RGF Y+HTP+IT +DCEGAGEMF VTTLL      KLP   +  +D++KDFF + + L+VSGQLNVET+ C LSDVYTFGPTFRAENS+T+RHLAEFWMIEPEIAFADL  D+ LAEDYLK+                                           AV +L K    KK KF VKP WG D GSEHERYLTE VY++PV++ +YPK+ K+FYMRL++ GKTV+A D+LVP +GEIIGGS REERLDVL+AR  E G   E   WYLELRKYG+  HAGFGLGFERLI +VTG+ENIRDVIPFPR+P +A F
Sbjct:   70 VQCVINKEETEGFAEAVAS--GGVGASFSVEGVVVKSPAKGQEVEIKAAKVTVYGSI-------PDSATYPMSKKRHTLEHLRAHAHLRPRSNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPIITESDCEGAGEMFGVTTLLSQHADGKLPLTKENKVDYTKDFFDRPSYLSVSGQLNVETHCCALSDVYTFGPTFRAENSNTSRHLAEFWMIEPEIAFADLKDDIDLAEDYLKFCVQYALDHCTEDLEFFNKNVEKGLLDRLAATVESPFVRISYTDAVELLLKPEHLKKGKFSVKPVWGTDFGSEHERYLTETVYKKPVVIYDYPKEFKSFYMRLNDDGKTVAAADVLVPNVGEIIGGSAREERLDVLEARIRESGANPEDYKWYLELRKYGTVPHAGFGLGFERLIRYVTGIENIRDVIPFPRWPGNASF 495          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: CCI42381.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 481.9 bits (1239), Expect = 1.900e-132
Identity = 243/436 (55.73%), Postives = 303/436 (69.50%), Query Frame = 0
Query:    2 SMQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY------------------------------------------*AVAILEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            S+Q V+   +TEGF  A  +  GGVGASF + G +V+SPAKGQE+E+ A++V V G +            YP+SKK H++E LR  AHLR R+ +  + MRVRHAMA+ATH+FF+  GF Y+HTP+IT +DCEGAGEMF VTTL+P   +  +   P GS+DFSKDFF +   L+VSGQLNVET+ C LSDVYTFGPTFRAENS+T RHLAEFWMIEPEIAFADL M++ LAEDYLKY                                           A+ +L +    KK KF V+PEWG DLGSEHERYLTE VY+ PV++ +YPK+IK+FYMRL++ GKTV+A D+LVP++GEIIGGSQREER +VL+ R L+ G   E   WY++LR+YGS  H+GFGLGFERLI FVTG+ENIRDVIPFPR+P +A F
Sbjct:   62 SIQVVITKGETEGFAAALAS--GGVGASFSVVGKVVESPAKGQEIEIKASKVDVYGTI-------PDASTYPMSKKRHTLEHLRMYAHLRPRSNIHGATMRVRHAMAFATHEFFHTHGFLYIHTPIITTSDCEGAGEMFHVTTLMPKNANDTISRTPSGSVDFSKDFFNRAAYLSVSGQLNVETHCCALSDVYTFGPTFRAENSNTARHLAEFWMIEPEIAFADLKMNIDLAEDYLKYCARYALEYCREDLVFFDQQVEKGLVERLENTVAKAFIRMTYTDAIQLLSEPKHRKKGKFTVQPEWGADLGSEHERYLTEIVYKHPVVIHDYPKEIKSFYMRLNDDGKTVAAADVLVPRVGEIIGGSQREERYEVLEQRILDSGANVEDYQWYMDLRRYGSVPHSGFGLGFERLIRFVTGIENIRDVIPFPRWPGNASF 488          
BLAST of NO24G00500 vs. NCBI_GenBank
Match: OWZ18642.1 (Asparaginyl-tRNA synthetase [Phytophthora megakarya])

HSP 1 Score: 481.5 bits (1238), Expect = 2.500e-132
Identity = 248/435 (57.01%), Postives = 301/435 (69.20%), Query Frame = 0
Query:    3 MQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHATQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSVMRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY------------------------------------------*AVAILEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF 396
            +Q V+  E+TEGF  A  +  GGVGASF + G +VKSPAKGQE+EL AT+V V G       G      YP+SKK H++E LRA+AHLR R+ +  + MRVR+AMA+ATH+FFN RGF Y+HTP+IT +DCEGAGEMF VTTLL      KLP   D  +D++KDFF + + L+VSGQLNVET+ C LSDVYTFGPTFRAENS+T+RHLAEFWM+EPEIAFADL  ++ LAEDYLKY                                           AV +L +    KK KF VKP WG D GSEHERYLTE VY++PV++ +YPK+ K+FYMRL++  KTV+A D+LVP +GEIIGGS REERLDVL+AR  E G   E   WYLELRKYGS  HAGFGLGFERL+ +VTG+ENIRDVIPFPR+P +A F
Sbjct:   70 VQCVINKEETEGFAAAIAS--GGVGASFSVEGEVVKSPAKGQEVELKATKVTVYG-------GIPDSATYPMSKKRHTLEHLRAHAHLRPRSNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPIITESDCEGAGEMFGVTTLLSQHTDGKLPMTKDNKVDYTKDFFDRPSFLSVSGQLNVETHCCALSDVYTFGPTFRAENSNTSRHLAEFWMVEPEIAFADLKDNIDLAEDYLKYCVQYAMDHCTEDLEFFNKNVEKGLLERLNSTVESPFVRISYTDAVELLLQPEHLKKGKFSVKPVWGTDFGSEHERYLTETVYKKPVVIFDYPKEFKSFYMRLNDDNKTVAAADVLVPNVGEIIGGSAREERLDVLEARIRESGANPEDYKWYLELRKYGSVPHAGFGLGFERLVRYVTGIENIRDVIPFPRWPGNASF 495          
The following BLAST results are available for this feature:
BLAST of NO24G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24295.12.600e-20180.18asparaginyl-trna synthetase [Nannochloropsis gadit... [more]
CBJ25847.15.100e-14159.68Asparaginyl-tRNA Synthetase [Ectocarpus siliculosu... [more]
OEU08414.17.300e-14058.09Asparaginyl-tRNA synthetase [Fragilariopsis cylind... [more]
XP_012899431.11.100e-13858.76uncharacterized protein [Blastocystis hominis] >CB... [more]
XP_014529913.18.400e-13657.14asparagine tRNA ligase [Blastocystis sp. subtype 4... [more]
OAO16177.12.700e-13455.99asparaginyl-tRNA synthetase [Blastocystis sp. ATCC... [more]
XP_009530416.12.300e-13357.70hypothetical protein PHYSODRAFT_354926 [Phytophtho... [more]
XP_008899635.18.700e-13356.78asparagine-tRNA ligase [Phytophthora parasitica IN... [more]
CCI42381.11.900e-13255.73unnamed protein product [Albugo candida][more]
OWZ18642.12.500e-13257.01Asparaginyl-tRNA synthetase [Phytophthora megakary... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL041nonsL041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL039nonsL039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR082ngnoR082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR026ngnoR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00500.1NO24G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598099gene_7280Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00500.1NO24G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00500 ID=NO24G00500|Name=NO24G00500|organism=Nannochloropsis oceanica|type=gene|length=1454bp
ATGTCGATGCAGGCGGTATTGGAGGTGGAGAAGACGGAGGGGTTCGAGTT
TGCTACTCCTGCGAACTGTGGGGGTGTGGGCGCATCGTTCGAGATAACAG
GGATGCTGGTCAAGAGCCCGGCGAAAGGACAAGAGATGGAATTGCATGCC
ACGCAGGTGGTGGTGTTGGGCAAGGTATATGGAGGGGACAATGGGGAGGT
AGGGGGAAAGCTTTACCCTTTGAGTAAGAAGGCCCACTCGATGGAGTTCT
TGAGAGCGAACGCCCATTTGCGCGCCCGGACCCGAGTGACAAGTAGTGTG
ATGCGCGTGCGTCATGCCATGGCCTATGCGACTCACAAATTTTTCAATGA
CCGCGGGTTTAAGTATGTGCATACACCATTGATCACGGGGGCAGATTGCG
AGGGGGCGGGGGAGATGTTCACCGTCACGACGCTTTTGCCGGACAAAGGG
TCTCCGAAGCTCCCGACCTTGCCAGACGGCTCTATTGATTTTTCGAAAGA
TTTCTTTGGGAAACGGACGAGCTTAACGGTCTCGGGGCAGTTGAATGTGG
AAACATATGCATGCGGTTTATCGGATGTGTATACGTTTGGGCCGACGTTC
CGAGCGGAGAATTCGCATACGACGAGGCACTTAGCAGAGTTCTGGATGAT
CGAGCCTGAGATAGCCTTTGCCGATTTGGACATGGACATGGCCTTGGCGG
AGGATTACTTAAAGTATTgtgtgtggtacgcactcacgcacaacgaggac
gacttggtcttgctggagaaagtcccgggggggagatgggcttgagggac
cgactgaggaatgtgctcgagaatccgttcgtccgcatcacatatacagA
GGCAGTGGCGATTCTGGAGAAAGACTTGGCGTCGAAGAAGgtgagcggac
ggaatgggagtgggcattaagagatgttgctggtgccctacccccaaacc
caaaaaatatataccgacactcctaactcaccttaatccaattgctatca
atatcacacacccactcttgcccagGTCAAGTTCGAAGTGAAGCCCGAGT
GGGGCTGCGACTTGGGGAGTGAGCACGAGCGGTACCTGACGGAACAAGTA
TACCGGCGACCGGTGATCGTCACCAACTACCCCAAGGATATCAAGGCCTT
TTACATGCGCTTGGACGAGGGGGGAAAGACGGTGTCAGCCATGGACATCC
TGGTGCCCAAGATTGGCGAGATCATAGGTGGGTCCCAGCGTGAAGAGCGC
TTGGACGTGCTGAAGGCACGGTGCCTCGAGATGGGGCTGGAGGAGGAGGC
GTTGTGGTGGTACTTGGAGTTGAGGAAGTATGGCTCGCATAAACACGCGG
GTTTTGGGTTGGGCTTTGAGCGTTTGATTTTATTTGTAACGGGTCTAGAG
AATATCCGAGATGTGATTCCGTTCCCGCGTTTCCCGGCGCACGCCGAGTT
TTGA
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protein sequence of NO24G00500.1

>NO24G00500.1-protein ID=NO24G00500.1-protein|Name=NO24G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=396bp
MSMQAVLEVEKTEGFEFATPANCGGVGASFEITGMLVKSPAKGQEMELHA
TQVVVLGKVYGGDNGEVGGKLYPLSKKAHSMEFLRANAHLRARTRVTSSV
MRVRHAMAYATHKFFNDRGFKYVHTPLITGADCEGAGEMFTVTTLLPDKG
SPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYACGLSDVYTFGPTF
RAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLKY*AVAILEKDLA
SKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKAFYMRLD
EGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEEALWWYL
ELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAEF*
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Synonyms
Publications