NO24G00380, NO24G00380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00380 vs. NCBI_GenBank
Match: EWM24322.1 (ribosomal rna assembly protein mis3 [Nannochloropsis gaditana]) HSP 1 Score: 456.4 bits (1173), Expect = 2.000e-124 Identity = 227/246 (92.28%), Postives = 235/246 (95.53%), Query Frame = 0 Query: 57 MPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQEVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRKM 303 MPGPLLEESSFATLFPKYREKYLREVWP VTRALEKVGV CELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAV+VLED+VACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGC+ILVQGNTVA MG +KGIK VR VVVDCMKN+HPIYHIKTLMIKRELAKDPTLA+ENWDRFLPQFKKKNVPR KPQ VR KKAYTPFPPPQ PSK+DLQLESGEYFLTE QRK+ Sbjct: 1 MPGPLLEESSFATLFPKYREKYLREVWPVVTRALEKVGVACELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVKVLEDEVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCFILVQGNTVAAMGPYKGIKLVRNVVVDCMKNIHPIYHIKTLMIKRELAKDPTLAQENWDRFLPQFKKKNVPRHKPQVVRPKKAYTPFPPPQQPSKIDLQLESGEYFLTEQQRKL 246
BLAST of NO24G00380 vs. NCBI_GenBank
Match: KXZ55951.1 (hypothetical protein GPECTOR_2g1502 [Gonium pectorale]) HSP 1 Score: 439.5 bits (1129), Expect = 2.500e-119 Identity = 207/275 (75.27%), Postives = 244/275 (88.73%), Query Frame = 0 Query: 32 RYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQEV-----RVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRK 302 ++RREKPWDH GIDHWK + +KPE P LLEESSFATLFPKYREKYLREVWPAVT+AL+ VG+GCELN++EGSMTVRTTRKT DPY ++KARDLIKLLARS+P QA+++L+DD+ CDIIKI GI+RNKE+FVKRRQRL+GP+G+TLKALELLTGCY+LVQGNTVATMG +KG+KQ+R++V DC+KNVHPIYHIKTLMIKRELAKDP LAEENW+RFLP+FKKKNV R+KP+ KK YTPFPPP PPSK+DL LESGEYFL+E Q++ Sbjct: 27 KHRREKPWDHDGIDHWKVDPFKPEDNPNGLLEESSFATLFPKYREKYLREVWPAVTKALKDVGIGCELNLVEGSMTVRTTRKTWDPYAIIKARDLIKLLARSVPAPQALKILQDDMQCDIIKISGIIRNKEKFVKRRQRLIGPNGSTLKALELLTGCYMLVQGNTVATMGPYKGLKQIRRIVEDCVKNVHPIYHIKTLMIKRELAKDPALAEENWERFLPKFKKKNVKRKKPEVADKAAGEKKKVYTPFPPPMPPSKLDLALESGEYFLSEEQKR 301
BLAST of NO24G00380 vs. NCBI_GenBank
Match: PNW74826.1 (hypothetical protein CHLRE_12g508200v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 434.9 bits (1117), Expect = 6.100e-118 Identity = 212/301 (70.43%), Postives = 253/301 (84.05%), Query Frame = 0 Query: 13 DQEDQRQEDEKEAPRSG---KKRYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQ---------EVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRK 302 + E Q + AP G K ++RREKPWDH GIDHWK + +KPE P LLEESSFATLFPKYREKYLREVWPAVT+AL+ +G+GCELN++EGSMTVRTTRKT DPY ++KARDLIKLLARS+P QA+++L+DD+ CDIIKI GI+RNKE+FVKRRQRL+GP+G+TLKALELLTGCY+LVQGNTV+ MG +KG+KQ+R++V DC+KNVHPIYHIKTLMIKRELAKDP LAEENWDRFLP+FKKKNV R+KP+ + KK YTPFPPP PPSK+DLQLESGEYFL+E Q++ Sbjct: 4 EPETAEQPAGEVAPSEGGKKKGKHRREKPWDHDGIDHWKVDAFKPEDNPNGLLEESSFATLFPKYREKYLREVWPAVTKALKDMGIGCELNLVEGSMTVRTTRKTWDPYAIIKARDLIKLLARSVPAPQALKILQDDMQCDIIKISGIIRNKEKFVKRRQRLIGPNGSTLKALELLTGCYMLVQGNTVSAMGPYKGLKQLRRIVEDCIKNVHPIYHIKTLMIKRELAKDPALAEENWDRFLPKFKKKNVKRKKPEAKPADEAGGKEAAKKVYTPFPPPMPPSKMDLQLESGEYFLSEEQKR 304
BLAST of NO24G00380 vs. NCBI_GenBank
Match: XP_005846376.1 (hypothetical protein CHLNCDRAFT_58322 [Chlorella variabilis] >EFN54274.1 hypothetical protein CHLNCDRAFT_58322 [Chlorella variabilis]) HSP 1 Score: 428.3 bits (1100), Expect = 5.700e-116 Identity = 209/286 (73.08%), Postives = 248/286 (86.71%), Query Frame = 0 Query: 15 EDQRQEDEKEAPRSGKKRYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQEVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQR 301 E+Q D + PR K +++++KPWDH GIDHWK E +K E P LLEESSFATLFPKYREKYLREVWPAVT+AL++ G+ CELN++EGSMTVRTTRKT DP++++KARDLIKLLARS A++VLED+V CD+IKIGGIVRNKE+FVKRRQRL+GP+GATLKALELLTGCYILVQGNTV+ MG +KG+KQVR++V DC++NVHPIYHIKTLMIKRELAKDP LAEENW+RFLP FKKKNV R+KP++VR +K YTPFPPPQPPSK DL LESGEYFL+ Q+ Sbjct: 12 EEQHAADGERPPRK-KGKHKKDKPWDHEGIDHWKIEPFKKEDNPSGLLEESSFATLFPKYREKYLREVWPAVTKALKEQGIACELNLVEGSMTVRTTRKTYDPFIILKARDLIKLLARS-----ALKVLEDEVQCDVIKIGGIVRNKEKFVKRRQRLIGPNGATLKALELLTGCYILVQGNTVSAMGDYKGLKQVRRIVEDCVRNVHPIYHIKTLMIKRELAKDPALAEENWERFLPNFKKKNVQRKKPKKVRERKDYTPFPPPQPPSKEDLMLESGEYFLSAEQK 291
BLAST of NO24G00380 vs. NCBI_GenBank
Match: XP_008876312.1 (hypothetical protein H310_11407 [Aphanomyces invadans] >ETV95139.1 hypothetical protein H310_11407 [Aphanomyces invadans]) HSP 1 Score: 421.4 bits (1082), Expect = 7.000e-114 Identity = 204/282 (72.34%), Postives = 240/282 (85.11%), Query Frame = 0 Query: 23 KEAPRSGKKRYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQEVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRKMKK 305 ++AP+S K++R++KPWD I HWK E WK E +LEESSFATLFPKYREKYLREVWP VT+AL+ V + CELN+IEGSMTVRTTRKT+DPY+V+KARDLIKLLARSIPV QAV++L+D+V CDIIKIGG+VRNKERFVKRRQRLVGPDGATLKA+ELLT CY+LVQGNTV+ MG + G++ VRK+V DC +NVHPIY+IKTLMIKREL+KDP LA ENWDRFLP FKKKNV +KP VR KKAYTPFPP PSK+D ++ESGEYF+ EH+RK K Sbjct: 4 EDAPKS--KKHRKDKPWDSDDIAHWKVESWKDEDNKSGMLEESSFATLFPKYREKYLREVWPIVTKALDSVKIACELNLIEGSMTVRTTRKTTDPYIVLKARDLIKLLARSIPVNQAVKILDDEVQCDIIKIGGLVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYGGLRHVRKIVEDCFQNVHPIYNIKTLMIKRELSKDPKLAGENWDRFLPVFKKKNVQTKKPHVVREKKAYTPFPPAPTPSKIDKEIESGEYFMKEHERKAMK 283
BLAST of NO24G00380 vs. NCBI_GenBank
Match: XP_007508899.1 (ribosomal RNA assembly protein mis3 [Bathycoccus prasinos] >CCO19985.1 ribosomal RNA assembly protein mis3 [Bathycoccus prasinos]) HSP 1 Score: 421.0 bits (1081), Expect = 9.100e-114 Identity = 200/285 (70.18%), Postives = 244/285 (85.61%), Query Frame = 0 Query: 20 EDEKEAPRSGKKRYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQEVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRKMKK 305 E+E+E + K RYRREKPWDHAGIDHW ++ E P LL+ESSFATLFPKYREKYLR+VWP++T+AL+ VGVGCELN++EGSMTVRTTRKT DPY+++KARDLIKLL+RS+P QA++VL DD CD+IKIGG+VRNKERFVKRRQRLVGP+G+TLKA+E+LT CY+L+QGNTV+ MGSFKG+K RK+V D MKNVHPIYHIK LMIKREL KDP L ++WDRFLP+FKKKNV R+KP+ V+ KKA + FPP Q PSK+DLQ+ESGEYFL++ ++MKK Sbjct: 13 EEEQEQNQGKKGRYRREKPWDHAGIDHWDVPKFTKEDNPHGLLDESSFATLFPKYREKYLRDVWPSITKALKDVGVGCELNLVEGSMTVRTTRKTWDPYIIIKARDLIKLLSRSVPAPQALKVLSDDTQCDVIKIGGLVRNKERFVKRRQRLVGPNGSTLKAIEMLTDCYVLIQGNTVSAMGSFKGLKTCRKIVEDAMKNVHPIYHIKELMIKRELEKDPELKNQSWDRFLPKFKKKNVKRKKPEYVKEKKARSVFPPAQMPSKIDLQIESGEYFLSQEAKQMKK 297
BLAST of NO24G00380 vs. NCBI_GenBank
Match: EWM24299.1 (hypothetical protein Naga_100047g10 [Nannochloropsis gaditana]) HSP 1 Score: 421.0 bits (1081), Expect = 9.100e-114 Identity = 231/403 (57.32%), Postives = 273/403 (67.74%), Query Frame = 0 Query: 437 AGDRLSCAGCVKNTLYYKQQAVAYKKLALRDAYEQAKVVLTGRQPIFEEEQAVADLTRRQGEMRRRLQETAESVRDLRIALARKTXXXXXXXXXXXXXXXXXXXXXXQQESQSFPVLKGLEWYREQAMEALRQRMWTRVLEHFVIFPIEADVPGLVR------------PPSLPPSLSASSSKQNQPQQLQSRGRHFHNSNLLPGVSTIAGLPVPNSGLYSELGLPDEVCEAALYLVARVTWSLANTLGVELPHPLRFPAGKPYALVMEDGKGRTEFALSPSIYASSSTTTTNSTNSIGRSRHTPLIIKRDCGRE---EEGTDPFSLALEALQFNVHRLAISPTAVGVDASELFGKEALLLNLWAIQRQAARVVKAYEGFPDVPLPQLKEGRRGERKEAEVRG 825 A D LSC+GCVKN LYYKQQA+AYKK++LRDAYEQAK VLT QP+F E+QA+A L RRQGE++ RLQETAE VRDLR+A+ARKT Q SQS PV +GL WY+EQ ME ++QR+WTRVLEHFV+FPIEAD+P V PP PPS +++ K L GVSTI GLP+PN+G Y ELGLPDEVCE ALYLVARVTWSLA TLG+ LPHPLRFPAGK YAL+ ED + RTEFALSPS Y +N+T++ RH P R G E +GTDPFSL +EALQ NVH+LA+SP VGVDA EL+GKEA+LLNLWA+QR+AA VVKAYEG PDVPLP+++ GR + E G Sbjct: 12 AADGLSCSGCVKNNLYYKQQAIAYKKMSLRDAYEQAKSVLTTNQPVFREQQALAALMRRQGELKTRLQETAERVRDLRLAVARKTFALEERRKAVDVARQRLEEVKRWQGSQSTPVQQGLRWYKEQTMEVVQQRVWTRVLEHFVVFPIEADIPVHVSGKGTQEQAPAFIPPPCPPSRASAGPKP------------------LTGVSTIVGLPLPNAGNYRELGLPDEVCETALYLVARVTWSLAETLGMRLPHPLRFPAGKSYALIAEDAQRRTEFALSPSFYHGGG--RSNATSTAPAYRHPP---SRRRGAECAGADGTDPFSLGVEALQLNVHQLAVSPAGVGVDARELWGKEAVLLNLWAVQRRAAEVVKAYEGLPDVPLPRVERGRMEGKAEGATGG 391
BLAST of NO24G00380 vs. NCBI_GenBank
Match: XP_012194417.1 (hypothetical protein SPRG_00811 [Saprolegnia parasitica CBS 223.65] >KDO34750.1 hypothetical protein SPRG_00811 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 419.9 bits (1078), Expect = 2.000e-113 Identity = 202/281 (71.89%), Postives = 238/281 (84.70%), Query Frame = 0 Query: 24 EAPRSGKKRYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQEVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRKMKK 305 E P+S K++R++KPWD A + HWK ++WK E P +LEESSFATLFPKYREKYLREVWP VT+AL+ + CELN+IEGSMTVRTT+KTSDPY+V+KARDLIKLLARSIPV QA+++LED+V CDIIKIGG+VRNKERFVKRRQRLVGPDGATLKA+ELLT CY+LVQGNTV+ MG + G++ VRK+V DC NVHPIY+IKTLMIKREL+KDP L ENWDRFLP FKKKNV +KP VR K+ YTPFPP Q PSKVD ++ESGEYF+ EH+RK K Sbjct: 3 EPPKS--KKHRKDKPWDTADVAHWKVDQWKDEENPTGMLEESSFATLFPKYREKYLREVWPIVTKALDAFKIVCELNLIEGSMTVRTTKKTSDPYIVLKARDLIKLLARSIPVNQAIKILEDEVQCDIIKIGGLVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYSGLRHVRKIVEDCFHNVHPIYNIKTLMIKRELSKDPALQGENWDRFLPVFKKKNVQTKKPHTVREKREYTPFPPAQMPSKVDKEIESGEYFMKEHERKAMK 281
BLAST of NO24G00380 vs. NCBI_GenBank
Match: XP_017993172.1 (ribosomal rna assembly protein mis3 [Malassezia pachydermatis] >KOS15540.1 ribosomal rna assembly protein mis3 [Malassezia pachydermatis]) HSP 1 Score: 418.7 bits (1075), Expect = 4.500e-113 Identity = 197/282 (69.86%), Postives = 241/282 (85.46%), Query Frame = 0 Query: 20 EDEKEAPRSGKKRYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQEVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRK 302 ED AP + KR+R++KPWD IDHW+ +++ E P P LEESSFATLFPKYREKYLRE+W VT ALEK GV C L+++EGSM+VRTTRKT DPY++++ARDLIKLL+RS+P QAV++L+DD+ACD+IKIG IVRNKERFVKRRQRL+GP+G TLKA+ELLTGCY+LVQGNTV+ MGS+K +K+VR++V+DCMKN+HPIYHIK LMIKRELAKDP LA E+WDRFLP+FKK+NV +KP+E KK YTPFPPPQ PSK+DLQLESGEYFL H++K Sbjct: 4 EDNASAPMNKNKRFRKDKPWDTDDIDHWRIDKFTQEDNPHPFLEESSFATLFPKYREKYLREIWGHVTTALEKHGVACTLDLVEGSMSVRTTRKTFDPYIILRARDLIKLLSRSVPFTQAVKILQDDMACDVIKIGNIVRNKERFVKRRQRLIGPNGNTLKAIELLTGCYVLVQGNTVSAMGSYKSLKEVRRIVLDCMKNIHPIYHIKELMIKRELAKDPKLATESWDRFLPKFKKQNVKTKKPKETPKKKEYTPFPPPQQPSKIDLQLESGEYFLKPHEKK 285
BLAST of NO24G00380 vs. NCBI_GenBank
Match: XP_001690845.1 (predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 417.5 bits (1072), Expect = 1.000e-112 Identity = 203/289 (70.24%), Postives = 242/289 (83.74%), Query Frame = 0 Query: 32 RYRREKPWDHAGIDHWKAEEWKPEYMPGPLLEESSFATLFPKYREKYLREVWPAVTRALEKVGVGCELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARS-IP---------VQQAVRVLEDDVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVATMGSFKGIKQVRKVVVDCMKNVHPIYHIKTLMIKRELAKDPTLAEENWDRFLPQFKKKNVPRQKPQ---------EVRVKKAYTPFPPPQPPSKVDLQLESGEYFLTEHQRK 302 ++RREKPWDH GIDHWK + +KPE P LLEESSFATLFPKYREKYLREVWPAVT+AL+ +G+GCELN++EGSMTVRTTRKT DPY ++KARDLIKLLARS +P + ++ +DD+ CDIIKI GI+RNKE+FVKRRQRL+GP+G+TLKALELLTGCY+LVQGNTV+ MG +KG+KQ+R++V DC+KNVHPIYHIKTLMIKRELAKDP LAEENWDRFLP+FKKKNV R+KP+ + KK YTPFPPP PPSK+DLQLESGEYFL+E Q++ Sbjct: 1 QHRREKPWDHDGIDHWKVDAFKPEDNPNGLLEESSFATLFPKYREKYLREVWPAVTKALKDMGIGCELNLVEGSMTVRTTRKTWDPYAIIKARDLIKLLARSEVPSADVLSACALAVSISTQQDDMQCDIIKISGIIRNKEKFVKRRQRLIGPNGSTLKALELLTGCYMLVQGNTVSAMGPYKGLKQLRRIVEDCIKNVHPIYHIKTLMIKRELAKDPALAEENWDRFLPKFKKKNVKRKKPEAKPADEAGGKEAAKKVYTPFPPPMPPSKMDLQLESGEYFLSEEQKR 289 The following BLAST results are available for this feature:
BLAST of NO24G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00380 ID=NO24G00380|Name=NO24G00380|organism=Nannochloropsis oceanica|type=gene|length=4166bpback to top protein sequence of NO24G00380.1 >NO24G00380.1-protein ID=NO24G00380.1-protein|Name=NO24G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=890bpback to top Synonyms
Publications
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