NO24G00280, NO24G00280 (gene) Nannochloropsis oceanica

Overview
NameNO24G00280
Unique NameNO24G00280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4117
Alignment locationchr24:89748..93864 +

Link to JBrowse

Properties
Property NameValue
DescriptionCK2 alpha subunit
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:89748..93864 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_003728583.1 (PREDICTED: casein kinase II subunit alpha isoform X2 [Strongylocentrotus purpuratus] >BAA92346.1 CK2 alpha subunit [Hemicentrotus pulcherrimus])

HSP 1 Score: 177.9 bits (450), Expect = 6.700e-41
Identity = 88/200 (44.00%), Postives = 137/200 (68.50%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTS---TFRQALLLEYL-GPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++IL+ LRGGPNIIAL+       +   AL+ EY+   + + L    +D    EIR+++FELL+AL ++H+ G++HRDVK  NV+I+ + ++LRLIDWG A+ +  GQ +NV V++R FK PELL+    Y   +D+W +GC+LA ++F++EPFF G ++ DQL R+A VLG+  L +Y  K  I+
Sbjct:   66 KILKPVKKKKIKREIKILENLRGGPNIIALQAIVKDPVSRTPALIFEYVNNTDFKQLYQTLKDY---EIRYYLFELLKALDYSHSMGIMHRDVKPHNVMIDHENRRLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQLYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTDELYEYLDKYQIE 262          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_785475.4 (PREDICTED: casein kinase II subunit alpha isoform X1 [Strongylocentrotus purpuratus])

HSP 1 Score: 177.9 bits (450), Expect = 6.700e-41
Identity = 88/200 (44.00%), Postives = 137/200 (68.50%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTS---TFRQALLLEYL-GPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++IL+ LRGGPNIIAL+       +   AL+ EY+   + + L    +D    EIR+++FELL+AL ++H+ G++HRDVK  NV+I+ + ++LRLIDWG A+ +  GQ +NV V++R FK PELL+    Y   +D+W +GC+LA ++F++EPFF G ++ DQL R+A VLG+  L +Y  K  I+
Sbjct:   66 KILKPVKKKKIKREIKILENLRGGPNIIALQAIVKDPVSRTPALIFEYVNNTDFKQLYQTLKDY---EIRYYLFELLKALDYSHSMGIMHRDVKPHNVMIDHENRRLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQLYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTDELYEYLDKYQIE 262          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_022255767.1 (casein kinase II subunit alpha isoform X3 [Limulus polyphemus])

HSP 1 Score: 177.9 bits (450), Expect = 6.700e-41
Identity = 88/199 (44.22%), Postives = 136/199 (68.34%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTS---TFRQALLLEYLGPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++IL+ LRGGPNIIAL        +   AL+ E++  +   L    + L+  +IRF+++ELL+AL + H+ GV+HRDVK  NV+I+ +T++LRLIDWG A+ +  GQ +NV V++R FK PELL+    Y   +D+W +GC+LA ++F++EPFF G ++ DQL R+A VLG+  L +Y  K  I+
Sbjct:   66 KILKPVKKKKIKREIKILENLRGGPNIIALNAVVKDPVSRTPALIFEHVNNKDFKL---YQTLTDYDIRFYLYELLKALDYCHSMGVMHRDVKPHNVMIDHETRRLRLIDWGLAEFYHSGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELYEYLDKYQIE 261          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_009692158.1 (uncharacterized protein TOT_040000929 [Theileria orientalis strain Shintoku] >BAM41857.1 uncharacterized protein TOT_040000929 [Theileria orientalis strain Shintoku])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 85/199 (42.71%), Postives = 136/199 (68.34%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTSTFRQ---ALLLEYLGPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++ILQ L+GGPNIIAL       +    +L+ E +  +   + + E   ++ +I++++F+LLRA+ + H+RG++HRDVK  NV+I+   + L+LIDWG A+ +  GQ ++V V+TR +K PELL+ N +Y   +D+W +GC+LAGL+FKREPFF G ++ DQL ++A VLG+  L  Y  K  I+
Sbjct:  156 KILKPVKKKKIKREIKILQILKGGPNIIALLDIVKDPQSRIPSLVFELVKNKDYKVLYPE--FTVYDIKYYIFQLLRAINYCHSRGIMHRDVKPHNVMIDHDARSLKLIDWGLAEFYHPGQEYSVRVATRYYKSPELLVDNKYYDYSLDIWSIGCMLAGLIFKREPFFYGHDNYDQLVKIAKVLGTDDLFAYSQKFGIE 352          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_013787505.1 (casein kinase II subunit alpha isoform X1 [Limulus polyphemus] >ANO53976.1 CKII_alpha [Limulus polyphemus])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 87/199 (43.72%), Postives = 135/199 (67.84%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTS---TFRQALLLEYLGPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++IL+ LRGGPNIIAL        +   AL+ E++    +      + L+  +IRF+++ELL+AL + H+ GV+HRDVK  NV+I+ +T++LRLIDWG A+ +  GQ +NV V++R FK PELL+    Y   +D+W +GC+LA ++F++EPFF G ++ DQL R+A VLG+  L +Y  K  I+
Sbjct:   66 KILKPVKKKKIKREIKILENLRGGPNIIALNAVVKDPVSRTPALIFEHV--NNKDFKQLYQTLTDYDIRFYLYELLKALDYCHSMGVMHRDVKPHNVMIDHETRRLRLIDWGLAEFYHSGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELYEYLDKYQIE 262          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_013787507.1 (casein kinase II subunit alpha isoform X2 [Limulus polyphemus])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 87/199 (43.72%), Postives = 135/199 (67.84%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTS---TFRQALLLEYLGPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++IL+ LRGGPNIIAL        +   AL+ E++    +      + L+  +IRF+++ELL+AL + H+ GV+HRDVK  NV+I+ +T++LRLIDWG A+ +  GQ +NV V++R FK PELL+    Y   +D+W +GC+LA ++F++EPFF G ++ DQL R+A VLG+  L +Y  K  I+
Sbjct:   66 KILKPVKKKKIKREIKILENLRGGPNIIALNAVVKDPVSRTPALIFEHV--NNKDFKQLYQTLTDYDIRFYLYELLKALDYCHSMGVMHRDVKPHNVMIDHETRRLRLIDWGLAEFYHSGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELYEYLDKYQIE 262          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_013787508.1 (casein kinase II subunit alpha isoform X4 [Limulus polyphemus])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 87/199 (43.72%), Postives = 135/199 (67.84%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTS---TFRQALLLEYLGPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++IL+ LRGGPNIIAL        +   AL+ E++    +      + L+  +IRF+++ELL+AL + H+ GV+HRDVK  NV+I+ +T++LRLIDWG A+ +  GQ +NV V++R FK PELL+    Y   +D+W +GC+LA ++F++EPFF G ++ DQL R+A VLG+  L +Y  K  I+
Sbjct:   66 KILKPVKKKKIKREIKILENLRGGPNIIALNAVVKDPVSRTPALIFEHV--NNKDFKQLYQTLTDYDIRFYLYELLKALDYCHSMGVMHRDVKPHNVMIDHETRRLRLIDWGLAEFYHSGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELYEYLDKYQIE 262          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: PVC56795.1 (hypothetical protein MACJ_00001876 [Theileria orientalis])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 85/199 (42.71%), Postives = 137/199 (68.84%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTSTFRQ---ALLLEYLGPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDIQ 412
            K+L+PV   +++RE++ILQ LRGGPNII L       +    +L+ E +      + +     ++ +I++++F+LLRA+ + H+RG++HRDVK  NV+I+ ++K L+LIDWG A+ +   Q ++V V+TR +K PELL+   +Y   +D+W +GC+LAGL+FKREPFF G+++ DQL ++A VLG+ GL QY  K +I+
Sbjct:  154 KILKPVKKKKIKREIKILQNLRGGPNIIELLDIVKDPQSRIPSLVFELVKNTDYKVLY--PTFTIMDIKYYMFQLLRAINYCHSRGIMHRDVKPHNVMIDHESKSLKLIDWGLAEFYHPAQEYSVRVATRYYKGPELLVDMKYYDYSLDIWSIGCMLAGLIFKREPFFYGLDNYDQLVKIAKVLGTDGLYQYTQKYNIE 350          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_018564072.1 (casein kinase II subunit alpha isoform X1 [Anoplophora glabripennis])

HSP 1 Score: 176.4 bits (446), Expect = 2.000e-40
Identity = 87/204 (42.65%), Postives = 135/204 (66.18%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNII---ALRGRTSTFRQALLLEYLGPEARPLGHGEE------DLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDI 411
            K+L+PV   +V+RE++IL+ L+GGPNI+   A+ G   T   AL+ E        + H E+       LS S+ +F+++E+LRAL + H+RG++HRDVK  N++++ + +++RLIDWG AD +  GQ +NV V++R FK PELL+   FY   +D+W +GC+ A +LF++EPFF G ++ DQL R+  VLG+  LN Y  K +I
Sbjct:  116 KMLKPVRKRKVKREIKILECLKGGPNIVKLLAVVGIPHTDLHALIFE-------QMVHHEDFKNIYLKLSESDTKFYLYEVLRALEYCHSRGIMHRDVKPHNIIVDQENRKIRLIDWGLADFYHPGQEYNVRVASRYFKGPELLVDYGFYDYSLDMWSLGCVFASMLFRKEPFFHGNDNYDQLVRIVKVLGTAELNTYLKKYNI 312          
BLAST of NO24G00280 vs. NCBI_GenBank
Match: XP_018564073.1 (casein kinase II subunit alpha isoform X2 [Anoplophora glabripennis])

HSP 1 Score: 176.4 bits (446), Expect = 2.000e-40
Identity = 87/204 (42.65%), Postives = 135/204 (66.18%), Query Frame = 0
Query:  216 KVLRPVPLWRVEREVRILQWLRGGPNII---ALRGRTSTFRQALLLEYLGPEARPLGHGEE------DLSLSEIRFFVFELLRALAWTHARGVIHRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELLLQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTGLNQYKGKCDI 411
            K+L+PV   +V+RE++IL+ L+GGPNI+   A+ G   T   AL+ E        + H E+       LS S+ +F+++E+LRAL + H+RG++HRDVK  N++++ + +++RLIDWG AD +  GQ +NV V++R FK PELL+   FY   +D+W +GC+ A +LF++EPFF G ++ DQL R+  VLG+  LN Y  K +I
Sbjct:   91 KMLKPVRKRKVKREIKILECLKGGPNIVKLLAVVGIPHTDLHALIFE-------QMVHHEDFKNIYLKLSESDTKFYLYEVLRALEYCHSRGIMHRDVKPHNIIVDQENRKIRLIDWGLADFYHPGQEYNVRVASRYFKGPELLVDYGFYDYSLDMWSLGCVFASMLFRKEPFFHGNDNYDQLVRIVKVLGTAELNTYLKKYNI 287          
The following BLAST results are available for this feature:
BLAST of NO24G00280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_003728583.16.700e-4144.00PREDICTED: casein kinase II subunit alpha isoform ... [more]
XP_785475.46.700e-4144.00PREDICTED: casein kinase II subunit alpha isoform ... [more]
XP_022255767.16.700e-4144.22casein kinase II subunit alpha isoform X3 [Limulus... [more]
XP_009692158.11.100e-4042.71uncharacterized protein TOT_040000929 [Theileria o... [more]
XP_013787505.11.100e-4043.72casein kinase II subunit alpha isoform X1 [Limulus... [more]
XP_013787507.11.100e-4043.72casein kinase II subunit alpha isoform X2 [Limulus... [more]
XP_013787508.11.100e-4043.72casein kinase II subunit alpha isoform X4 [Limulus... [more]
PVC56795.11.100e-4042.71hypothetical protein MACJ_00001876 [Theileria orie... [more]
XP_018564072.12.000e-4042.65casein kinase II subunit alpha isoform X1 [Anoplop... [more]
XP_018564073.12.000e-4042.65casein kinase II subunit alpha isoform X2 [Anoplop... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR030ncniR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00280.1NO24G00280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00280.1NO24G00280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00280 ID=NO24G00280|Name=NO24G00280|organism=Nannochloropsis oceanica|type=gene|length=4117bp
ATGACCACCACGCAAAGGATGGCAACAATGGCGATGATAAgtacgcggtg
gtggatgtcttgttatgatatccgcgttagcgtaatgctacggtgccagt
agtgtggtggcccaaagaagaccatctccgtaacagacaaaacgtgcacg
agacgactcttttctcccaccgagaaatgaacgaaaacataacaccacct
acgcctgcgcagccgaaaaggcgtcgagctgaagggaaagatgccgatcc
tggagctgaagaaggccttccttcgtggcgggcaaaagcaacacttcctt
tccattctacttttgttccatgcgatagacctcctctccctcccctccct
cctcccctcccacaacacacacaggcagcccacacatggtcatacgtaca
tcaagcatcaatattggaatgatgcctggctccattttcacacgaccgca
aacaacatactagcctggtttaccagtcttcccttctcttatcccatgac
tacatcctcctcctccccaactccctgccccatctcctctccctccttca
tctcctcttcacgaagcatgtgcatcccctcccttcccctctccatcctt
tttctcttcctcctcctactcttcttcgaccctccccttcctcttcctcc
cctgaagGCCACCGCTCAAGCATCTCCCCCCCTCCTTCCACCACCTCAAC
CTCTTTTCCCTCCTCCTCTTCACCTCCATCTGCTCCTCCTCCTCCTCCTC
CTCCTCTCCCCCATCTGTTTCCTTCCACTGCTTCATTGCCCCCCCACCTC
AAGGGACACGAAGTAACGAGAGAAAAAGAGAAAGAGGAGGAGAAGACGGA
GGGTGGAAAGGAAGGGAAAAGGCTTGGGAGGAAAACGAAGCTCGCCGCTC
TCCGGTCCTTGCTCAAACTCCGACGATCACAGAAGAAGGAGGAAAAGGAG
GAGGGAGAGAAAGATCAGGAGGACGAGGAAGGGAGGGAGGACGAGGACGA
GGACGAGGACGAGGAGGCCGAGACGGAAGCGAGGAAGATCATGGAGGGGG
TGAGGAAAGAAGAAAGCGAGTGTGTTCGGGTGAGGGAGAGACTTGGCAGT
GGCAAGTTTTCTGAGgtaggtaggtggagagggagggagggagggaggga
gggagggagggagggaggattggccttcagccgtggcgaatttcccaagg
tgagaaaaggaggggaagaggaagggaaggagggggaaggactgatgcaa
acctttcttcccactcaaatacttatttattcaggtgtttctcgcccgtc
tggtgcgctcctcgtctcgtgctccagCTAGAGGGGGGTGAAGGATCTTT
TGTCGATGCTGGAGAAGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
AAGAAGAAGAAGAAGAAGAGGATAAGGAAGAAAAAGAAGAAGATGCTGAT
GACGATGATGACGTCGTCGTGCTGAAAGTGTTGCGGCCTGTCCCTCTTTG
GCGCGTGGAGCGGGAGgtaaagagggagggagggagggagggagggaggg
agggagggagggagggagggagggagggagggagggtatctcaagtcaac
tctaatttccttattccctctctctttgatgtgcacagGTTCGCATTTTG
CAGTGGTTGCGGGGAGGGCCCAATATCATTGCACTGAGAGGACGCACTTC
GACATTCAGgtaggtagggagggaaggagggaggaagggagggagcgagg
aagggaaagagggcgcaagggagaaagggagaggggaaaaggaggaggga
atggaggggagggaaagagagagggaaggaaggaaggagggcgggagggt
tatatattttatccgctcacacacattataactctctctttcatctctca
cgcactcattctgttgatgtttctcgctctccttcctctgtccgcagGCA
AGCCCTCTTGTTGGAGTACTTAGGGCCAGAAGCCCGGCCGCTAGGCCACG
GGGAAGAAGgtacctccctccctcccctcctccttcctccctccctccct
tcctccctctctccctctctttttgctttcgcgcattcacactccccccc
cttccctctttcccctccctttctccctccctgcctgtctcagATCTCTC
CCTCTCTGAGATCCGCTTCTTCGTTTTTGAGCTCTTGCGGGCGCTGGCCT
GGACGCATGCGAGGGGTGTGATACACAGgtagggaggtagggagggaggg
aggtaggtagggaggagggaggagggagggagggagggagggagaaaggg
acagaggaatacccattcttatgctcccctcctccctcccttcttccctc
tgctcctccatcagAGATGTGAAAAACAAAAATGTCCTCATCAACACCAA
GACAAAACAACTGCGgtacgtcctcctccctccctccctccctccctccc
tccctccctccctcccttgaataccacacgttctccctccctccctccct
cccccctcagCCTGATTGACTGGGGTAGTGCCGATGCTCACTCAGAAGGA
CAATCTCACAATGTCTTCGTCTCCACGCGGAACTTCAAGgtgagggcggg
agggagggcgggagggagggtgggagggagggcgggagcgaaagtgttcg
aatatcaggaggctggacatctctctttcccttcctgcctccctccctcc
ctccctcactcccaaatccacccttggacaactatacccatcccgctccc
tccctccctccctccttccctccctccttcagCCTCCCGAGCTCTTGCTG
CAGAATCCTTTTTATGGCCCTCCAATCGACCTGTGGGGCGTCGGCTGTAT
CCTGGCCGgtagggagggagggagggagggggggggagggagggagggag
gggagggatagtcataatgcacgcacagaggacatgcgtgataaacacgt
tcttatcataacactctgagtttatatatgtatctacatctatatctaca
tctatatctatatctatatcttacacacacatgtatatatacatgcatat
acatatatatacatatatatactttcacacactgagaatatctccgaata
cacacacactctctcttacacaaacacatacacacacatatatatacatg
tacatgatatatacttacacacaatgaggttacatccgaatggaaataaa
catacacataaatacatactatatccatgaataatacactgagggcagGC
CTCCTCTTCAAGCGCGAGCCATTCTTCCGTGGGGTCAACGACAGgtacgt
gcccgccctccccccgtcctccctcccgccctccccccccctccaaatcc
agcagcagcgcaaaaatatttgtggtgaacgtgaaaaaaaaataaaaatt
acaacgctcatatggctctgacactcatccctccatccattcctccctcc
ctccctcccacagGGACCAGCTGCGGCGCGTGGCTTCAGTGTTGGGTTCG
ACGGGGCTTAATCAATACAAAGGCAAATGTGATATTCAACAGCAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAGGAAGGGTA
AGGAGAGAGGGAGGAATGATTACCAAGGCAAAATGTGACATGCACCAGCA
GGAGGAGGAGAAGGAGAACGAGGAGGAAAGAAGGCGTGCGTGAAGAGGAG
GAGGAGGAGGAAGGCACCAGGCCCCTTCCTCGTCTACAAGAGCCGACATG
TGTACGTTTATTCGGCTTGGTTCACCTGTGCCCTCCCTCCCTCCCTCCCT
TCTATCCTCCCTCCCCAGCCCCCTTCCTCGCGAGCCCTGGTCCTCGTTCA
TTAATGACAAAAATCGACATTTGTGTTCGCCTGAAGCGCTGGACCTCCTC
GACGGGCTGCTGCGgtgaggaaggagggagggagggagggagggaagatt
gggccttggagcctcacttgacatacccatacatgccttgataacattca
cagATACGATCAGAGCGAGCGGTTATCGGCAGCTGATGCCATGAAGCACT
CCTTTTTTGCAGAGATGCGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGG
back to top

protein sequence of NO24G00280.1

>NO24G00280.1-protein ID=NO24G00280.1-protein|Name=NO24G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MTTTQRMATMAMISHRSSISPPPSTTSTSFPSSSSPPSAPPPPPPPLPHL
FPSTASLPPHLKGHEVTREKEKEEEKTEGGKEGKRLGRKTKLAALRSLLK
LRRSQKKEEKEEGEKDQEDEEGREDEDEDEDEEAETEARKIMEGVRKEES
ECVRVRERLGSGKFSELEGGEGSFVDAGEERGGGGGGGGGEEEEEEEDKE
EKEEDADDDDDVVVLKVLRPVPLWRVEREVRILQWLRGGPNIIALRGRTS
TFRQALLLEYLGPEARPLGHGEEDLSLSEIRFFVFELLRALAWTHARGVI
HRDVKNKNVLINTKTKQLRLIDWGSADAHSEGQSHNVFVSTRNFKPPELL
LQNPFYGPPIDLWGVGCILAGLLFKREPFFRGVNDRDQLRRVASVLGSTG
LNQYKGKCDIQQQEEEEEEEEEEEEEEGRKGKERGRNDYQGKM*
back to top
Synonyms
Publications