|
|
Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr24 | genome | chr24:82295..89554 - |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO24G00270 vs. NCBI_GenBank
Match: CBN77283.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.4 bits (202), Expect = 5.200e-12 Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 0
Query: 439 VWKETKDLARKAQAQERHDAERRVMRWEEGNRVLGHTAKSHIARPRELLSLSMKEQGPEEGEEQGEGGQEDDHRVLMAPRTPFVGSLWQARKAIDAACAALLAMEEAEESLRNPYLAPPKRREL 563
VW+ETK++A+K + E ++R+ +WE NRVLGH A+S + RPR LL+LS E G E EGG+ VL++ PF LW+AR AI A A+LA E L P KR E+
Sbjct: 487 VWQETKEIAKKVKEDEADAVKKRIRQWESANRVLGHQARSDVHRPRALLALSGGEAGGE--ATPAEGGE-----VLVSEGAPFETHLWRARLAIQRATNAMLAAFELNYLLHLATTPPEKRAEV 603
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00270 ID=NO24G00270|Name=NO24G00270|organism=Nannochloropsis oceanica|type=gene|length=7260bp
ATGGGGCAAGGTCAGGGGAAGCCCGGAGAGGAAGGGGCGACAGACGCAGG
GGAAGGAGGAGAGGAGCAGCAGCAGCAGCAGCAGCAGTCCGCCGATGTGC
ACCAGGCGGACGTAGAGGAAGgtatgcgggaatataaggaaagaatcaag
agtagaaaagagggagggagagggcttttagtgaacagagcgtcctgcga
tgctttgtactgtccaaagcgatgcctcaccccctccctccctcccatac
tccctccctcccttcccttccctttaacacaagATGACCAGCGTAACGAA
GAGACCTTTGCTGCTGGCGAGATTAAGGCACCAGCAGATGTGCCGCTGCC
GGCATTTTTTGGTGACCAGGCGGGCGGAAAGgtaagagagggagggagaa
agggagggagggagggagggagggagttttgtgtggggatgaacgacttc
tagcactcaatttgaccgagtccgcgtcgattccttgaaaacgggaaaca
attatcgtctctttctgtcgaacagaaatatttttatatgtatgtataga
gagagagatcgagatagagatagattatagataggtagatatagatagat
agatagagagtgtgtgtctttgtgtctgtgtgtctgtgtctgtgtctgag
tgtgtctgtatctgtgtgtgtaagtgtgtacgttctttctttacccctac
aatatgagtgacctggcatcccctcctcctccttttcttcttctcttttt
atttcacggtccgatgataaactgcagAAACTGAAAGAAGAAGAGAAGAA
AAAGGACGCCCAGGCCTCGGTGTCGCCGCAGGGGCCGAGGAAGGAGGGGA
GGAGGGAGGGAAGGGCGCACCCTCCCTGCTTTCTTTTACGGCGAAGCGAC
AGCTGCTACTGCTACTGCTCCTGCCATCCCTCCTTCGGGCCCTCCTTCGG
CTCCTCCTTCACGGgtacataacagtgggagagagggaagggcagaaagc
cgggcgtgctggcggacaccagcaccacctatcttccctccttcccatca
tcaccccctgtcttccctccctccccatcatcaccccctgtcttccctca
ctccccatcatcaccccctgtcttccctccctccccatcatcaacccctg
tcttccctccctccccattatcataagTCCCATCTCACAACCATCGACGC
GACGACGGCGGAGGACGACGAATGGGCCAGGCAGCAGGTGGAGTATCAGC
gtgtgcaagaggtccaacgccgtcgcctccaggtatgccttccctccctc
ccttccttttcccctacacaattcataaccctccctccctccttcttgcc
ccattcatatctctctctccctcccttcctcccttcccacagGAGACGCA
GCGACCGGAAGCGTCGGATAGAGGAGGAGGAGAAGGAGGAGGAGGAGGAG
GAGGCGAGGACGGGTGGTCAGCAGTTGAAGCCGACATTGACAAgtacgtc
ctcctctctccctccctccctccctacctccctccctccctccatccctt
cccttcgtccctccctccctccctccctccctacctaccttcctccctcc
ctccctcccttcccttcatcccctccctcactttctccctccctccctac
ctacctccctccctccctccctccctccctccctcccttcccttcgtccc
ctccctcactttctccctaccaacctcccgtcttcccactgtaaatttcg
aatttcatatattctcccctccctctctcccgccctctcagGCTTACCCT
CGATCATGATGATCCTCCTCCTGCGGCGGCTGCTGCTGCTGCTGTTCCTC
CTCCTCCTCCCCCCCCCTCCCACTCCTGCGACACAACCGCAGCCCCTCAC
AGTGTCTCAACTCGAAGGACTGGAGGGAGGGAGGGAGAGAGGGAGGGAGG
GAGGGGACGGAGCTGGGAAGAACATTATGGCCATGCTGATGCATGCGCAG
CAGCAGCAGCAACAGCAACAGCAACAACAACATGCACGAGgtatatcctc
ctccctcccctccttcccacctctcccctccctccttctgatcctccctt
ccctccctccctcctccctcccgtcctccctccctccctcagGCCCCCTT
TTCCTAGGGCCGGTCCTGGCCCCACCAGCACGGCCGAGGCAGCGGCGGAG
GGAGGGAGGGAGGAAGGGGAGGAGGAAGGGGAGGAGgttacccctacccc
cccgtggcgctccccgccctcccttccctcctcatcacatgcacgggcca
ggcgggccgacctatccccctcccctttccccttccctccctctctcctc
ccggcttcggccctcccctcctcctcctcaaccggagGCGTCTGGCTATC
CCTTCCTCCCCCCCCTCCCTCCCCCTCGGGCCTTTCCCCTTCCCTCCTCC
TCCCGGGGCAATATTCGGAGTTCGTCAACGGCCGGTGCCGGCGGGGGAGG
TTATGGCTCCCAAGGAGgtgagggaggggggaagggaggaagggagaggg
tggaacagcgggagtagtagtagtagcagcagttgtagtagtagtagcag
cagcagcagcaggaggaggaggaggaggaggaggaggaggaggaggtgat
aggagggggaggaggtgatagaaagacttttcgtatgacgcccatgtagg
tacccctccctcccccccctcccttccttcctccccctccctcctccctc
cctcccttcctccctccagGTTCTGTACGTCATTCAACAGCAGCTCCGGC
AGCTCGAGACCGTGGATCCATTCACTGACGACTACTACTACGTGATGgtg
ggggagggagggaaggaggaggggcggggggaagggaggaagggagggaa
ggagggaagggagaaggaggaaggaggaaggagggagggagggaagggga
tggcgctgcttgtgagttggatttggatcccactttcttttgcctctttt
tttgcttgtcctaatcataatctatctttctaattcaaatgattggactt
ttctaatcaacgccatcaaaatgtcagGCGCATGCAAAAGAGGAAGACAA
GCGCCGCCAAGACTGGGAGGAGGAGCAGAAGCGAAGGGAAGgtgcgtttc
ttgcctccttccctccctcctccctccctccttccctccctccctccctc
ctccctccttttctccttcccacctttccttccttctttcccatgtcact
ctccctccctccctcctccctccctccttccccctccttcccctcttccc
tccttttctccttcccacctttccttccttctttcccatgtcctctcctc
cctccttccctccctccctccctcgttcccctcctccctccttttctcct
tcccacctttccttcctccttccctccctcctccctcctccttcctcctc
cctccttcccctcctccctccttttctccgtcccacctttccttccttct
ttcccatgtcactctccctccctccctccctccctccctccctcttctct
cgaccccagaggaagaaaagcgagggaacaagaccccagcagtcttcacc
cgcccacccgccctccctccctccctcctccctccctccctccctccttc
ccacagCACCCTCCTCCACAGAGGACGAGAAAGAAAACAGCCGTGGCAGC
GACGAGGAGCTCCAGAGGAGGATGAATAAGGGCGGCAATAATCCCACGCA
GGGAGTGAATAAGCTCGTCGCGCCCGTCTGGAAAGAAACTAAGGATCTTG
CCCGCAAGGCGCAGgtaagggaagcccttccctggctccctcccttcctc
cctttttattcaaaaataacacatttaaaaacataataataataataata
ataaaatcatttgcctctcttccttccctccttccctccctcgctccctc
cctccctccctctgccagGCCCAGGAACGCCACGACGCCGAGCGGCGTGT
GATGAGATGGGAAGAAGGCAATCGCGTCCTCGGGCACACGGCCAAGAGCC
ACATAGCCCGCCCGCGGGAACTGCTGTCCCTGTCGATGAgtaaggaggga
gggagggagggagggaggcagggagggagggagggccgactcgaagattt
catctaagcttaccttctccaataccccttcctccccctccctccctcct
ccccccttcttttccaacagAGGAGCAGGGGCCGGAGGAGGGTGAGGAGC
AGGGTGAGGGAGGCCAGGAAGACGACCACCGTGgtaggtgcttgctcctc
tttccctccctccctcctccctccttccctccctccctccctcctccctc
cctccaactctctctggtttccatgggcccccaacacttcatttggatgc
tgcactgtgtgcggtctaacttatctccctccctccctccctccctccct
ccctccctcctccctcagTCCTGATGGCCCCCCGCACGCCATTTGTGGGT
TCCCTCTGGCAGGCGCGGAAGGCCATCGACGCCGCTTGTGCCGCCCTCCT
CGCTATGGAGGAGGCGGAGGAGAGCTTGCGgtaaggagggagggagagac
ggagggtaaaaaagcgcgaagagagaacccactcagccccttcctccctc
cctccctccctccctcctccctccctccctctcagGAACCCCTACCTAGC
ACCTCCCAAGCGACGAGAGCTCGAAAAACAGGGACTCCACGCCCAGCAAC
AACTCGCTGgtgcgttcctccctcccgccctccctccctcccgcccgccc
tccctctctctctcacctctccccatccgccggccccacacagCTGCCCT
CGATCTTCCGTCTCCCTCCAACGACACCACCACTACCCCTCCCTCCCTCC
ATCCTCCTTCCTCCCCTCCTCCTTGACCTAACCAAGGGCACCCGTGTACT
GGCTCGCGCCGTGCCCGCCCTCCCCCCGCCCTCGGTTACGCCCTCCTTCC
CTCCCTCATTGAGCACCTCGTAGCTCGTCCTCCGCCGCCGCCTACGATCG
AGGCTGGAAAGgtattgaaaaagagggagagagggacggagggacggagg
gacggagggaattttgtcacgtgtgtgttgccgtggctgcatcgtctgtc
tccattttaccatgcccatacatccctccctccctcttttcccccctccc
tccctccctcctccctccctccctcccttcctccctccgtccttcctaca
gGCGGAGGCCGCCCTCCTCGAGAGCCTTTCCTCCCTCCTCCTCTTCTCCT
CCCCTCTCCCCATCCGTCCCTCCCTCTCCTCCTCGCCACCCTTGGACGGG
TCGTCAAGCTTTACTTAGGAGGTCCTCTTGCCTCCTCAGGGCTCACACTC
CGAGAAGCCCTCCTGAGCCGCGAGCGCGCGCAGgtacctcccttcctccc
ttcctccctccctccctctagctaccttcctacctcgccttaacatcctt
ctccgcctgtccttctgtggaccctaccccctgcagattttgcccaccaa
cacacccctccctccctccctccctccctccctccctccctcccttcctc
cctccctccctcagACCCTGTACACCCTTCTTCAAAAGGGAACGGAGGCT
GCAGCAGCGCCAGAGGCAGCGGCAAAAGAGAAGGATGAATGGGCCACGAT
GCAGGCGCGTTTCATGCAAATCGTGCAGGGTAAATAATTACCCTTCCCTC
CTTCCCTCCCCCCTTCCTCCCTCCTTCCCTTGCTTCCTTCCCTGTCGATC
GCATGGGCCACGATGCAGGCATGCTTCATGCAAATGGTGCGGGGTTGATT
AAGATCCTACCCTCCTCTGCTCCCTCCTTTCCTTCCCCCATCCTTGTCGA
TCGCTCTCTTTGTATGGTGGTCGTGGTGGTGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTACAGGTGCAGGAGGAGGGA
GGGGTGAAGGAGGATGAAGAAAGCAGCCCAATGGCCCTTATCTGTGGGGG
GGCATCGGAAGGTGTGCCTGCATGTAGGTGTGTGTCTTTCCCTGCTTGTT
CCGGGACGGGACAGAGGAGGGGGAGGGAAAAGTGATGAGAGAAAACCAAA
GAATTTTGTAAGTGGACGACACCAACGAAGACAAAGAACACGCAGAAAAA
GAAGATGAAGAAAGAGAAGAAGGTGACGCAGGGCACGGGGAAAGAGAGGA
AGGAGGAAATGGAGAGGAAGAAGCGATCAAGAAACATCAGAAGGGGGCCA
GAGGAGAAAAGCGATCAAGAAACATCACAAAAAGATGGGGGAGAGAAAGT
GATCGAGAAACATCACACGAAGGTCGACAAGGCAGATAAGACGCAAGGGA
GCGTGCGGGAAGAGAAGGGAGGAGAGGAGGAGCGGCGAGATACAACCAAA
AGAGGACAAGCCAATGATGGAGAGCCACGGGAATATATAAGATGAAGACA
CTGAAAGCTCCGAGCTGTAGGCATCGAATTAATGGAAGACGATAAGAGTG
TGTGGGTATGGCATAGATTTATTATATGGCTATTAAGTGCATGAGTCGAT
TGCACGGGTTGAGAATGCAGCCTGGAAGAAAGAAATGAAAAACGAATAAA
AGGAGAAGATGAGGAGTACCTGATACGCTTGGAAGCGAGAGGCGACTTCC
TGGACTAAAAAAGGAAGGCTCAGGGGCGTGTACCAGTACCTTAATGTCGT
TCGTGCCCCACGTACCTGTGTCATCCTTTCTCTGTGTTGTGTTGCTGCTC
ATTCGACGTAATGTTTCTTCTTCTTTCCGTCTCTGGAGGAGAAAAGTAGG
GCTTTCGTTGCCTTCCTCGACGCCTCCTCCTGCCCCATCCCCCGTCTACT
TCTCTCTCCCGACTCTTCCAATCATTAAAAATGATTTGTGTGCATTTCCT
TCATTTCCTACCTTTTCCCTCTCTCTATTCTTTCAATATGTAATTTGCGT
GTGTTTCCTTTATTCCCTTGTGCTGTGGTAGTGCAGTGCAAATGCTAGAG
AGAGGGGAAACAGGCGATGCAGACCTGTGGGGCTGGTGTCTTACTCCCTC
TCATCATTTAATCCTTCCCTCCCTCCTCCTCATTTTTTCCCTTCATCATC
ATTTCTTCCCTCATCATCATTTCCTCCCTCCCTTTCGTCTCCATCATTCC
CACGCGTCCATCGGTTGGTGCTTGACCTGTAGAGCTATCCCCCCTCCCTC
CTCATCATTC back to topprotein sequence of NO24G00270.1 >NO24G00270.1-protein ID=NO24G00270.1-protein|Name=NO24G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=602bp
MGQGQGKPGEEGATDAGEGGEEQQQQQQQSADVHQADVEEDDQRNEETFA
AGEIKAPADVPLPAFFGDQAGGKKLKEEEKKKDAQASVSPQGPRKEGRRE
GRAHPPCFLLRRSDSCYCYCSCHPSFGPSFGSSFTVPSHNHRRDDGGGRR
MGQAAGGVSARRSDRKRRIEEEEKEEEEEEARTGGQQLKPTLTSLPSIMM
ILLLRRLLLLLFLLLLPPPPTPATQPQPLTVSQLEGLEGGRERGREGGDG
AGKNIMAMLMHAQQQQQQQQQQQHARGPLFLGPVLAPPARPRQRRREGGR
KGRRKGRRRLAIPSSPPSLPLGPFPFPPPPGAIFGVRQRPVPAGEVMAPK
EVLYVIQQQLRQLETVDPFTDDYYYVMAHAKEEDKRRQDWEEEQKRREAP
SSTEDEKENSRGSDEELQRRMNKGGNNPTQGVNKLVAPVWKETKDLARKA
QAQERHDAERRVMRWEEGNRVLGHTAKSHIARPRELLSLSMKEQGPEEGE
EQGEGGQEDDHRVLMAPRTPFVGSLWQARKAIDAACAALLAMEEAEESLR
NPYLAPPKRRELEKQGLHAQQQLAAALDLPSPSNDTTTTPPSLHPPSSPP
P* back to top
|