NO24G00140, NO24G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00140 vs. NCBI_GenBank
Match: EWM20303.1 (Uncharacterized protein family Cys-rich, partial [Nannochloropsis gaditana]) HSP 1 Score: 89.7 bits (221), Expect = 1.100e-14 Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 0 Query: 10 APGQG-APIGQRMEQHEDIG-VSIG--SGSNPGGDYAPLEGQWKDGLCECWNQWSPSCLLSFFVSCVALAMLSKRTGVLPYWCVLIGMIGCGLIAIILSGFAGILIYVYGFTAFLITFLILRRVRQRYSLP 137 AP G AP+ Q ME + G VS G +GS P +Y P+EGQWKD C++Q +P+CL + FV C+ALAMLSKR G PY +L G+ L A +L GIL++ Y F+ITF +L VR +++LP Sbjct: 11 APMMGTAPVPQTMEGGMEAGRVSDGTQTGSLP-SEYRPMEGQWKDHCFACFSQMNPTCLTACFVPCLALAMLSKRMGYAPYKGILYGL----LAAFVLGWLLGILVF-YSLAVFVITFQLLLLVRAKFNLP 135
BLAST of NO24G00140 vs. NCBI_GenBank
Match: XP_009843589.1 (hypothetical protein H257_16748 [Aphanomyces astaci] >ETV66948.1 hypothetical protein H257_16748 [Aphanomyces astaci]) HSP 1 Score: 66.2 bits (160), Expect = 1.300e-7 Identity = 42/133 (31.58%), Postives = 65/133 (48.87%), Query Frame = 0 Query: 44 LEGQWKDGLCECWNQWSPSCLLSFFVSCVALAMLSKRTGVLPYWCVLIGMIGCGLIAIILSGFAGILIYVYGFTAFLITFLILRRVRQRYSLPSYFGGQGDKHDCKAVFADCLASCCCTPCVISQLLRHTFNY 177 L GQWK GL C +Q P+CL + CV+LA + R GV + +L ++ C ++ +GF G+LI++Y F + + R +P + ADC A+ CC CV++QL H +Y Sbjct: 32 LTGQWKAGLFSCCDQLIPNCLCAXXXPCVSLAQIVARLGVGDF--LLTAIVAC---LLMFTGFGGLLIFLY-------VFYLRYKFRTMLQIPG------------SACADCCAALCCNCCVLAQLATHADSY 140 The following BLAST results are available for this feature:
BLAST of NO24G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00140 ID=NO24G00140|Name=NO24G00140|organism=Nannochloropsis oceanica|type=gene|length=1459bpback to top protein sequence of NO24G00140.1 >NO24G00140.1-protein ID=NO24G00140.1-protein|Name=NO24G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top Synonyms
Publications
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