NO24G00130, NO24G00130 (gene) Nannochloropsis oceanica

Overview
NameNO24G00130
Unique NameNO24G00130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2933
Alignment locationchr24:41634..44566 +

Link to JBrowse

Properties
Property NameValue
DescriptionHeme utilization protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:41634..44566 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010413HutX-like
Homology
BLAST of NO24G00130 vs. NCBI_GenBank
Match: CBN78719.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 130.6 bits (327), Expect = 5.200e-27
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 0
Query:   52 ADLAGKERLKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGESQQI 187
            +DL G+ERL++FL D + LG  RFV + DG ILEAVGSF+N+   ++P +G  AT  S+ K FE HLN D+V  + M+  ++  G  D Y+ RF+  EG TLLS+MLH    AY+  A ++WDKL+  FGE Q +
Sbjct:   72 SDLKGRERLEKFLGDCALLGPTRFVSVTDGAILEAVGSFDNLRYTDLP-KGRYAT-VSEGKGFECHLNCDKVKSIKMVTKQSPGGSFDLYITRFLDEEGNTLLSAMLHGVDGAYEPGAADYWDKLRKTFGEDQSV 204          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: KXZ54826.1 (hypothetical protein GPECTOR_4g897 [Gonium pectorale])

HSP 1 Score: 114.4 bits (285), Expect = 3.900e-22
Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 0
Query:   40 SRLAAGGGEGNAADLAGKERLKRFLEDAS--FLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184
            SR+ A         +     L+  L+DAS   LG +RF+ + DG ILE+V  + ++   E+P RG LAT AS DK+FE H+ L +V  V   +SKAK GD+D Y  RF   +GK +LS++LH    AYD  A++ W  L   +G+S
Sbjct:   17 SRVQAPRPAARLVSVQANASLRTLLDDASGAGLGKVRFIVLGDGAILESVNDWGSVRYNEVPNRGLLATIASADKSFECHITLSKVKEVRFAKSKAKAGDYDIYATRFYGEDGKVMLSTILHGSQGAYDPAAVQAWTSLASKYGDS 162          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: XP_001700101.1 (predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 104.0 bits (258), Expect = 5.200e-19
Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   60 LKRFLEDASF--LGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184
            L++ L+DAS   LG  RF+ + D  ILE+V  +  +   E P RG LAT AS+DK+FE H+ L +V  +   +SKAK GD+D Y  RF   +GK +LS +LH  A  YD  A+  W+ L   +GES
Sbjct:   34 LRQLLDDASAAGLGKTRFIVIGD-AILESVNDWGAVRYNETPSRGLLATIASEDKSFECHIPLSKVKEIKFAKSKAKAGDYDVYATRFFGEDGKVMLSCVLHGSAGQYDPKAVAAWNSLAQKYGES 158          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: PNW80930.1 (hypothetical protein CHLRE_07g335700v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 104.0 bits (258), Expect = 5.200e-19
Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   60 LKRFLEDASF--LGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184
            L++ L+DAS   LG  RF+ + D  ILE+V  +  +   E P RG LAT AS+DK+FE H+ L +V  +   +SKAK GD+D Y  RF   +GK +LS +LH  A  YD  A+  W+ L   +GES
Sbjct:   34 LRQLLDDASAAGLGKTRFIVIGD-AILESVNDWGAVRYNETPSRGLLATIASEDKSFECHIPLSKVKEIKFAKSKAKAGDYDVYATRFFGEDGKVMLSCVLHGSAGQYDPKAVAAWNSLAQKYGES 158          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: PNH07604.1 (hypothetical protein TSOC_005947, partial [Tetrabaena socialis])

HSP 1 Score: 89.0 bits (219), Expect = 1.700e-14
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   97 EIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGESQQIQ 188
            +IP RG LAT AS DK+FE H+ L +V  V   +SKAK GD+D Y  RFV  EG+ L+S +LH +  AY+  A+E W  L   +GES + +
Sbjct:    5 DIPGRGTLATIASADKSFECHITLSKVKEVRFAKSKAKAGDYDLYATRFVGDEGRVLMSVILHGQQGAYEPAAVEAWGGLAAKYGESLKFE 95          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: XP_002957670.1 (hypothetical protein VOLCADRAFT_98770 [Volvox carteri f. nagariensis] >EFJ41219.1 hypothetical protein VOLCADRAFT_98770 [Volvox carteri f. nagariensis])

HSP 1 Score: 87.8 bits (216), Expect = 3.900e-14
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   97 EIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184
            E+P RG LAT ASDDK+FE H+ L +V  V   +SKAK G++D Y  RF+  +GK L+S +LH     YD  A+  W  L   +GE+
Sbjct:   37 EVPSRGVLATIASDDKSFECHITLSKVKEVKFAKSKAKSGEYDIYATRFLGPDGKVLMSCLLHGNQGVYDPSAVAAWTSLATKYGET 123          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: XP_005782272.1 (hypothetical protein EMIHUDRAFT_233398 [Emiliania huxleyi CCMP1516] >EOD29843.1 hypothetical protein EMIHUDRAFT_233398 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 82.8 bits (203), Expect = 1.200e-12
Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 0
Query:   59 RLKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGESQQI 187
            R   F     FLG  RFV   +G ILEAVG+FE +   E P +G LAT +  D +FE H+ L  VA    + SK K      +++R +  EG  LLS++LH   + Y++ A+ ++++L+  FG +  I
Sbjct:   13 RASFFSPHLEFLGPCRFVVQGEGAILEAVGAFEELRVSETP-KGALATVSVGD-SFECHVRLKEVASASFV-SKEKPDGKALHIVRLLDKEGGPLLSAILHAGPDGYEDGAVSFFERLREKFGATVDI 137          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: WP_011612104.1 (heme utilization protein HuvX [Trichodesmium erythraeum] >ABG51741.1 heme utilization protein HuvX [Trichodesmium erythraeum IMS101])

HSP 1 Score: 80.5 bits (197), Expect = 6.200e-12
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0
Query:   60 LKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLH-REAEAYDEDALEWWDKLKGVFGE 183
            LK FLE    LG +R +  ++  +LE  G  + +   E+P +G+ A   SD   FE HLN+D++ RV     +AK+G+   Y IRF+ G+G+  LS+ L   +   Y+   +E W  LK  +GE
Sbjct:    5 LKDFLEVCEQLGTLRLIVTSNAAVLEVKGKIQKLFYAELP-KGKYANMHSD--IFEFHLNMDQIKRVKFETGEAKRGNFTTYAIRFLDGQGEVALSAFLQWGKPGEYEPGQVEAWQGLKEKYGE 125          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: WP_044304984.1 (heme utilization protein HuvX [Richelia intracellularis])

HSP 1 Score: 78.6 bits (192), Expect = 2.300e-11
Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 0
Query:   60 LKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLH-REAEAYDEDALEWWDKLKGVFGESQQIQ 188
            LK FLED   LG +R +  ++  +LE  G  E +   ++P +G+ A     +K FE HLN+DR++++     +AK G+   Y IRF+    K  LS  L   +   Y+   +E W+ LK  +GE  Q++
Sbjct:    5 LKEFLEDCQMLGTLRLIVTSNAAVLEVRGKIEKLFYADLP-KGKYANL--HNKDFEFHLNMDRISKIRFETGEAKHGNFTTYSIRFLDNMEKPALSLFLQWVKPGEYESGQVEAWNALKTSYGEVWQLE 130          
BLAST of NO24G00130 vs. NCBI_GenBank
Match: WP_099799963.1 (heme utilization protein HuvX [Synechococcus lividus] >ATS19653.1 heme utilization protein HuvX [Synechococcus lividus PCC 6715])

HSP 1 Score: 78.2 bits (191), Expect = 3.100e-11
Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   61 KRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLH-REAEAYDEDALEWWDKLKGVFG 182
            ++FL+D S LG +R V  ND  +LE     E +   E+P +G  A   SDD  FE HLN+D+VA +   + +AK+G+   Y IRF+ G  K++LS+ L       Y    +E W  L+  +G
Sbjct:   13 QQFLKDCSRLGLLRLVVTNDTAVLEVRSPLEKVFYAELP-KGRYANMHSDD--FEFHLNMDQVATIRFEEGQAKRGNFTTYAIRFLDGNDKSVLSAFLQWGNPGEYANGQVEAWYALQEQYG 131          
The following BLAST results are available for this feature:
BLAST of NO24G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN78719.15.200e-2747.41conserved unknown protein [Ectocarpus siliculosus][more]
KXZ54826.13.900e-2240.41hypothetical protein GPECTOR_4g897 [Gonium pectora... [more]
XP_001700101.15.200e-1943.65predicted protein, partial [Chlamydomonas reinhard... [more]
PNW80930.15.200e-1943.65hypothetical protein CHLRE_07g335700v5 [Chlamydomo... [more]
PNH07604.11.700e-1447.25hypothetical protein TSOC_005947, partial [Tetraba... [more]
XP_002957670.13.900e-1445.98hypothetical protein VOLCADRAFT_98770 [Volvox cart... [more]
XP_005782272.11.200e-1236.72hypothetical protein EMIHUDRAFT_233398 [Emiliania ... [more]
WP_011612104.16.200e-1235.48heme utilization protein HuvX [Trichodesmium eryth... [more]
WP_044304984.12.300e-1133.33heme utilization protein HuvX [Richelia intracellu... [more]
WP_099799963.13.100e-1136.89heme utilization protein HuvX [Synechococcus livid... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR123ngnoR123Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00130.1NO24G00130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_102139g1gene10109Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00130.1NO24G00130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00130 ID=NO24G00130|Name=NO24G00130|organism=Nannochloropsis oceanica|type=gene|length=2933bp
CTGCCTCCTGTGTGGGCGATTGTACGGGCAGTGGTGAGAGTGTGGTTGGA
GGGTGGTGATGGTGCACATGGGCTGATGTTGTCTGGTGATGGTATCCACA
CAGCATGCATGACTTGAGGGAAGGACGTTGCTTACTAGTCCTCTTAAATC
TACTTCCAGAAAAGTTACGGCGCACAGATTCCACGCTGCTGCCTAGTCCT
TGCTTGTCTGATAGACGGGAACCCACGCACAACGTCTACATTTACACTTA
CCCTGGCCGAGTCGACCGTACGATCATCGTGATGGGAGAGAGCCAAGACA
GCGAGGCACACACACACATCAACTTGGGAGGCATGTCGCATTGTTCTGCT
TCGAGATATGTCCTCGTTTCATTCCCCATCTCAACCCCTGCTTGCAGCTA
TCTTCCAGGACGACGACAAGATGCAGGGCACAACAATACGTCTTGCTTAA
ACGAGGCAATGATAAACTGCTTGCCTTATTATTCCTCCATCTGTGCCTGT
TGCTACTCGACGTAAGCTTCATGCGCCCTATGATGTGGATGTCCTCACCA
GGACCCTCCCTCATTGACCTCTTCCCTAACTCCATGCATAGGCAAACGAG
GAAAACAGGCGACCTAGAAGGCAGTCATGAAGACGCTCGCTCCCTATTTC
ATCCCCCTCCTCCTCCTTCTCCCCCTCCTCACCTCCTCCTTCATCCTCCC
CTCCTTCCGTCCGTCCTCGTCGTCCTCTTCTTCGCCCTTTGTTTCCCGTC
TGGCGGCGGGAGGTGGAGAGGGGAATGCAGCAGACCTGGCAGGGAAAGAA
AGGTTGAAGCGCTTTTTGGAGGACGCAAGCTTCCTGGGTAACATTCGgtg
agcgagaaagagtgagggagggaggcatggaaaggcacatacgttgtggt
aacagaagctttaggcttgggaaaggacgttgtctatctgcttcttagta
ataatatcataatgaatgccgttccatttcctcatcctttccttcgtttt
cctctgccgcgctgaccgttcttcctccccccctgttccttccacccctc
ctcagTTTCGTCTGCATGAATGACGGTGGTATATTGGAGGCGGTCGGGTC
CTTCGAGAACATGGCGTGCAAGGAGATCCCAGAGAGGGGTGAGCTGGCCA
CTTTTGCCTCCGACGACAAGACCTTCGAGGCTCATCTTAACCTTGATCGA
gtgagtcggtagagacagacagacctaccctccctccctccctccctccc
tccttctttcttgaagggattgggaattttctatgaacaataagtgcttt
ttctccaacgcgacccgcctgtcttcccctccctctctacattaatcgaa
ggcagccgcgaagtgtgtcccgaccacctttccctccgttcctcccttcc
tccctccctccctccctccctcacgcccgccctccctccctccctccctc
cctccctccctcactccccagGTCGCCCGCGTGGACATGATCCAGTCCAA
AGCCAAGAAAGGCGATCACGACAACTATGTCATCCGCTTCGTCTCCGGAG
AGGGGAAAgtgagggcgggagggaggcagggagggagggagggagggagg
ggggagggagggagggcagcgttactaacggcatgtcgtgaattgttgac
tgactcaccccccctccctccctccctacctcgctcgctccctctgtcag
ACCCTCCTCTCTTCCATGCTACACCGAGAGGCCGAGGCCTACGACGAGGA
CGCGTTGGAGTGGTGGGACAAGCTCAAGGGCGTCTTCGGCGAGAGCCAGC
AGATTCAATAAGATTCAATAGCCAGCCTCCCTTGCTCCGTCGCTCCGTCC
GCCCCTTCCATCCTCTGTCCATCCCTCCCTGTGTTTATTTTTCCCTTCGT
TTTTTCAATCCCTCCTTTCCTCTCTCCTTGCTCTTATGAGCCTTAAAAAA
TGTAGAGTTCTAGAAGTAGAAAGAGAGAGAGGGAGAGAGAGATTTTGGGA
GAAAGAGAGATAGAGGGAGGGTGAGATATTGAGGGAGAATGAGAGATTGA
TTGAAAGAGAGATTGAGAGAGAGAACGAGAGAGAGAGAGAGAGAAAGAGA
GGAGCAGAGGTATATATATATATATGTTGGGGTAGAGAGAGAGAGGTAGA
GAGAGAGGTAGAGGTAGAGAGAGAGAGGTAGAGGTAGAGAGAGGTAGAGA
GCGGGGGAGGGAAAGAGCGGTAGAGAGCGGTAGAGAGATTGAGAGATCAT
TGGAGGGGGTGGAACGAAGAGAAGAAACTGATGGTAACTAGACAGGATTC
CGAAAAGATGTGCACGACAATCTAGTCTAAACCTTTCTTCCTTTCCATCC
ATCGCGTCACAGCCTTTTCTCATGTCAAATGCCACTCATTTTCCTGCCAT
ACATACACCTGTACTCTTCTGTGTATATTCGGTTATAGACGCAAGCACCA
CCATTTCCTTCACTTAAAGGAAGGATGCCGTGCGTGCGGTTATGGACACA
AGCACCACCATACGGACTATACAGATAGTTGTTAAAGTTTTTTGTTGTTT
TTATTTTTGGGGGGGGGTTGTTCGCCATTTGGCGGTGGCAAAGCGCCTTC
CCCCCGACCTAAGAGGCTAACAGTCCTGAAGCTCAAGACAATTGAACATA
AGAACATGCAAGCATACGGGCATAACGCAACCGCGAAAGAAATGGCAACG
AGCAACCAGCAAACCTGTCCCTAAATCCCTCTCTCTCTTTCTTCTGTGTT
TCCAGTGCAGTCTTGCTTTGCCAACCGTTTTTTGATTTTCTTCGTCTCAA
TTTTTCTTTCTCTTAATCTTCTTTTCTTCCTTCGTGCTCATGCTCCTGCT
CGCTCCGGCTCCTGCTTCACACACACCCTCTCAGGGAGGAGGAAGGGAAG
GGAGGGAGGAGGTAGGGAGGGAGGGAGGGAAGG
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protein sequence of NO24G00130.1

>NO24G00130.1-protein ID=NO24G00130.1-protein|Name=NO24G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MKTLAPYFIPLLLLLPLLTSSFILPSFRPSSSSSSSPFVSRLAAGGGEGN
AADLAGKERLKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPE
RGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEG
KTLLSSMLHREAEAYDEDALEWWDKLKGVFGESQQIQ*
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Synonyms
Publications