NO24G00130, NO24G00130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO24G00130 vs. NCBI_GenBank
Match: CBN78719.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 130.6 bits (327), Expect = 5.200e-27 Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 0 Query: 52 ADLAGKERLKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGESQQI 187 +DL G+ERL++FL D + LG RFV + DG ILEAVGSF+N+ ++P +G AT S+ K FE HLN D+V + M+ ++ G D Y+ RF+ EG TLLS+MLH AY+ A ++WDKL+ FGE Q + Sbjct: 72 SDLKGRERLEKFLGDCALLGPTRFVSVTDGAILEAVGSFDNLRYTDLP-KGRYAT-VSEGKGFECHLNCDKVKSIKMVTKQSPGGSFDLYITRFLDEEGNTLLSAMLHGVDGAYEPGAADYWDKLRKTFGEDQSV 204
BLAST of NO24G00130 vs. NCBI_GenBank
Match: KXZ54826.1 (hypothetical protein GPECTOR_4g897 [Gonium pectorale]) HSP 1 Score: 114.4 bits (285), Expect = 3.900e-22 Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 0 Query: 40 SRLAAGGGEGNAADLAGKERLKRFLEDAS--FLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184 SR+ A + L+ L+DAS LG +RF+ + DG ILE+V + ++ E+P RG LAT AS DK+FE H+ L +V V +SKAK GD+D Y RF +GK +LS++LH AYD A++ W L +G+S Sbjct: 17 SRVQAPRPAARLVSVQANASLRTLLDDASGAGLGKVRFIVLGDGAILESVNDWGSVRYNEVPNRGLLATIASADKSFECHITLSKVKEVRFAKSKAKAGDYDIYATRFYGEDGKVMLSTILHGSQGAYDPAAVQAWTSLASKYGDS 162
BLAST of NO24G00130 vs. NCBI_GenBank
Match: XP_001700101.1 (predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 104.0 bits (258), Expect = 5.200e-19 Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 0 Query: 60 LKRFLEDASF--LGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184 L++ L+DAS LG RF+ + D ILE+V + + E P RG LAT AS+DK+FE H+ L +V + +SKAK GD+D Y RF +GK +LS +LH A YD A+ W+ L +GES Sbjct: 34 LRQLLDDASAAGLGKTRFIVIGD-AILESVNDWGAVRYNETPSRGLLATIASEDKSFECHIPLSKVKEIKFAKSKAKAGDYDVYATRFFGEDGKVMLSCVLHGSAGQYDPKAVAAWNSLAQKYGES 158
BLAST of NO24G00130 vs. NCBI_GenBank
Match: PNW80930.1 (hypothetical protein CHLRE_07g335700v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 104.0 bits (258), Expect = 5.200e-19 Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 0 Query: 60 LKRFLEDASF--LGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184 L++ L+DAS LG RF+ + D ILE+V + + E P RG LAT AS+DK+FE H+ L +V + +SKAK GD+D Y RF +GK +LS +LH A YD A+ W+ L +GES Sbjct: 34 LRQLLDDASAAGLGKTRFIVIGD-AILESVNDWGAVRYNETPSRGLLATIASEDKSFECHIPLSKVKEIKFAKSKAKAGDYDVYATRFFGEDGKVMLSCVLHGSAGQYDPKAVAAWNSLAQKYGES 158
BLAST of NO24G00130 vs. NCBI_GenBank
Match: PNH07604.1 (hypothetical protein TSOC_005947, partial [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 1.700e-14 Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 0 Query: 97 EIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGESQQIQ 188 +IP RG LAT AS DK+FE H+ L +V V +SKAK GD+D Y RFV EG+ L+S +LH + AY+ A+E W L +GES + + Sbjct: 5 DIPGRGTLATIASADKSFECHITLSKVKEVRFAKSKAKAGDYDLYATRFVGDEGRVLMSVILHGQQGAYEPAAVEAWGGLAAKYGESLKFE 95
BLAST of NO24G00130 vs. NCBI_GenBank
Match: XP_002957670.1 (hypothetical protein VOLCADRAFT_98770 [Volvox carteri f. nagariensis] >EFJ41219.1 hypothetical protein VOLCADRAFT_98770 [Volvox carteri f. nagariensis]) HSP 1 Score: 87.8 bits (216), Expect = 3.900e-14 Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 97 EIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGES 184 E+P RG LAT ASDDK+FE H+ L +V V +SKAK G++D Y RF+ +GK L+S +LH YD A+ W L +GE+ Sbjct: 37 EVPSRGVLATIASDDKSFECHITLSKVKEVKFAKSKAKSGEYDIYATRFLGPDGKVLMSCLLHGNQGVYDPSAVAAWTSLATKYGET 123
BLAST of NO24G00130 vs. NCBI_GenBank
Match: XP_005782272.1 (hypothetical protein EMIHUDRAFT_233398 [Emiliania huxleyi CCMP1516] >EOD29843.1 hypothetical protein EMIHUDRAFT_233398 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 82.8 bits (203), Expect = 1.200e-12 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 59 RLKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLHREAEAYDEDALEWWDKLKGVFGESQQI 187 R F FLG RFV +G ILEAVG+FE + E P +G LAT + D +FE H+ L VA + SK K +++R + EG LLS++LH + Y++ A+ ++++L+ FG + I Sbjct: 13 RASFFSPHLEFLGPCRFVVQGEGAILEAVGAFEELRVSETP-KGALATVSVGD-SFECHVRLKEVASASFV-SKEKPDGKALHIVRLLDKEGGPLLSAILHAGPDGYEDGAVSFFERLREKFGATVDI 137
BLAST of NO24G00130 vs. NCBI_GenBank
Match: WP_011612104.1 (heme utilization protein HuvX [Trichodesmium erythraeum] >ABG51741.1 heme utilization protein HuvX [Trichodesmium erythraeum IMS101]) HSP 1 Score: 80.5 bits (197), Expect = 6.200e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0 Query: 60 LKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLH-REAEAYDEDALEWWDKLKGVFGE 183 LK FLE LG +R + ++ +LE G + + E+P +G+ A SD FE HLN+D++ RV +AK+G+ Y IRF+ G+G+ LS+ L + Y+ +E W LK +GE Sbjct: 5 LKDFLEVCEQLGTLRLIVTSNAAVLEVKGKIQKLFYAELP-KGKYANMHSD--IFEFHLNMDQIKRVKFETGEAKRGNFTTYAIRFLDGQGEVALSAFLQWGKPGEYEPGQVEAWQGLKEKYGE 125
BLAST of NO24G00130 vs. NCBI_GenBank
Match: WP_044304984.1 (heme utilization protein HuvX [Richelia intracellularis]) HSP 1 Score: 78.6 bits (192), Expect = 2.300e-11 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 60 LKRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLH-REAEAYDEDALEWWDKLKGVFGESQQIQ 188 LK FLED LG +R + ++ +LE G E + ++P +G+ A +K FE HLN+DR++++ +AK G+ Y IRF+ K LS L + Y+ +E W+ LK +GE Q++ Sbjct: 5 LKEFLEDCQMLGTLRLIVTSNAAVLEVRGKIEKLFYADLP-KGKYANL--HNKDFEFHLNMDRISKIRFETGEAKHGNFTTYSIRFLDNMEKPALSLFLQWVKPGEYESGQVEAWNALKTSYGEVWQLE 130
BLAST of NO24G00130 vs. NCBI_GenBank
Match: WP_099799963.1 (heme utilization protein HuvX [Synechococcus lividus] >ATS19653.1 heme utilization protein HuvX [Synechococcus lividus PCC 6715]) HSP 1 Score: 78.2 bits (191), Expect = 3.100e-11 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 61 KRFLEDASFLGNIRFVCMNDGGILEAVGSFENMACKEIPERGELATFASDDKTFEAHLNLDRVARVDMIQSKAKKGDHDNYVIRFVSGEGKTLLSSMLH-REAEAYDEDALEWWDKLKGVFG 182 ++FL+D S LG +R V ND +LE E + E+P +G A SDD FE HLN+D+VA + + +AK+G+ Y IRF+ G K++LS+ L Y +E W L+ +G Sbjct: 13 QQFLKDCSRLGLLRLVVTNDTAVLEVRSPLEKVFYAELP-KGRYANMHSDD--FEFHLNMDQVATIRFEEGQAKRGNFTTYAIRFLDGNDKSVLSAFLQWGNPGEYANGQVEAWYALQEQYG 131 The following BLAST results are available for this feature:
BLAST of NO24G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO24G00130 ID=NO24G00130|Name=NO24G00130|organism=Nannochloropsis oceanica|type=gene|length=2933bpback to top protein sequence of NO24G00130.1 >NO24G00130.1-protein ID=NO24G00130.1-protein|Name=NO24G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bpback to top Synonyms
Publications
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