NO24G00100, NO24G00100 (gene) Nannochloropsis oceanica

Overview
NameNO24G00100
Unique NameNO24G00100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6577
Alignment locationchr24:32315..38891 +

Link to JBrowse

Properties
Property NameValue
DescriptionLysine-specific demethylase 2A
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:32315..38891 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
Homology
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: KXJ12962.1 (Lysine-specific demethylase 2B [Exaiptasia pallida])

HSP 1 Score: 265.0 bits (676), Expect = 7.800e-67
Identity = 142/325 (43.69%), Postives = 197/325 (60.62%), Query Frame = 0 
Query:  256 DDEM-GSALWQVQEEAAGGKGAGVAEVKRGELIETVLSRDRLGREGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPPKVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            DDE+ G   + V+E+ A  K  G   V++  L+ +  + + +   G  TP+L E+ D L G+R+P  + F+ + V   +G  R V V+DV  Q+  E  TL+ W +YF +  R             ++YNVISLEFSHT L  +V+SP+ +R +DW +T WP +L               YP V++YCLMSV GCYTDFH+D GGTSVWYH++KG+KIF+L  PT+ NL LYE+WV S  Q                +K G TFL+P+GW+HAVFTP DSLVFGGNFLHSY+I+ QI++  IE  T+VP + RYP Y  +++Y L
Sbjct:   25 DDEIEGKRTFSVEEKLASAKFEGTNFVQK--LVGSDFTLNFVQEGGFKTPILFENPDGL-GMRMP-FDGFTVTDVKNYVGARRLVDVIDVNTQQALE-LTLQNWVKYFTNPER------------ERIYNVISLEFSHTKLQEIVESPSVVRQIDWVNTIWPQNLIEEQTDSTNSLADMKYPKVRKYCLMSVGGCYTDFHIDFGGTSVWYHIIKGEKIFWLIPPTEENLQLYEKWVLSGKQQDMFFGDQVKQCSRVFLKSGDTFLIPTGWIHAVFTPVDSLVFGGNFLHSYSIKEQIRISEIEDNTKVPQKFRYPFYGEIMWYVL 332
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_020902878.1 (lysine-specific demethylase 2A-like [Exaiptasia pallida])

HSP 1 Score: 265.0 bits (676), Expect = 7.800e-67
Identity = 142/325 (43.69%), Postives = 197/325 (60.62%), Query Frame = 0 
Query:  256 DDEM-GSALWQVQEEAAGGKGAGVAEVKRGELIETVLSRDRLGREGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPPKVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            DDE+ G   + V+E+ A  K  G   V++  L+ +  + + +   G  TP+L E+ D L G+R+P  + F+ + V   +G  R V V+DV  Q+  E  TL+ W +YF +  R             ++YNVISLEFSHT L  +V+SP+ +R +DW +T WP +L               YP V++YCLMSV GCYTDFH+D GGTSVWYH++KG+KIF+L  PT+ NL LYE+WV S  Q                +K G TFL+P+GW+HAVFTP DSLVFGGNFLHSY+I+ QI++  IE  T+VP + RYP Y  +++Y L
Sbjct:   25 DDEIEGKRTFSVEEKLASAKFEGTNFVQK--LVGSDFTLNFVQEGGFKTPILFENPDGL-GMRMP-FDGFTVTDVKNYVGARRLVDVIDVNTQQALE-LTLQNWVKYFTNPER------------ERIYNVISLEFSHTKLQEIVESPSVVRQIDWVNTIWPQNLIEEQTDSTNSLADMKYPKVRKYCLMSVGGCYTDFHIDFGGTSVWYHIIKGEKIFWLIPPTEENLQLYEKWVLSGKQQDMFFGDQVKQCSRVFLKSGDTFLIPTGWIHAVFTPVDSLVFGGNFLHSYSIKEQIRISEIEDNTKVPQKFRYPFYGEIMWYVL 332
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: CDQ92160.1 (unnamed protein product [Oncorhynchus mykiss])

HSP 1 Score: 260.0 bits (663), Expect = 2.500e-65
Identity = 134/286 (46.85%), Postives = 175/286 (61.19%), Query Frame = 0 
Query:  298 REGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPP----KVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            REGL  P++ E KD L GL +PD + FS S V   +G  R V VMDV  Q+  E  ++ +W  Y+              +TPP    K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GC+TDFHVD GGTSVWYH+L+G K+F+L  PT  NL LYE WV S  Q                +K+G TF++PSGW+HAV+TP+D+LVFGGNFLHS+NI  Q+ +++IE +TRVP + RYP Y  + +Y L
Sbjct:   67 REGLRDPIVFEKKDGL-GLEMPDSD-FSVSDVKLFVGSRRMVDVMDVTTQKGIE-MSMAQWRRYY--------------ETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVL 335
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_014055044.1 (PREDICTED: lysine-specific demethylase 2A-like [Salmo salar] >XP_014055045.1 PREDICTED: lysine-specific demethylase 2A-like [Salmo salar])

HSP 1 Score: 260.0 bits (663), Expect = 2.500e-65
Identity = 134/286 (46.85%), Postives = 175/286 (61.19%), Query Frame = 0 
Query:  298 REGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPP----KVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            REGL  P++ E KD L GL +PD + FS S V   +G  R V VMDV  Q+  E  ++ +W  Y+              +TPP    K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GC+TDFHVD GGTSVWYH+L+G K+F+L  PT  NL LYE WV S  Q                +K+G TF++PSGW+HAV+TP+D+LVFGGNFLHS+NI  Q+ +++IE +TRVP + RYP Y  + +Y L
Sbjct:   67 REGLRDPIVFEKKDGL-GLEMPDSD-FSVSDVKLFVGSRRMVDVMDVTTQKGIE-MSMAQWRRYY--------------ETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVL 335
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_021416905.1 (lysine-specific demethylase 2A-like [Oncorhynchus mykiss] >XP_021416907.1 lysine-specific demethylase 2A-like [Oncorhynchus mykiss] >XP_021416908.1 lysine-specific demethylase 2A-like [Oncorhynchus mykiss])

HSP 1 Score: 260.0 bits (663), Expect = 2.500e-65
Identity = 134/286 (46.85%), Postives = 175/286 (61.19%), Query Frame = 0 
Query:  298 REGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPP----KVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            REGL  P++ E KD L GL +PD + FS S V   +G  R V VMDV  Q+  E  ++ +W  Y+              +TPP    K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GC+TDFHVD GGTSVWYH+L+G K+F+L  PT  NL LYE WV S  Q                +K+G TF++PSGW+HAV+TP+D+LVFGGNFLHS+NI  Q+ +++IE +TRVP + RYP Y  + +Y L
Sbjct:   67 REGLRDPIVFEKKDGL-GLEMPDSD-FSVSDVKLFVGSRRMVDVMDVTTQKGIE-MSMAQWRRYY--------------ETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVL 335
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_023845776.1 (lysine-specific demethylase 2A [Salvelinus alpinus])

HSP 1 Score: 260.0 bits (663), Expect = 2.500e-65
Identity = 134/286 (46.85%), Postives = 175/286 (61.19%), Query Frame = 0 
Query:  298 REGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPP----KVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            REGL  P++ E KD L GL +PD + FS S V   +G  R V VMDV  Q+  E  ++ +W  Y+              +TPP    K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GC+TDFHVD GGTSVWYH+L+G K+F+L  PT  NL LYE WV S  Q                +K+G TF++PSGW+HAV+TP+D+LVFGGNFLHS+NI  Q+ +++IE +TRVP + RYP Y  + +Y L
Sbjct:   67 REGLRDPIVFEKKDGL-GLEMPDSD-FSVSDVKLFVGSRRMVDVMDVTTQKGIE-MSMAQWRRYY--------------ETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVL 335
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_024238717.1 (lysine-specific demethylase 2A-like [Oncorhynchus tshawytscha] >XP_024238718.1 lysine-specific demethylase 2A-like [Oncorhynchus tshawytscha] >XP_024238719.1 lysine-specific demethylase 2A-like [Oncorhynchus tshawytscha])

HSP 1 Score: 260.0 bits (663), Expect = 2.500e-65
Identity = 134/286 (46.85%), Postives = 175/286 (61.19%), Query Frame = 0 
Query:  298 REGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPP----KVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            REGL  P++ E KD L GL +PD + FS S V   +G  R V VMDV  Q+  E  ++ +W  Y+              +TPP    K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GC+TDFHVD GGTSVWYH+L+G K+F+L  PT  NL LYE WV S  Q                +K+G TF++PSGW+HAV+TP+D+LVFGGNFLHS+NI  Q+ +++IE +TRVP + RYP Y  + +Y L
Sbjct:   67 REGLRDPIVFEKKDGL-GLEMPDSD-FSVSDVKLFVGSRRMVDVMDVTTQKGIE-MSMAQWRRYY--------------ETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVL 335
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_020380802.1 (lysine-specific demethylase 2A [Rhincodon typus])

HSP 1 Score: 259.6 bits (662), Expect = 3.300e-65
Identity = 132/282 (46.81%), Postives = 178/282 (63.12%), Query Frame = 0 
Query:  298 REGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPPKVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            R+GL  P++ + KD L G+++P+ + FS + V   +G  R V VMDV  Q+  E  T+ +W +Y+     TPAA         K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GCYTDFH+D GGTSVWYH+ +G KIF+L  PT  NL +YE WV S  Q                +K+G TFL+PSGW+HAV+TP+D+LVFGGNFLHS+NI TQ+++H+IE +TRVP + RYP Y  + +Y +
Sbjct:   22 RDGLRCPLIFKKKDGL-GIKMPEPD-FSVNDVKMFVGSRRMVDVMDVNTQKGIE-MTMAQWVKYY----ETPAA------EREKLYNVISLEFSHTKLENIVQRPATVDLVDWVDNIWPRHLKERQTESTNAIVEMKYPKVRKYCLMSVRGCYTDFHIDFGGTSVWYHIHRGGKIFWLIPPTPLNLEIYESWVLSGKQGDIFLGDKVEKCQRIELKQGYTFLIPSGWIHAVYTPEDTLVFGGNFLHSFNIPTQLRIHNIEDRTRVPSKFRYPFYYEMCWYVV 290
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_011478383.1 (lysine-specific demethylase 2A [Oryzias latipes])

HSP 1 Score: 259.2 bits (661), Expect = 4.300e-65
Identity = 140/332 (42.17%), Postives = 199/332 (59.94%), Query Frame = 0 
Query:  254 VPDDEM-GSALWQVQEEAAGGK-GAGVAEVKRGELIETVLSRDRLGREGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPP----KVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            + DDE+ G   + ++E+   GK G+ + +  +G+      + + + REGL  P++ E+ D L GL++PD + FS S V   +G  R V VMDV  Q+  E  ++ +W  Y+              +TPP    K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GC+TDFH+D GGTSVWYH+L+G K+F+L  PT  NL +YE WV S  Q                +K+G TF++PSGW+HAV+TP+D+LVFGGNFLHS+NI  Q+ +++IE +TRVP + RYP Y  + +Y L
Sbjct:   25 ISDDEIEGKRTFDLEEKLQCGKFGSELIKYMKGK----DFTFEYIQREGLRDPIVFETSDGL-GLQMPDSD-FSVSDVKLFVGSRRIVDVMDVNTQKGIE-MSMAQWRRYY--------------ETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLEMYENWVLSGKQGDIFLGDKCCDCQRIELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVL 335
[Close]
BLAST of NO24G00100 vs. NCBI_GenBank
Match: XP_024139478.1 (lysine-specific demethylase 2A [Oryzias melastigma])

HSP 1 Score: 258.8 bits (660), Expect = 5.600e-65
Identity = 142/335 (42.39%), Postives = 197/335 (58.81%), Query Frame = 0 
Query:  254 VPDDEM-GSALWQVQEEAAGGKGAGVAEVKRGELIETVLSRD----RLGREGLATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEEEGWTLRKWAEYFHSDRRTPAAGVRTADTPP----KVYNVISLEFSHTPLANMVDSPAFIRSLDWADTCWPPSL----------TLHGDYPHVKRYCLMSVKGCYTDFHVDMGGTSVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQ----------------VKEGQTFLLPSGWLHAVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLFYAL 554
            + DDE+ G   + ++E+   GK          ELI+ +  +D     + REGL  P++ E+ D L GL++PD + FS S V   +G  R V VMDV  Q+  E  ++ +W  Y+              +TPP    K+YNVISLEFSHT L N+V  PA +  +DW D  WP  L           +   YP V++YCLMSV+GC+TDFH+D GGTSVWYH+L+G K+F+L  PT  NL +YE WV S  Q                +K+G TF++PSGW+HAV+TP+D+LVFGGNFLHS+NI  Q+ +++IE +TRVP + RYP Y  + +Y L
Sbjct:   25 ISDDEIEGKRTFDLEEKLECGKFG-------SELIKYMEGKDFTFEYIQREGLRDPIVFETSDGL-GLQMPDSD-FSVSDVKLFVGSRRIVDVMDVNTQKGIE-MSMAQWRRYY--------------ETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTAQNLEMYENWVLSGKQGDIFLGDKCYDCQRIELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVL 335
The following BLAST results are available for this feature:
BLAST of NO24G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KXJ12962.17.800e-6743.69Lysine-specific demethylase 2B [Exaiptasia pallida... [more]
XP_020902878.17.800e-6743.69lysine-specific demethylase 2A-like [Exaiptasia pa... [more]
CDQ92160.12.500e-6546.85unnamed protein product [Oncorhynchus mykiss][more]
XP_014055044.12.500e-6546.85PREDICTED: lysine-specific demethylase 2A-like [Sa... [more]
XP_021416905.12.500e-6546.85lysine-specific demethylase 2A-like [Oncorhynchus ... [more]
XP_023845776.12.500e-6546.85lysine-specific demethylase 2A [Salvelinus alpinus... [more]
XP_024238717.12.500e-6546.85lysine-specific demethylase 2A-like [Oncorhynchus ... [more]
XP_020380802.13.300e-6546.81lysine-specific demethylase 2A [Rhincodon typus][more]
XP_011478383.14.300e-6542.17lysine-specific demethylase 2A [Oryzias latipes][more]
XP_024139478.15.600e-6542.39lysine-specific demethylase 2A [Oryzias melastigma... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00100.1NO24G00100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00100.1NO24G00100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00100 ID=NO24G00100|Name=NO24G00100|organism=Nannochloropsis oceanica|type=gene|length=6577bp
CTCCATGCTTGCTCGCTGGCTGTTTGAGGGTTGGGGGATGGATAATTACC
TGTTAATGACTTGTTCATGCAAGGTGTGAGATGCCGAGGTCGTTCGAGGT
GCTTGTGTGTGTATGTATGTGCGTCTGCGCCAATAGCCACCATCTCTCGG
ATGCTAAGGTGGAGGGCGCAAAGAAAATGATAAGCGCATTTGTGAAAAAG
TATCGCAGAGGTCGCAATTTTGTCAACCACTGCTGTTGTGTGCGACGGAA
GGAAGCCGGGAGCCTGTGTGGGTGTATTTGGTTGTTGATACGGTACACGG
TGCTGGGTGCCGGGGCAAGAGGGAGAGAGAGAGAAGGGGCTCTCGCAGGG
GTGATATGGTGATATTGTCGGGCAAATGGAGGCTGAGGACGTTTCCTCAC
AGAATCACGCTAACTCTGTCCTGTCTGCTGCCTTTACACACAGCCACGGA
CAGGCAAAAGTGTCCAAGTGGTCAGGAGCGTACTTCATGTGCGCTGCGCG
TTTCAGTGATAGCTGGGTTGGCGATTTTATCATCAACACGGGGAGCACAG
CAAGGGAAGCCAAAAAAAAACTGGGATACACGACATTCCAACACACTTAC
TCCTCCCACCCCATCAAATCCATACACAGCGCGAGCAGCACGATCTGGGC
GACCTTTCCTGCAAGGCAGCAGATACAAATATACCAAATTTCCCCGCGAG
CAAAAAGAGgtaagcagatcgtcaaagcggcacatccggcttaccgtaat
atgtccagccctctccctccctcccttcccccctccctccctcccctcca
ccagAATGGACCCTCACGACGAAACACAAGAAGTCGAAAGCGCAACGCAC
CTAGAGGAGGAAGTCAAGGAGGAGAAAGAGGAGGGAAAAGGGGGAGAGCC
TGAAGATGAAGCAGAGGACGATGATGACGAGGCCTCCTCCTTTCACGACG
GAAGTACCATCGACACCATGGAGCAAGAAGAGGAGCAGCAACAGCGCCAG
CAACAGCTCTTGCAACGCCTCGCATCCTCTCCAAACTATCCACCCTCCTT
CATGCCCCCTGCGCTTCCCCCTCCTCCCCCTCCACCCCAACCTCCCTCCT
CCTCCTCCTCCTCCTCCGACCCCTCCCAGCCCCTGCCGACCAAGGCCACC
CTCCGCCTGAAACTTAAGCCTCTCCCCCCCCCAATTCCCCCACCGTCGTC
CCTCCCTTCCTCCCTCCCATCCTCCCACGGGGGCACTTCCGGCCAAGCCG
CCTTCCGTCTCAGGTTGAAACCCCTCCCTCCTCCCCTCCCTGCCCGCCCT
TTCCCCCTCCCTCCATCCTCTTCCTCCTCCACCTCGACGTCAAATCAACC
GTCATTTAAACTCAAACTAAAAGTCAAGCCACCCCCGCCCCCACCCAAgt
aaggagggagggagggagggaggaggagggagggagggaggggagggaga
tatagtcaagctcacatttatctcttgttctctccctcccacgtcttttt
tacattccgcacagAGAGACGCCAGTGAAACGACAACGGGGCTTTGACGA
TATTTGGGACTCGCCCTCCTCCTCTTCCTCCGCCTCCTCGGAAAATGAAG
GAGACGACGCAGAGAAGGAAGCAGGGAGGGAGGCGGGAGGGAGGGAGGAG
GAACGGGGGCCTCGGATCCCTCCCCTTCTCGTACCCGACGACGAGATGGG
AAGCGCTCTGTGGCAAGTGCAGGAGGAGGCTGCCGGAGGGAAGGGAGCCG
GCGTTGCGGAGgtagggagaaagggagggagggagggatggagggaggga
gggattggtggtggtttgaggtcaccctgacctttcctccctccctccct
ccctcccttccttcccagGTGAAACGAGGAGAGTTGATCGAAACGGTTCT
TTCGAGGGACCGGTTGGGGAGGGAGGGGCTAGCGACGCCCGTCTTGATAG
AGAGCAAAGATTCCCTGCCCGGCCTAAGAGgtgggaagggagggagggag
ggagggaggagggagggagggagggaggaaggaaggcgcggtctacagtc
ccggcgacgcgctgtattactccctgactagagggtgtgtgcactctctc
tctttcattctctctctctctctgtctgtgtctctctctctgtctctctc
tgtctgtgtctctctctctgtctctctctttcattctctctctctctctc
tgtgtctctctctctgcccctctctctctctctgtctctctctctctctg
tctctctctctctctcattctctctctctctctctctgtctctctctctt
tcattctctctctctctctctgtctctctctctccctctcctcgcgctgc
agggaaacggctggaaagaagccccctgaacatgcttctcacacccctcc
ctccctccctccctccctccctccctccctccctccctccctccctcgtt
ctagTCCCGGACAAGGAAACGTTCTCTCCGTCCCTGGTCGCTGAGCTTTT
GGGGCCCGAGCGCAGCGTGCATGTGATGGATGTGGAAGGGCAGGAGGAGG
AGGAGGGATGGACGCTCCGAAAATGGgtgaggaaggggggagggagggag
ggagggagagggagggactggtttcggggctgtgtccgtgggagcaaaag
tactccgcctgcaaggagggagagagggagggagggagggagggaaggta
gagggcatgccatctcaccaccttccccccccatctccctccctgcagGC
GGAGTACTTCCACTCGGACCGACGGACGCCCGCGGCCGGTGTAAGGACAG
CTGACACCCCTCCCAAGGTCTATAACGTCATCTCCCTCGAATTCTCCCAC
ACGCCCCTCGCCAACATGGTCGACAGTCCCGgtcagcacccctccctcct
tccccccctccctcccccctccccctcaccctccctccctcccttcctcc
ctccagCCTTCATCCGCTCCCTCGACTGGGCTGACACCTGTTGGCCTCCC
TCTCTGACCCTCCACGGAGACTACCCACATGTCAAGCGCTACTGCCTCAT
GTCGGTCAAGgtacgccctccctccctccctccctccctcccttccttcc
ttcctctcttccttccgttcttcgtccgctgtgccattcgatccacttac
actcttccctccctccctccctccttccctccttccctccagGGCTGCTA
CACTGACTTCCACGTCGACATGGGCGGGACGAGCGTCTGgtgaggatgga
gggagggagggggagggagggagaacggaggcagagcgacatgggaagga
gaaaggcagcgaaggagggagggagggaggaagggagggagggcatatct
tcctcgctgatgttttgtacgttcacctcctccatttcttgcagGTATCA
CGTGCTGAAGGGAAAGAAGATCTTTTTTCTCTTCGCGCCCACGGATACGA
ACCTCGgtgcgtccctccctccctccctccctccctctttatatctcctc
tttttctcactcctcctccttgctccctttcgtacattcatgccatttct
ttctcaaccctccctccctccctccctccctccctccctcccttccttcc
tagCTCTGTACGAGCGCTGGGTCACGAGCAAAAATCAGgtatggcctagg
gagggagggagggagggagggagggagggagggagggagggaggccttat
aaatcagaggcaacaggaagagggaaagaggagggaggggggaaggagga
gggagggagggagggctgccggctgatcttgtgctttgatttctcctcct
gcaggcaaccacatttttcgggggcgtggctgagggggattcactgttga
gGTGAAGGAAGgtgagggagggagggagggagggagggagggagggaggg
agggagagtcttcataacgagctgctcggggtgcctcacgctcctctctg
accgacgccacgcgtttgacacttccctccctcccctcctccctcccgcc
cgccctccctccctccctccctccctcccacagGTCAAACCTTCCTCCTC
CCCTCCGGCTGGCTTCACGCTGTCTTCACGCCGCAGGACTCCCTCGTTTT
TGGTGGGAATTTTCTTCATTCGTACAATATCGAGACGCAAATCAAGgtgc
gtcccctccctccccccctccctcccccctccctccctcccacactccct
ctctccctccctccctccctccgctcgacccatcgggcgcgtctctccag
tttcacccgtggagggacgaggaaaaggagggagggagggaggagggaga
gagggaggggggagggatagaaaggcatcagctatttccttctgttttac
gtctcaacgcctccaaaagaacacgttcgaatccaacaagggagggggga
gggagggaggagggggagggagggaggagggaatgaggggggaaggcaca
cttacttatatttttgtcttcatcttccagGTGCATCACATAGAGGTCAA
GACCCGTGTGCCGGTGGAGGCGCGCTATCCTGCCTACGTTCGTCTCCTCT
TCTACGCCCTGGGCTGCTTCTATAGGACAGTGgtgcggagggagggaggg
agggaggagggagggaaggagacaaatggatgtcgacgttttctctcacg
ctctctcacgaatggacagGGAGAGGAAGGGGAAGGAGGTGGTGACGGTG
AAGGAGGAGGAGGAGGAGGAGGAGGGTACGAGACATTGACGCCGAGGGAG
AAAGCGGGCCTCTTCGCCCTTCACGCGTACTGTGAGgtgaggagagaggg
aggagggagggaggaggagggagggagggagggagggagggagggaggga
gggagagaggaggaacagctcggtgttcggacccgcctgcctttaagggc
acagtgacgaacgagaaagcaacctcaatctgaatttcttcgaaaggagg
catgaggaaggagggagggagggaagggagggagggaagggaggaaaggg
agggagggagagagagagggcgaagaaaaatctcatggattctcctgttt
gtgcctgtttttttcgacatggttcccgaacatcacacttacgacaacaa
cagAGACTTTACCCCAACCAAGCCGCAGTGGGCCGGGAGGTGGCGGCGCA
TCACTCCCTCGACAGCTGCTCCTCCCTCCTGGAGGCAGTAGCCCGGGTGC
TACGGgtagggagggagggggagggagggagggagggaagaagggagggg
agatgaaagtagaacccgtctctgattgcctgtcctccctccctccctct
ttccctccctccctccctccctccctccctgttgtagGCCCAGCCCCGCT
TAGAGGAGCGGGCTCGACGGGCACCACGGCCGAAGAAGATGGATTTAGAG
TACGACGAGGAGGGGAGGAGGAGAGGAGGAAGAAGCAGCAGCAGCAGCTT
CTGCGGAAGATGCGGGGAAGGCGGGGGGAGGAAGGGAGCTGAAGGGGCAG
GAAGAGGAGGAGGAGGAGGAGTGGTATCTTCATCCGAAGCTGAATGGAAG
CAGACGGACGGGCAACCgtaagttacgcggaatggcccacacgggaggcc
tccctccctccctccctcccctccctccaaccctcgcagctctgaagact
ctcgcccgtctttttactcatccctttctccctccctccctcccttttcc
ccctcctccccagATCTGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGATTCACTATACGTCCAAGGGCCGTCG
GCGGAAGCGCACCGCCCACCTGTCAGGCTACGAGgtaggtgccctccctc
cctccctcccgcccctcaccccttcttaatgccgtctctctccttcacaa
tacttccctccctccctccctccctccctccctccccgacccacacgttt
tcctccctccctccctccctccctccctccctccctcccttccctccctc
cttccttccttcctcagGTCTACGACGCCGAGGCCGTCTCCTCCTCGGAG
GATGACGAGGGAAATGCCCTGGACGAGCTGTATGACAGCCAGGAGGAGGA
GGAGGAGGAGGAGgtaaggagggagagatggagaggagggtggaggaaga
gctcaagactgcaaggaaagacgaagagaaggagggagggagggagggaa
agagggaggaagggagggaggagagggagggcggccgaagcaaaaggatt
tggatatccattttgcatctggattcggatctaattattttttgattgat
tttatttgtttgtctttcccccgtcattagcagctatcccctccttctgt
taaccttaacacacccctccctccctccctccctccctccctccctccct
ccctatcctccctccctccctatcctcctaatgtcctctaagGTGGAAGA
CGCACGATTCCGGAAGCTCAAGGCAACCAAGCAGGATCCCGGGGACGGGA
AGGACGAGGACATGGAGGGGCCAGGAGGAGGGAGGGGAAGAGAGGGGCAT
CAACGAGGAAGCCGGGGAGGAAGGTGA
back to top

protein sequence of NO24G00100.1

>NO24G00100.1-protein ID=NO24G00100.1-protein|Name=NO24G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=827bp
MDPHDETQEVESATHLEEEVKEEKEEGKGGEPEDEAEDDDDEASSFHDGS
TIDTMEQEEEQQQRQQQLLQRLASSPNYPPSFMPPALPPPPPPPQPPSSS
SSSSDPSQPLPTKATLRLKLKPLPPPIPPPSSLPSSLPSSHGGTSGQAAF
RLRLKPLPPPLPARPFPLPPSSSSSTSTSNQPSFKLKLKVKPPPPPPKET
PVKRQRGFDDIWDSPSSSSSASSENEGDDAEKEAGREAGGREEERGPRIP
PLLVPDDEMGSALWQVQEEAAGGKGAGVAEVKRGELIETVLSRDRLGREG
LATPVLIESKDSLPGLRVPDKETFSPSLVAELLGPERSVHVMDVEGQEEE
EGWTLRKWAEYFHSDRRTPAAGVRTADTPPKVYNVISLEFSHTPLANMVD
SPAFIRSLDWADTCWPPSLTLHGDYPHVKRYCLMSVKGCYTDFHVDMGGT
SVWYHVLKGKKIFFLFAPTDTNLALYERWVTSKNQVKEGQTFLLPSGWLH
AVFTPQDSLVFGGNFLHSYNIETQIKVHHIEVKTRVPVEARYPAYVRLLF
YALGCFYRTVGEEGEGGGDGEGGGGGGGGYETLTPREKAGLFALHAYCER
LYPNQAAVGREVAAHHSLDSCSSLLEAVARVLRAQPRLEERARRAPRPKK
MDLEYDEEGRRRGGRSSSSSFCGRCGEGGGRKGAEGAGRGGGGGVVSSSE
AEWKQTDGQPSEEEEEEEEEEEEEEEEEEEIHYTSKGRRRKRTAHLSGYE
VYDAEAVSSSEDDEGNALDELYDSQEEEEEEEVEDARFRKLKATKQDPGD
GKDEDMEGPGGGRGREGHQRGSRGGR*
back to top
Synonyms
Publications