NO24G00080, NO24G00080 (gene) Nannochloropsis oceanica

Overview
NameNO24G00080
Unique NameNO24G00080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6686
Alignment locationchr24:24493..31178 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:24493..31178 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR013ncniR013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR114ngnoR114Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO24G00080.2NO24G00080.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO24G00080.1NO24G00080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|61186gene_12212Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO24G00080.2NO24G00080.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO24G00080.1NO24G00080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO24G00080 ID=NO24G00080|Name=NO24G00080|organism=Nannochloropsis oceanica|type=gene|length=6686bp
ATGgtgagggagggagagggggatgggaggaaagtatgaaaacattcgag
cgccctttccgtctcatgagactttcaactcaatcaatctccctccctcc
ctccctcccttcttccttatgcctgtccgcttcacagGCATCAGCTCCCC
TTCCCTCCCTACCCGCTGCGAGAAATAAAGTGCTCAACGACAGCAAGGAG
GAAGAGGGGGAGGTTGAAGAAGGGGCGGAAGGCGCGGGGGAAGGCGGGTT
AGGACAATCGTCCTTGCCGAGTGATAGGCTCAGTGTCGTTGCTACAGGTG
CAGCTGCTGCTTCTCTTGAAGAGAGTGGGAGGGAAGAAGGGCAGCAGGAG
GAGAAGGAGGAGGAGGAGGATGGAGGGAGGGAAGGAGGGAGGGAAGCCGG
AAGGAGGAAAACGTCGCTGGAGCGGATGGTGGAGGATCCTGTCCTACAAG
CTTTGTTACGAGGTGAGGGAAGGAGGGAGGAGGGAGGGAGGGAGGGAGAG
AGGGAGGAAAGGATTGTACTTACACACGCATGCGACACTTATTCTCACAG
AGAAAGCGACGACGAGGAGCAGGAGCAGGAGCAGGAGGAGGAGGAAGAGG
AGGAGGAAGAGGAGGGAGTGGAGAGAGAGGGAAAGGTGGCAGCGGTTGAA
GGAGTGATGGTGGTGCAAGAGGAGGAGGAGGGGGCAGAAATGAAGGAGGC
GGCGGCGGAGCATGAGGAGGTGGAGGAGGTGGAGGAGGAGGAAGAGAAGA
GGATGGACGGGGAAATGGGCAGGGGCAGGAGGAGGGCTCAGACTCTCCCT
CCTCCCTCTCCTCACCTTCCCCGGTGCCCGCCAATGCGGAGGTGCCCGCT
GAGGAGgtagggggagcatcatcaccatcacaaccaccaccaccaccagc
agcagctgcagcagctgtagccaaagccttcttcttggccgcggaggcag
cagctgtccctcttcctccctcgcccttccatccattcatccctcctcct
ccctccctccttcttcccaccttcctttccgccttccgccttctccggct
gcggcgtcacctgatttggccccgcgagaaaccgcgggaaagaggatgga
gagaggaagaggaagggaaggacggagaggctgtagccgtggaggtggtg
gaaaagcaacgaaggagagatggaagaagaggacgggaaggaggagggag
ggacaggtagtccgagtgcacctccctcccctctacctcttcatcctctg
tcttctccacaagAGGAGGGGGGAGGGAGGGAGGGAGGGGAGGAAGAGCC
CTCCTCTTTCTTTCCCTTTACGGGTACGGAGGACGAGGTAGAAGAAGCAG
TGGGGGGGATGAAGGAGGGCGGGAAGGAGGGGAGGATGAAGAGGAGCAGT
TGGAGAAGGCAGGGGAGTGGGGGAAAAGAGGGCCTGCAGCTGCTGCTGCT
GCTGCTGCTGCCACCCTCGATCTTCGTATCCTGACACTCCCTCTCCATAG
CCTCTTCCACCAGCAGCAAGgtaaagcttcttccctccctccctccctcc
tttcctctgtccctccctcctcccttccttccttcctcttatctcttatc
ggacacacaaagaatttccgaccacttccctccctccctccctccctcct
cagGGCACGGGCGGGCGGCGCTCTCGGCGGCAACGACGGTCGATCTCGGG
AATTTTCCTGAGGAGGAAAAGCAGCCAGACGGCCTTGCTGGAGGAGGAGG
AGGAGGAGGTGGAGGAGGAGGAGGAGGTGGGGAGGAGGAGGAGGAGGAGG
GAGGAGGAGAAGAAGAGAAGGAAAGGGAAACAATGGgtgaggaggaaggg
agagggagggagggaagaagggcttgctagtgagtagcaggagcagtgct
ggatgataatattgccaagcccgctttccctctgtgtcttctgccctgtc
ctaagctccctctccctctctccctctctccttccctcctccagATAATG
ACGAGGAAGACGACGAGATGGACCTTACATGCCCTCTGCTCGACGACAAG
GAGGGAGGGACGGAGGGAGGGGTAGACGTCTCCATCCTCACCACCGCCAG
CACGCGTCGAGAGGGAGAGGAAGgtggtttgctccctccctccctccttc
ctccctcccttccttcttccctctttgttcgccattccccaccccttgac
atgcattctgtgaatcgctcacttacccacctgcttgctcacacgccctg
tcctccctccttccctcctcctctctccctccctccagCGGGCGAGAGCA
GTTTTATGCTCCTCGAAGAAGACGAGGCGGAAGCGCGGATGATGGAGAAT
TGGGGAGGGAAAAGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGG
GGAGGTGGTGGAGAGGGAGGAGGGAGGGAGGGAGGGAGGGCATGGTTCgt
cggcggtgacgacgccgccagaggtggaggaggaaaaggggaggaaggga
ggggggagggaggggacgaagggagaagatcgatgagtcgccgggggagg
agagaggaagaggaggaggaggaggaggaagaggaggagaagaagaggaa
gaggaggaggacgtcggtggcggcagctgctgcctctgaggctctgccca
ctgccacagAGGAAGAGGAGGAGGGAGGAGAAGAGAAAGGAAAGGAGGGA
GGGACGGAGGAGCTGTCGGAGGAGGCACTGCCGGGGATGGCGGGGGGGGC
TTCCCGGAGAAGgtgaggcggggaggcaggcagggagggagggagggagg
gagggaagggagttgtggggaggggatcgaaatcaacatgaacaaatcgc
ccactccctccctcgctcctcccgccctccctccctccctccctcccgcc
ctccctccccctcctcccttcccacagCTCTCTGCCCCCGTCCTTGCCTG
TGTTCTCCCTTATGCCGAAACCGTCCTCCTTCCATCCCTTCTGTCTCCCC
CTCCTTCCTCCTCCTCGGCCGTGGCTCACACGCCTACCGCGGCTGTCTTG
TCCTATGCCATGTCCCTCGCACTGCACCTGATGCGGgtaaggagggagag
aaggagggaggtagggaggggggagggaatgaaggaagcaggctcttttg
gaagcgcttcccttgtccctgagcgattgaacgagggagggagggaaagg
gcgaaaaatgaaagagtgcggcccactctctaccaccgcgacaagcgccc
atcactcatcctcctcttgcttcttccctccctccgacctctcacctctc
cctctgtttttccttctctttcccagCCCGCCCGGGAGGGGGATACCGTC
GAGGCCCCTCTTCCCCCTCCCTCCCGCTTCCTCCTCCTACTTCAGCGCGT
GGCCGCCGCAGCCGCCATTGGGGCGCAGgtatgccctccctccctccctc
ccctccctccctccctccctccctccctccctccccctcctccctccctc
cctccctccctccctgcctgctctccctgccctccctccctcccttctcc
ctcctctccaaccccgtccagatgacacccgagtgtcttcacttcctccc
tcctccccccccttcctccctccctcctcccgcctcgcagGCCTCCTCTA
CCGCAGTGGAAGCCGAGATTGCCTCCCATGCCTACACCTCTCCGGAGACA
CGGAAACGTGCCGCCAGCGGGGTGAAGGAGGGAGGGAAGGAGGGGGGCAA
GAGGGGGGTAGGAGGGACGACAGCCGGAGGAGCCAAGAGAGAGGGAGGGA
GGGAGAGAGGGAGGGGTGAGGGGGTGAAGTTCAATGACTTTGACTTCTCC
TGTGTAGCCACGCCCATCGATACCCGgtaaagaagggagggagggaggga
gggagggagggagggagggaggaaagacaggcctaacaatacgacttacg
ttatcacttcacctcacttcgtcatctctccctccctccctccctccctc
cctccctccctccagCCCTGGTTCCGAAGTTCCCCTTCAGAACGTCGCCC
GGGCCTTGGCCCATGTCCTCGATGCCGAGGGAGCGGTGGAGGCCGAGGGC
GGGAGGGAGGAAAGGCAGgtcctggccgccttcctctccgccctttccca
cctctcatcctccccttcctccctcccttcctcctccctcctccccttct
gtccggcagATCGCTGCTTTCTACTTCTCGCAATGGGCGTCGCTCTTCCC
CTCCTCTGAAAAAAAGAACACCCTCCCTCCTTCCCCCTCCCTCCCTCCCT
CGCTCCCTCCCCCTCTGCGGGCCCGGCTGCTCCATCATCTTTCCTCCCTG
GCGCGgtgaggtggagggagggacggaggacgggatcgaggaagggggaa
aagagaagattcctccttcgagtgctcacatactcacccttccctcttgc
cctccctgcctttctccctccctccctctctcccttcccaagATTCGAGC
TCCGCCGGCTGTTCAACGCCCCTCCCCTACCGCTGACCACCCAAGAGCGA
CCGCATACAAAGCATCCGCACGCCACCACCACGGCCGGGGAGGGGAAGGA
TAACAGAAGCAAGgtaagagaggagggagggagggagggagggagggagg
gagggagggagggagggagggagggagggagggagggagggaggagggag
ggagggtgaacttggcacatgggttatgatttcagctcactctttgattg
ttccctggcccatttcctctccctcttcctcggcctctcatctccacccc
tcgcccacatgcacgcctccccttcctgtctgcacacggcctgggaggga
tcagacgacggcctctcatcctattgacaccattctcccctccctccttc
cctccctccctcagGTCCACGCCCTCCTCTCCGTGCGCATGGACGGGGCC
TCCGAGGCTTTGAGCGACGGGTGTTTGTCGTCCCTCGTCTCCAAGgtaat
gaaggaaggagggagggaggcagtgcgcgcccttcgggcgatagctcact
ttttctctctcggacgaaagagctcaaggaagatcaaagacgataagtaa
gatgtttgttcacattgctcctttcctcctcctccctccctccctccctc
ccttcctccctagGCCGCCCTCCACATCCACGCGGCGACTGCGTCCCTTC
CTCCCTGCTTCCTTACCATCCCCCTCTTCCGCCTCCTCGCCCTCCACCGT
GAGAGCCATCATTCTCATCTGCCCCTCGCACCCCACCTTCTTAATGGCTC
AAAAGATGgtaagcccgccctccctccctccctccctccctccctctttc
ccttcctcgctactttcacagctatgtctgacttcaatgaacccctccct
cctccctccctccctccctccctccctccctccctccctccctccagCCA
AGCTGAAGATTGCTTTGGAGGCCGAGGCCGTCGGACGCGAGGTAGAGGTC
GTCAAGgtacgtcccttcccccctccctctcccgccctccctcccgccct
ccctccctcagtctcactccccccctccctccctccctctctagATGCTC
CTGGGCGCCTGTCACGCACGTCGTTTCCTCCACCAGCTCCTGTCCTGGGA
GGGGGTGACAGAGGCCGTGGAGGCCATAGGCGGCTACACTCTTTTACAGG
AGGCCGCCGCCCTCTTACACAGgtgagcttcctccatccctttctccctc
cttctcctgacaatactcaagcacttgccctccctccccccaagGCATGC
CGCTGGCAGTGGCGACGAGGAAGACGCCCACCTTGCCATTTTCCGAGACG
TGTCTGgtgcgtccctcctccctccctccctccctccctccctccctccc
tccccctcccttcaatccatcccctcccttcctccctgcatttcctccca
ccctcttttccctgatcccctactcactctccctctctcccccctccttc
cctccctcctttcagCCCTTCAGTCCTCCCTCGCTGCCGAGCACTCTCTG
ACTGAGGAGCGGATCCAGCAAGCCGAGGCTTTGCTTAATGAGTGGGAGCA
TCTCTATCgtaagcctttccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctcccttc
ctcgacccctttttttcaattagtctaacttacatccttcattcctccct
ccctccctccctctttatcttcttcctactcacagGCGATCGTAAAGCGG
CTGCCATTGTCACCACCTGTAAGGGGCGCAGCAGTAGCAGCAGCAGCAGC
AGCAGCAGGGGAGGGCGAGGAGGAGGAGGGAGGAGGGACGGAGGGACGGA
GGGAGGGACGGAGGAAGGCTGGGTGCCACGGCCGGGGCTCTGTAAAGAAG
TCTTGAAAATGATGGAGGATGCAAGGGAGGAAGGTGAGCAGGGGAGGTAG
GGAGGGAAGGAGGGAGTGTTTCGACTGATATTTTTTTCCCTTGTTTCCCA
TACAGTTTTGTATCCACGCGTCTTCCCGCCCGAGGACGAGGACGAGGACG
AGGAGGGGCAGGTGGTAGAGGAGAGAGGAGTAGCCTAATTGATAGAGAAA
AAGGAGTTTACGATCGAGCACCAGGAGGTAGGGAGG
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protein sequence of NO24G00080.2

>NO24G00080.2-protein ID=NO24G00080.2-protein|Name=NO24G00080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1068bp
MASAPLPSLPAARNKVLNDSKEEEGEVEEGAEGAGEGGLGQSSLPSDRLS
VVATGAAAASLEESGREEGQQEEKEEEEDGGREGGREAGRRKTSLERMVE
DPVLQALLRGEGRREEGGREGEREERIVLTHACDTYSHRESDDEEQEQEQ
EEEEEEEEEEGVEREGKVAAVEGVMVVQEEEEGAEMKEAAAEHEEVEEVE
EEEEKRMDGEMGRGRRRAQTLPPPSPHLPRCPPMRRCPLRRGGGREGGRG
GRALLFLSLYGYGGRGRRSSGGDEGGREGGEDEEEQLEKAGEWGKRGPAA
AAAAAAATLDLRILTLPLHSLFHQQQGHGRAALSAATTVDLGNFPEEEKQ
PDGLAGGGGGGGGGGGGGGEEEEEEGGGEEEKERETMDNDEEDDEMDLTC
PLLDDKEGGTEGGVDVSILTTASTRREGEEAGESSFMLLEEDEAEARMME
NWGGKRRKGGREGGREEGEVVEREEGGREGGHGSGRGGGRRRERKGGRDG
GAVGGGTAGDGGGGFPEKLSAPVLACVLPYAETVLLPSLLSPPPSSSSAV
AHTPTAAVLSYAMSLALHLMRPAREGDTVEAPLPPPSRFLLLLQRVAAAA
AIGAQASSTAVEAEIASHAYTSPETRKRAASGVKEGGKEGGKRGVGGTTA
GGAKREGGRERGRGEGVKFNDFDFSCVATPIDTRPGSEVPLQNVARALAH
VLDAEGAVEAEGGREERQIAAFYFSQWASLFPSSEKKNTLPPSPSLPPSL
PPPLRARLLHHLSSLARFELRRLFNAPPLPLTTQERPHTKHPHATTTAGE
GKDNRSKVHALLSVRMDGASEALSDGCLSSLVSKAALHIHAATASLPPCF
LTIPLFRLLALHRESHHSHLPLAPHLLNGSKDAKLKIALEAEAVGREVEV
VKMLLGACHARRFLHQLLSWEGVTEAVEAIGGYTLLQEAAALLHRHAAGS
GDEEDAHLAIFRDVSALQSSLAAEHSLTEERIQQAEALLNEWEHLYRDRK
AAAIVTTCKGRSSSSSSSSSRGGRGGGGRRDGGTEGGTEEGWVPRPGLCK
EVLKMMEDAREEGEQGR*
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protein sequence of NO24G00080.1

>NO24G00080.1-protein ID=NO24G00080.1-protein|Name=NO24G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1090bp
MASAPLPSLPAARNKVLNDSKEEEGEVEEGAEGAGEGGLGQSSLPSDRLS
VVATGAAAASLEESGREEGQQEEKEEEEDGGREGGREAGRRKTSLERMVE
DPVLQALLRGEGRREEGGREGEREERIVLTHACDTYSHRESDDEEQEQEQ
EEEEEEEEEEGVEREGKVAAVEGVMVVQEEEEGAEMKEAAAEHEEVEEVE
EEEEKRMDGEMGRGRRRAQTLPPPSPHLPRCPPMRRCPLRRGGGREGGRG
GRALLFLSLYGYGGRGRRSSGGDEGGREGGEDEEEQLEKAGEWGKRGPAA
AAAAAAATLDLRILTLPLHSLFHQQQGHGRAALSAATTVDLGNFPEEEKQ
PDGLAGGGGGGGGGGGGGGEEEEEEGGGEEEKERETMDNDEEDDEMDLTC
PLLDDKEGGTEGGVDVSILTTASTRREGEEAGESSFMLLEEDEAEARMME
NWGGKRRKGGREGGREEGEVVEREEGGREGGHGSGRGGGRRRERKGGRDG
GAVGGGTAGDGGGGFPEKLSAPVLACVLPYAETVLLPSLLSPPPSSSSAV
AHTPTAAVLSYAMSLALHLMRPAREGDTVEAPLPPPSRFLLLLQRVAAAA
AIGAQASSTAVEAEIASHAYTSPETRKRAASGVKEGGKEGGKRGVGGTTA
GGAKREGGRERGRGEGVKFNDFDFSCVATPIDTRPGSEVPLQNVARALAH
VLDAEGAVEAEGGREERQIAAFYFSQWASLFPSSEKKNTLPPSPSLPPSL
PPPLRARLLHHLSSLARFELRRLFNAPPLPLTTQERPHTKHPHATTTAGE
GKDNRSKVHALLSVRMDGASEALSDGCLSSLVSKAALHIHAATASLPPCF
LTIPLFRLLALHRESHHSHLPLAPHLLNGSKDAKLKIALEAEAVGREVEV
VKMLLGACHARRFLHQLLSWEGVTEAVEAIGGYTLLQEAAALLHRHAAGS
GDEEDAHLAIFRDVSALQSSLAAEHSLTEERIQQAEALLNEWEHLYRDRK
AAAIVTTCKGRSSSSSSSSSRGGRGGGGRRDGGTEGGTEEGWVPRPGLCK
EVLKMMEDAREEVLYPRVFPPEDEDEDEEGQVVEERGVA*
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Synonyms
Publications