NO23G01750, NO23G01750 (gene) Nannochloropsis oceanica

Overview
NameNO23G01750
Unique NameNO23G01750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3790
Alignment locationchr23:637497..641286 -

Link to JBrowse

Properties
Property NameValue
DescriptionExonuclease 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:637497..641286 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00353125'-3' exodeoxyribonuclease activity
GO:0003824catalytic activity
GO:0003677DNA binding
GO:0004518nuclease activity
GO:0004518nuclease activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN_domain-like
IPR0362795-3_exonuclease_C_sf
IPR032641Exo1
IPR006085XPG_DNA_repair_N
IPR008918HhH2
IPR006086XPG-I_dom
IPR006084XPG/Rad2
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO23G01750 vs. NCBI_GenBank
Match: EWM27777.1 (exonuclease 1 [Nannochloropsis gaditana])

HSP 1 Score: 575.5 bits (1482), Expect = 3.800e-160
Identity = 275/337 (81.60%), Postives = 305/337 (90.50%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTV-IPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLELDLGFLGPRHAHGLARDIAEGRVNPDTLARY 417
            MGIAGLLPLLKSVTHTVHLREY+G  AGIDAFCWLHRGAFTCCTELV GKTTDKYIRFCMERVR+LQE+G+TP +VFDGAS+P+KRDLHL+RR AR EARAKALA+HEEGQ GQART FQKAV+ITHEMAYEL+K L+ A VRY+VAPYEADAQLAYL+RKGVVD+VI+EDSDT+PYGC RVLFKLDKEG+A EIE  NLALN+++DFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKK+L AL T GGK + +P DY+E FARARLTFRHHYVYD ++  +VPLTPF PAHLELDL FLGPRHA  LAR +AEGR+NPDTL  Y
Sbjct:    1 MGIAGLLPLLKSVTHTVHLREYQGMMAGIDAFCWLHRGAFTCCTELVLGKTTDKYIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPEDGGIVPLTPFTPAHLELDLRFLGPRHAPELARAVAEGRLNPDTLQAY 337          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: CBJ26133.1 (exonuclease, putative; 92014-93872 [Ectocarpus siliculosus])

HSP 1 Score: 338.2 bits (866), Expect = 1.000e-88
Identity = 165/288 (57.29%), Postives = 206/288 (71.53%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLP-NLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYD 368
            MGI GLLP LKSVT+  H+ EYRG  AG+DA+CWLHRGAF+C  EL  G  TDKY+ FCM+RV LL  HG+ P++VFDGASLP KR ++L RR+ R  AR+K  A         A   F KAV +TH+MA+ LMKALR AGV  VVAPYEADAQLA+LSR G VD+V++EDSD +PYGC++VLFK+D EG   EI+  NLA N       W  +MFLD+CLL GCDY+P ++ GLGI TA+KLV +HR+  KI+ A+ +   + VIP  Y E + RARLTFRHH +Y+
Sbjct:    1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAXXXXXXXXAAAQHFSKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINS--SRFVIPEGYWEQYKRARLTFRHHIIYN 286          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: GAX95999.1 (exonuclease 1, putative, partial [Pythium insidiosum])

HSP 1 Score: 336.3 bits (861), Expect = 3.900e-88
Identity = 166/339 (48.97%), Postives = 233/339 (68.73%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLE---LDLGFLGPRHAHGLARDIAEGRVNPDTLARY 417
            MGI+GLLP+LKS+T T  L  YRG T  ID +CWLHR  + C  EL  G+ TDKY+ + MERV+ L ++G+TP +VFDG  LP K+     RR AR + R   L  + +    +AR  F +A  ++  MA+ +++ L+A GV+YVVAPYEADAQLA+L R G+VD VITEDSD +P+GC +VLFK+D++G A E+++ NL  N E  F  ++++MFL+MC+ +GCDYL +LPG G+K A+ LV+QH +Y+KI++ALR + GK  +P  Y   F RA+LTFRH  VYD   +C+VPLTP A A  +    ++ FLGP  A  +A+ IAEG ++P +L R+
Sbjct:    1 MGISGLLPVLKSITETKDLHSYRGQTLAIDGYCWLHRAIYCCSQELCXGQDTDKYVVYFMERVQALLQNGITPYVVFDGGPLPMKKATEDDRRAARAKNRELGLQYYRQRNYSEARKCFSRAADVSPFMAHRVIQRLKAMGVKYVVAPYEADAQLAFLVRAGLVDGVITEDSDCLPFGCGKVLFKMDRDGVAQEVQTANLKHNKELRFHMFSDDMFLEMCIFSGCDYLASLPGFGLKKAYALVKQHGSYRKIVRALR-LEGKVRVPETYEAEFERAKLTFRHQRVYDPTRRCMVPLTPIAAAVTQKFGSEMEFLGPHLADDVAQAIAEGDMDPISLTRF 338          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: XP_018271303.1 (hypothetical protein RHOBADRAFT_53255 [Rhodotorula graminis WP1] >KPV75254.1 hypothetical protein RHOBADRAFT_53255 [Rhodotorula graminis WP1])

HSP 1 Score: 320.1 bits (819), Expect = 2.900e-83
Identity = 160/332 (48.19%), Postives = 218/332 (65.66%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLELDLGFLGPRHAHGLARDIAEGRVNPDT 413
            MGI GLLPLLK + HT H+RE+ G T  +DA+ WLHRGA+ C  +L  GK T KY  + M RVR+L+  GVTP+LVFDG  LPSK     AR   R +A A+  A   EG+  QAR  F KAV +T  MA++L+KALR   V+Y+VAPYEAD QLAYL R G+VD V+TEDSD + +GCR VLFKLD EG    I   + A   + +F GW+E  F  M +L+GCDYL ++ GLG+KTA++L+R+++T +K++Q +R + G+  +P  Y++ F RA  TF H +V+D  ++ +V LTP        DL F+GP      AR +A+G ++P T
Sbjct:    1 MGIGGLLPLLKEIQHTAHVREWAGKTVAVDAYVWLHRGAYGCAEDLALGKPTTKYANYAMHRVRMLKHFGVTPILVFDGGLLPSKMGTEDAREAKRADALARGRAFLAEGKGAQARECFVKAVDVTPAMAFQLIKALRREKVQYIVAPYEADPQLAYLERTGLVDAVVTEDSDLLVFGCRNVLFKLDGEGNCVSISRDDFARCRDFNFAGWSEVEFRQMAILSGCDYLDSVVGLGLKTAYRLLRKYKTPEKVIQFVR-LEGQLTVPRTYLDEFRRAEKTFLHQHVFDPVKRELVHLTPLPDGITAADLPFIGPVLDGDYARGVADGDIDPIT 331          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: PTQ30435.1 (hypothetical protein MARPO_0124s0012 [Marchantia polymorpha])

HSP 1 Score: 314.7 bits (805), Expect = 1.200e-81
Identity = 159/339 (46.90%), Postives = 218/339 (64.31%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLELDLGFLGPRHAHGLARDIAEGRVNPDTLARYEEE 420
            MGI+GLLP LKS+   +H+REY G    ID + WLH+ AF+C  +L +G+ TDK +++CM RV LL+ HGV P+LVFDG  LP K D    R ++R E   +A      G    A   +QKAV IT  +A  L+K L+  GV Y+VAPYEADAQ+AYL+   +V +VITEDSD I YGC RVLFK+DK G   E +  +L  N + +F  +T+ M L+MC+++GCDYLP+LPG+G+K AH L+R+ ++Y+K+++ LR  G    IP DY E F RA LTFRH  VYD   + +V LT  +      DL +LGP     L + IA G+V+P T   ++E+
Sbjct:    1 MGISGLLPTLKSIITPIHVREYAGLKVAIDTYSWLHKAAFSCSKDLCEGRPTDKIVQYCMHRVNLLRHHGVQPVLVFDGGVLPMKMDQEQIRARSRKENLQRAQEHERSGNHTAAFQCYQKAVDITPVIALSLIKVLQQEGVEYIVAPYEADAQMAYLALNDLVQVVITEDSDLIAYGCPRVLFKMDKSGHGEEFQYSDLVRNKDLNFTNFTKQMVLEMCIMSGCDYLPSLPGMGVKRAHGLMRRFKSYEKVIRHLRFSG--ITIPSDYEELFGRAILTFRHQRVYDPISEEMVHLTNVSSVDEFSDLDYLGPYLPQTLMKAIAVGKVDPCTKLPFQED 337          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: XP_002900825.1 (exonuclease 1, putative [Phytophthora infestans T30-4] >EEY59632.1 exonuclease 1, putative [Phytophthora infestans T30-4])

HSP 1 Score: 312.0 bits (798), Expect = 7.800e-81
Identity = 155/338 (45.86%), Postives = 226/338 (66.86%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLELD--LGFLGPRHAHGLARDIAEGRVNPDTLARY 417
            MGI+GLLP+LKS+T T ++  YRG T  ID +CWLHR  ++C  E+  G+ TDKY+ + M+R+  L  +GVTP +VFDG  LP K+     RR++R + R   +  +   + G+AR  F +A  ++  MA+ +++ L+A  V YVVAPYEADAQLAYL + G+ D VITEDSD +P+GC+ VLFK+D++  A EI++ NL  N    F  +TE MFL+MC+ +GCDYLP++PG G+K A+  ++QH ++ KI++ALR + GK  IP  Y E+F +A LTFRH  VY   +K +VPLTP     L+ D  + F+GP  +  +A+ IAEG ++P T+  +
Sbjct:    1 MGISGLLPVLKSITETKNIEAYRGQTLAIDGYCWLHRAIYSCSQEICLGQATDKYVTYFMDRITALLHNGVTPYVVFDGGPLPMKKGTEEERRKSRQKNRELGVQHYNNKRFGEARKCFVRAADVSPYMAHRVIQHLKAQNVAYVVAPYEADAQLAYLVKNGLADGVITEDSDCLPFGCQTVLFKMDRDNIAQEIQTANLKKNKGMSFHMFTEQMFLEMCIFSGCDYLPSIPGFGLKKAYTAMKQHGSFAKIVRALR-LEGKVRIPATYEEDFRKAVLTFRHQRVYCPTKKELVPLTPVPANLLKTDPAMDFVGPMLSSDVAKAIAEGDMDPITMTPF 337          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: XP_024512101.1 (exonuclease, putative [Cryptococcus neoformans var. neoformans JEC21] >AAW41447.2 exonuclease, putative [Cryptococcus neoformans var. neoformans JEC21])

HSP 1 Score: 311.2 bits (796), Expect = 1.300e-80
Identity = 154/337 (45.70%), Postives = 223/337 (66.17%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLELDLG-----FLGPRHAHGLARDIAEGRVNPDT 413
            MGI+GLLPLLK V+   H+ E++G    +D + WLH+GAF C  +LV+GK + K++ + M RVR L+ HG+ P LVFDG  LP+K+   ++R + R+E   KA +L  +G+  +A+  + + V +T EMAY+L+KALRA  V YVVAPYEADAQL +L R+G VD +ITEDSD + +GC++V+FKLDK+G+   I    LA+  E    GWT+  F  M +L+GCDYL ++PG+GIKTAH+L+R+  + +K+LQ +R + G  ++PP Y+ +FA+A L F +  VYD     +V L P  PA     LG     ++G     GLAR +A G V+P+T
Sbjct:    1 MGISGLLPLLKEVSVHGHISEFKGKKLAVDGYVWLHKGAFGCAEDLVKGKKSTKFVEYAMYRVRFLRHHGIEPFLVFDGGPLPAKKGTEVSRAKTRLENLEKARSLEAQGRMKEAKEAYTRCVDVTPEMAYQLIKALRAENVDYVVAPYEADAQLCFLEREGYVDGIITEDSDLLVFGCKKVIFKLDKDGQCVWIHRDRLAMVREFPMHGWTDVHFRRMAMLSGCDYLDSIPGIGIKTAHRLMRRFNSVEKLLQHIR-LEGTYLVPPTYLSDFAQAELAFLYQRVYDPSLGRLVHLNPLPPASTGFQLGDEGEKWVGVDVEEGLARRMARGDVHPET 336          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: OCF31495.1 (hypothetical protein I316_06898 [Kwoniella heveanensis BCC8398])

HSP 1 Score: 311.2 bits (796), Expect = 1.300e-80
Identity = 152/333 (45.65%), Postives = 223/333 (66.97%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLEL-DLGFLGPRHAHGLARDIAEGRVNPDT 413
            MGI+GLLPLLK +    H+ E++G    +DA+ WLH+GAF C  +LV+GK T K++ + M RVRLL+ HG+TP +VFDG  LP+K+   ++R ++R +   +A ++  +G+  +AR F+ + + IT EMAY+L+KALRA  V YVVAPYEADAQL +L R+G VD +ITEDSD + +GCR+V+FKLD  G+   I   NLA   +    GW    F  M +L+GCDYL ++PG+G+KTAH+L+R+  T +K+LQ +R M G  ++PPDY+E+FA+A L F H  VY   +  +VPL  F    L + D  ++G      +A+ +A G ++P+T
Sbjct:    1 MGISGLLPLLKEIQVNGHISEFKGKRLAVDAYVWLHKGAFGCAEDLVKGKKTTKFVDYAMHRVRLLRYHGITPFVVFDGGPLPAKKGTEVSRAKSRADNLERARSMESQGRWREARDFYTRCLDITPEMAYQLIKALRAENVEYVVAPYEADAQLCFLEREGYVDGIITEDSDLLVFGCRQVIFKLDGNGQCVWIHRDNLATIRDFPMHGWDAQQFRRMAMLSGCDYLESIPGIGLKTAHRLLRRFNTVEKLLQHVR-MEGTLLVPPDYLEDFAQAELAFIHQRVYHPHQCRLVPLNDFPEGGLAVNDEKWIGLDVEEAVAKGMALGDLHPET 332          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: XP_007881244.1 (hypothetical protein PFL1_05517 [Anthracocystis flocculosa PF-1] >EPQ26882.1 hypothetical protein PFL1_05517 [Anthracocystis flocculosa PF-1])

HSP 1 Score: 310.1 bits (793), Expect = 3.000e-80
Identity = 157/332 (47.29%), Postives = 215/332 (64.76%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLELDLGFLGPRHAHGLARDIAEGRVNPDT 413
            MGI+GLLPLLK +    H+ +YRG T GIDA+ WLHRGA+ C  +++ G  TD+YI + + R+R+LQ HGV P LVFDG  LP+K+     R Q R +   KA +L   G+  +AR  + K V IT  MAY+L+K LR  G+ YVVAPYEADAQLAYL R G++D +ITEDSD + +GC +VLFKL++ G+  EI     AL  +    GWT   F  M +L+GCDYLP++ G+G+K AH+L+R+++T +K+LQA+R + GK  +P  Y   F +A LTF H  V+D  +  +  LTP     L+  + F+G      LAR IAEG V+P T
Sbjct:    1 MGISGLLPLLKDIQSHRHVADYRGQTLGIDAYVWLHRGAYGCARDILNGLPTDRYIAYAVGRIRMLQHHGVKPYLVFDGDKLPAKQGTEDDRDQRRRDNLEKARSLERAGKAHEARDLYAKCVDITPAMAYQLIKLLRREGIPYVVAPYEADAQLAYLERHGIIDGIITEDSDLLVFGCEKVLFKLEQAGQCIEILRSRFALTRQVILSGWTPVEFRQMAILSGCDYLPSIVGMGLKNAHRLLRRYKTVEKVLQAVR-LEGKMRVPATYAREFRKAELTFVHQRVWDPRQARMTTLTPLPDGTLDEMVPFIGAPIDDELARQIAEGDVDPVT 331          
BLAST of NO23G01750 vs. NCBI_GenBank
Match: XP_017992731.1 (exo1-exonuclease which interacts with msh2p [Malassezia pachydermatis] >KOS15099.1 exo1-exonuclease which interacts with msh2p [Malassezia pachydermatis])

HSP 1 Score: 310.1 bits (793), Expect = 3.000e-80
Identity = 154/333 (46.25%), Postives = 211/333 (63.36%), Query Frame = 0
Query:   81 MGIAGLLPLLKSVTHTVHLREYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHGVTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQKAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITEDSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYIENFARARLTFRHHYVYD-LDEKCVVPLTPFAPAHLELDLGFLGPRHAHGLARDIAEGRVNPDT 413
            MGIAGLLPLLK +    H+  YRG T GIDA+ WLHRGA+ C TEL  GK T +YI + M R+++LQ +GV P +VFDG  LPSK      R   R + RA+ + LH + Q   AR  F ++V +T +MAYEL+K L+A G+ Y+VAPYEADAQLAYL ++G++D +ITEDSD + +GC+ VLFKLD  G   EI     A   + +  GWT+  F  M +L+GCDYLP++ G+G+K AH+L+R++ +  ++L+ALR + GK  +PP Y E+F RA  TF H  V+D   E  +  LTP      +  + ++G       AR IA G   P T
Sbjct:    1 MGIAGLLPLLKDIQRDSHVEAYRGKTLGIDAYVWLHRGAYACATELALGKPTTRYITYAMHRIKMLQHYGVRPYVVFDGGHLPSKAGTEAERAARRKDHRARGMELHAKHQNAAAREAFVRSVDVTPQMAYELIKQLKAHGISYIVAPYEADAQLAYLEQEGLIDGIITEDSDLLVFGCKTVLFKLDTYGHCVEIHRDRFAAAKQINLAGWTDKAFRQMAILSGCDYLPSIVGMGLKNAHRLLRKYDSIHQVLRALR-LEGKMTVPPSYAEDFERAEFTFAHQRVWDPRGEGSMTTLTPLPSEAAKEHIAYIGAPLTWDQARAIAHGEWCPIT 332          
The following BLAST results are available for this feature:
BLAST of NO23G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27777.13.800e-16081.60exonuclease 1 [Nannochloropsis gaditana][more]
CBJ26133.11.000e-8857.29exonuclease, putative; 92014-93872 [Ectocarpus sil... [more]
GAX95999.13.900e-8848.97exonuclease 1, putative, partial [Pythium insidios... [more]
XP_018271303.12.900e-8348.19hypothetical protein RHOBADRAFT_53255 [Rhodotorula... [more]
PTQ30435.11.200e-8146.90hypothetical protein MARPO_0124s0012 [Marchantia p... [more]
XP_002900825.17.800e-8145.86exonuclease 1, putative [Phytophthora infestans T3... [more]
XP_024512101.11.300e-8045.70exonuclease, putative [Cryptococcus neoformans var... [more]
OCF31495.11.300e-8045.65hypothetical protein I316_06898 [Kwoniella heveane... [more]
XP_007881244.13.000e-8047.29hypothetical protein PFL1_05517 [Anthracocystis fl... [more]
XP_017992731.13.000e-8046.25exo1-exonuclease which interacts with msh2p [Malas... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL038nonsL038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL035nonsL035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR062ncniR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR126ngnoR126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR125ngnoR125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR124ngnoR124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010476NSK010476Nannochloropsis salina (N. salina CCMP1776)gene
NSK007495NSK007495Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01750.1NO23G01750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633737gene_10016Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100074g12gene2726Nannochloropsis gaditana (N. gaditana B-31)gene
Naga_100187g4gene2787Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01750.1NO23G01750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01750 ID=NO23G01750|Name=NO23G01750|organism=Nannochloropsis oceanica|type=gene|length=3790bp
TCCTCACCCAAAGCCCGAAACGCAGGCACGAAAAATGCAACCATGCCGTT
CCTCGCACTGCCTGTACGCTCATTCCTCAATCCGTTTGTATCTTGTCAGG
CGGTACTTGCACGAGTGTCGGAGCTTCACGGACCCGCTCATTTGCCTTTC
CTAAATTTCTTTGCTCCTTTTTCCCCCCGTCACTCCCTCCCTCACTCGCC
TCCCCTCCCGCCATCCTTCCTTTACCACCCTATCCCACCCCAATACACAG
CCCGGGCGCGGAGGCGAGGCAAGCACGCAAATATGGGCATCGCCGGATTG
CTCCCGCTGCTTAAATCAGTGACGCACACGGTGCATTTGCGGGAGTACCG
GGGAACGACGGCGGGTATCGATGCTTTTTGCTGGTTGCATCGCGGCGCCT
TTACGTGCTGCACTGAGCTGGTGCAGGGCAAGACCACGGACAAGTACATC
CGCTTTTGCATGGAACGAGTGCGCTTACTGCAAGAACATGGAGTGACACC
GTTGTTGGTTTTTGACGGGGCCAGCCTCCCCTCCAAGCGCGACTTGCATC
TAGCGCGACGCCAAGCCCGGGTCGAGGCGCGGGCCAAGGCGCTGGCCCTG
CACGAGGAGGGACAACAGGGGCAGGCACGCACTTTTTTCCAGAAGGCCGT
TGTCATTACCCATGAGATGGCCTACGAATTGATGAAGGCGTTGCGGGCGG
CGGGTGTGCGGTATGTGGTGGCGCCCTACGAAGCTGATGCCCAGCTGGCC
TACCTCTCACGGAAAGGCGTGGTCGACATCGTGATAACCGAGGACTCAGA
TACCATCCCCTACGGCTGCCGACGGGTCCTCTTCAAGCTAGACAAGGAAG
GCAAGGCCCACGAGATCGAAAGCCACAACTTGGCCCTGAACGACGAGCAT
GACTTCGAGGGGTGGACTGAGAACATGTTTCTCGACATGTGCCTGCTTGC
CGGCTGTGACTACTTGCCCAACCTCCCCGGGCTTGGCATCAAGACGGCGC
ACAAGCTCGTCCGGCAACATCGTACGTACAAGAAGATCCTGCAGGCTCTC
AGGACCATGGGCGGGAAAACCGTGATCCCTCCCGACTATATCGAGAATTT
CGCCCGTGCACGGCTGACCTTTCGGCACCATTACGTGTACGACCTTGACG
AAAAGTGCGTCGTGCCCCTTACTCCCTTTGCTCCTGCCCATTTGGAACTA
GACTTGGGGTTTTTGGGACCACGGCATGCTCATGGGTTGGCGCGTGATAT
TGCCGAGGGGAGGGTGAACCCTGATACGTTGGCGAGGTACGAGGAGGAGG
GGGAGGAGGAGGGGGAGGAAGGGGGGAAAGGTAGTGGGGGCATGGAGGTT
GGAGGAGTAGAAATAGGAGATGCAGCGGGAGCAGGAGTGGCTGGAGCAGC
AGCAGCGGCAGTGGAGGAGATGAGCGCGGAAAGTCATCTGGAAATACAGC
CACGGTGGGGCGAGCAGACAGGGAGAGAGGGTGAGAGGGAAGAATTGAAA
GAGGTACTGCTGTTGGCGATGGGAATGGAAGAGGAGGAAGCGTTGGCGTC
GGTGTCGAGCCAGTGTTTGGGGGGAAGGACTTTGTATGCTGCGAGGCAAG
GATACGAGGAGGCAGCAAGAGCAGCCCATCGTGAAAGCACCCTTCGGGCG
GAGCGAGCGGTGGCGCTGATAGAGAGGAGGGTGAGGGAGGGAGGGTGTGA
GGGAGGAGAGGGAGGAGAGGGAGGGTTTCTGGTGGAGAGAGGGATGGGGG
TTAGGGGAACAGCGAGGCAGGCCTTGGTTCGTCCTTCAGGGAGCGAAGAA
GCTGCTGAATCTATTGCTACCTGCAGGAACATTCGGTCGGCGGACTCTCT
GATGACGCAGCTGGCGATGCCGATAGTAGGACGAGGACGAAGGAGGGAAA
GATGGAGGAAGGGAGGAAGGGCACCAGCTGTGTCGGTCAAGCGCCGGGAG
CTCTGGCGTTTTCAAGACTCACCGAGAAAGGAGGACGTGGAGGAGGACGA
GGACCAGGAGCGACAGCAGCAGGAACACCACCACCACCAGCAGCATGTAC
AGCGGCAGGGAAAGGAAGAAAGAAGCTTGAAAGGAACACACCGTAACGAG
CACTACCACAGGTTTGCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACTTTCAGCATCAGCGAC
AGCCTTTGGGTCCTCCAACTGTCGGATTACCCCCATCTTGCTCTTCTTCC
GCTACCTCGCACCTCTCCCCACACCCCCCCCTTTCTGTTGCTTCTGACCA
CCATCATTCATGCGATAAAGGAAGGGAGGGGGATGCAGGAGGAGGAGTGT
TAGGGGGAGGGAGGGAGGGGGGAAACGCAGCTGCTTCCATTCATGACGCC
AAAGCGGCCCTCGGCCGGTGGGAGGAAGCGGAACGCCTTCGCCGCAATGC
AGCCGCAGACGGCGCCAAAGGCGGCAAACGATCGAGCGGTGGTAATGCTG
TGGGTGCTACTGCCGCCGCCGCCGCCGCTGCTGCTGTTGCGTTACGGCCA
CCGATGACAAGCATGGATTACCAGTCGCCGATGGTCAGTGATCATCTGGA
GACCTTACAGCGGCGGCGTAAGAGGAAAAAGAAGACGGGAGGCATGCTGG
GGGCCAGTGTGATGGCTACTGCTTCGTTTCCTCGTGCTGCTGCTGCTGCT
GCAGCTGGTGCTGGTGCGACAGCTGAGTATGACCCTTCCCCCTTTCCGTC
CTCTTCCCTTGGTTGGACTCGAAATGAGGGGTGCTATATCCAACAACATC
AGCAGCAGCAACAGCGGCAGCAGCAACAGCAAGAAGGACGAGAGGAGGAA
GGAGAAGGAGGAGGCGTAGGAGAAGGATTCAAGCTACCTTACGCCAACAC
TCTCACCCTCCCCACCGGCCTCTCCTCCTCCTCTTCCTCCTCCTACTTTG
CCCGTGCTCGCTTTTCCTCCCTCCCCCCCTCTCCTCGTCGACCTCAGTAC
ATCGAGTTCGTCCCTTCTTTCAGTCTGCAGGGCCGGCAAGGGCCTCTTGC
TTTGGCCATCGAATGCAACGAGGAGGACGACGAGGAGCAGCAGGAAAAGG
AGCAGCAGCTGCTGCAGCAACAACAGCAGTACAAGCAGCAGTGGCAGAAT
CTCCAGGAGCAGCAGCAGTGTCACGTCTCAAGGCTGTACCATGAGGAAGA
GGTCATGGATGAGGAGGTGGAGGAAGGCGGACGTTTGCGTACTTTCACCT
TGCAGCCTAAAGGACCTTTCGGACTCGTATCCATGGCCGTAGGACGGGAG
GGAGGAAGGGAAAGAGGGAAGGAAGGTGAAAACAACATAAGCTCAAGGCC
GCCTTGGGCAGCGGCACCTGTCGAGCCCTCTTTGCTCGCCCTCTCTCCGT
TTTTTCCTCCCCAGTCGGAGCGGTATAAGCACCATTCCGTACCTTTCCCT
CCCGGCCTCCCTCCATCCCTCTCGCCCTCCCGCCCGGCCGTCACCAAGAC
GGTGCCAGCATTCCTGTCGCGGCGGGCACAGGAAGAGTTTGGGCATGAAT
AAAGGAGAGAGGGAGAGAGGGAAGGAGGGATGGGGTGGTGTTGTGTGTAA
GATAGCGGCCGGGGACTGTCTGTTTGTGTACATTTGTGTACACAGATGTC
TGTAAGTGTGTAGGCAGGTGTACAACGAAACGATAAACTACGAGCGAGGA
GACGGCTCATCCTCGACAAAGAAAGAAATGAGAGCGGGGTGCAACAGAGG
AGGAGAGAAGGAGGAACGTGACAGTAAATCAGTCAGTCTG
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protein sequence of NO23G01750.1

>NO23G01750.1-protein ID=NO23G01750.1-protein|Name=NO23G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1170bp
MPFLALPVRSFLNPFVSCQAVLARVSELHGPAHLPFLNFFAPFSPRHSLP
HSPPLPPSFLYHPIPPQYTARARRRGKHANMGIAGLLPLLKSVTHTVHLR
EYRGTTAGIDAFCWLHRGAFTCCTELVQGKTTDKYIRFCMERVRLLQEHG
VTPLLVFDGASLPSKRDLHLARRQARVEARAKALALHEEGQQGQARTFFQ
KAVVITHEMAYELMKALRAAGVRYVVAPYEADAQLAYLSRKGVVDIVITE
DSDTIPYGCRRVLFKLDKEGKAHEIESHNLALNDEHDFEGWTENMFLDMC
LLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKILQALRTMGGKTVIPPDYI
ENFARARLTFRHHYVYDLDEKCVVPLTPFAPAHLELDLGFLGPRHAHGLA
RDIAEGRVNPDTLARYEEEGEEEGEEGGKGSGGMEVGGVEIGDAAGAGVA
GAAAAAVEEMSAESHLEIQPRWGEQTGREGEREELKEVLLLAMGMEEEEA
LASVSSQCLGGRTLYAARQGYEEAARAAHRESTLRAERAVALIERRVREG
GCEGGEGGEGGFLVERGMGVRGTARQALVRPSGSEEAAESIATCRNIRSA
DSLMTQLAMPIVGRGRRRERWRKGGRAPAVSVKRRELWRFQDSPRKEDVE
EDEDQERQQQEHHHHQQHVQRQGKEERSLKGTHRNEHYHRFASSSSSSSS
SSSSSSSSSSSSSYFQHQRQPLGPPTVGLPPSCSSSATSHLSPHPPLSVA
SDHHHSCDKGREGDAGGGVLGGGREGGNAAASIHDAKAALGRWEEAERLR
RNAAADGAKGGKRSSGGNAVGATAAAAAAAAVALRPPMTSMDYQSPMVSD
HLETLQRRRKRKKKTGGMLGASVMATASFPRAAAAAAAGAGATAEYDPSP
FPSSSLGWTRNEGCYIQQHQQQQQRQQQQQEGREEEGEGGGVGEGFKLPY
ANTLTLPTGLSSSSSSSYFARARFSSLPPSPRRPQYIEFVPSFSLQGRQG
PLALAIECNEEDDEEQQEKEQQLLQQQQQYKQQWQNLQEQQQCHVSRLYH
EEEVMDEEVEEGGRLRTFTLQPKGPFGLVSMAVGREGGRERGKEGENNIS
SRPPWAAAPVEPSLLALSPFFPPQSERYKHHSVPFPPGLPPSLSPSRPAV
TKTVPAFLSRRAQEEFGHE*
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Synonyms
Publications