NO23G01570, NO23G01570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01570 vs. NCBI_GenBank
Match: EWM27839.1 (flap endonuclease-1 [Nannochloropsis gaditana]) HSP 1 Score: 615.5 bits (1586), Expect = 1.500e-172 Identity = 330/484 (68.18%), Postives = 359/484 (74.17%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSGGAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMTSAGDNPIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKS-AVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPSG 484 MGIKGLTKLIADEAP+AIKEHKVEHYNGR +AVDASMAIYQFLIAIRHG+ G AA+QLTNEAGEVTSHIQGLFNRTIRML+SGIKPVFVFDGKPPTLKGGELDKRREKREKAE++LKKAQEEANVEEQDRQ+KRLVRAGKKESADCK+LLELMGVP+L+APCEAEAQCA LAKI KV+AVATEDTDTLTFATPRLLRNMTSAGDNPIKEIDYKK+LEGL LT +QFIDLCILMGCDYTS+IRGIGPKSAL LIKK+GDIE +L+++ K K+Q+PPEWLPR++VRK S + ARE APDE K+V GE V + PAYVMAR LF PEIHDPAE +FKW EPNEAGLE FLID+LGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPSG Sbjct: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPXXXXXVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGE--------------------------------------------------VMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPSG 434
BLAST of NO23G01570 vs. NCBI_GenBank
Match: CBJ29727.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 367.5 bits (942), Expect = 6.900e-98 Identity = 251/480 (52.29%), Postives = 306/480 (63.75%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSGGAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMTSAGDN-PIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQQKRLDSFF 480 MGI GLTKL++DEAP+ +KE ++ GR +AVDASMA+YQFLIA+R G G + LTNEAGEVTSHIQG+FNRTIRMLS G+KP ++FDGKPP LKGGEL KR KR KAEA+LK A E + + D+ +KRLVR + + DCK+LL LMGVP + AP EAEAQCA LA+ V+ ATED D LTF TP+LLR MT +G N PI E+DY+K+L+GL+L+ +F+DLC+L GCDYT SI+GIGPK AL L+++HG IE I+KHL K+ +P +WL XXXXXXXXXXXXXXXXXXXXXXX + V E XXXXXXXXXXX XXXXXXX E D P Y AR LF PE+ E KWT+P+E GL +FL++ GFN +RV SGI KLK +R + QKR+DSFF Sbjct: 1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE-GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWL---------------------------------EPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPEAVSEEDVQQKEGXXXXXXXXXXXPDHGVSVAKEAADVSAKRXXXXXXXXXXXQEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFF 446
BLAST of NO23G01570 vs. NCBI_GenBank
Match: EJK66115.1 (hypothetical protein THAOC_12982 [Thalassiosira oceanica]) HSP 1 Score: 367.5 bits (942), Expect = 6.900e-98 Identity = 221/483 (45.76%), Postives = 273/483 (56.52%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSGGAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFF 480 MGIKGL KL++DEAPD+I+E + +GR IAVDASMAIYQ LIAIR GN AA LTN GE TSHIQG+FNRTI+ ++ GI+PV+VFDGKPP+ K GEL KRREKR+KAE LK A+E +VEEQD+ KRLVRAG KE+ D KRLL LMGVP ++APCEAEAQ A LAK KV+A ATED D LTF TP +R MT A I+E++Y K L GL L QF+DLCIL+GCDY +I+GIGPK+AL LIK+H +IETILK L ++K+ +P + P V RK + S N TA K KT EGEE E + P YV AR LF+ E+ +E KW + L+ FL+D +GFNP+RV+S I KL+ + + Q R+DSFF Sbjct: 1 MGIKGLAKLLSDEAPDSIREVPLSSLHGRKIAVDASMAIYQMLIAIRSGNPNMAATVLTNADGETTSHIQGIFNRTIKFITEGIRPVYVFDGKPPSFKSGELLKRREKRQKAEEALKAAEESGDVEEQDKHTKRLVRAGHKENEDIKRLLTLMGVPIINAPCEAEAQAAALAKAGKVYATATEDMDALTFQTPIQVRKMTFAKASQAEIQEVNYSKALIGLGLNHDQFVDLCILLGCDYCDTIKGIGPKTALKLIKEHNNIETILKTLNREKYTVPESYEPNVAARKRQLEEDGDSD------------------------------------------NEDATAKTGKPKT-----------------------------------------------EGEEDEEI--LPVYVEARKLFNSHEVLPDSEIELKWKDCQPEQLKAFLVDEMGFNPERVQSNIEKLQKAHKTSKKPQMRMDSFF 392
BLAST of NO23G01570 vs. NCBI_GenBank
Match: GAX22215.1 (flap endonuclease-1 [Fistulifera solaris]) HSP 1 Score: 360.9 bits (925), Expect = 6.500e-96 Identity = 214/484 (44.21%), Postives = 277/484 (57.23%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSG-GAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFF 480 MGIKGL KLI+DEAPDAI+E +++ +GR IA+DASMAIYQFLIA+R N G G + LTN GE TSHIQG+FNRTIR ++ GIKPVFVFDGKPP +K GEL KRREKREKA+ L+ A EE NVEEQD+ +KRLVRAG+KE+ DC++LL LMGVP + APCEAEAQ A LAK V+A TED D LTF TP L+R MT SA + ++ ++Y K LEG+ LT +QF+DLCI++GCDY +I+G+GPK+AL LI++HG IE ILKHL K+ +P WLP + +E S+ ++E +V + + PAYV+AR +F+ E+ A+ KW L +FL+D +GFNPDRV S I KL+A+ A + Q R+D+FF Sbjct: 1 MGIKGLAKLISDEAPDAIREVELKSLHGRKIAIDASMAIYQFLIAVRSNNGGQGQSFMLTNAEGETTSHIQGMFNRTIRYMTEGIKPVFVFDGKPPEVKSGELLKRREKREKAQLALQVATEEGNVEEQDKHSKRLVRAGQKENDDCQKLLRLMGVPVVLAPCEAEAQAAALAKAGLVYAAGTEDMDALTFQTPVLVRKMTFASASKSMVQTMNYAKALEGMNLTQAQFVDLCIMLGCDYCDTIKGVGPKTALKLIREHGCIENILKHLDGKKYVVPESWLPPPKEAEESSS--------------------------------------------------------DQENSVSDD--------------------------------------------------LQPIPAYVLARRMFNEHEVLMHAD--LKWKPCEREALTKFLVDEMGFNPDRVASSIDKLEAAYKANKAPQTRMDAFF 376
BLAST of NO23G01570 vs. NCBI_GenBank
Match: GAX19694.1 (flap endonuclease-1 [Fistulifera solaris]) HSP 1 Score: 355.1 bits (910), Expect = 3.600e-94 Identity = 214/484 (44.21%), Postives = 274/484 (56.61%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSG-GAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFF 480 MGIKGL KLI+DEAPDAI+E +++ +GR IA+DASMAIYQFLIA+R N G G + LTN GE TSHIQG+FNRTIR ++ GIKPVFVFDGKPP +K GEL KRREKREKA+ L+ A EE NVEEQD+ +KRLVRAG+KE+ DC++LL+LMGVP + APCEAEAQ A LAK V+A TED D LTF TP L+R MT SA + ++ ++Y K LEG+ LT +QF+DLCI++GCDY +I+G+GPK+AL LI++HG IE ILKHL K+ +P WLP P+ A ++E +V + PAYV+AR +F+ E+ AE KW L +FL+ +GFNPDRV S I KL+A+ A + Q R+D+FF Sbjct: 1 MGIKGLAKLISDEAPDAIREVELKSLHGRKIAIDASMAIYQFLIAVRSNNGGQGQSFMLTNAEGETTSHIQGMFNRTIRYMTEGIKPVFVFDGKPPEVKSGELLKRREKREKAQLALQVATEEGNVEEQDKHSKRLVRAGQKENDDCQKLLKLMGVPVVLAPCEAEAQAAALAKAGLVYAAGTEDMDALTFQTPVLVRKMTFASASKSMVQTMNYAKALEGMNLTQAQFVDLCIMLGCDYCDTIKGVGPKTALKLIREHGCIENILKHLDGKKYVVPESWLP------------PPAE-----------------------------------------------AESDQENSVSDDH--------------------------------------------------QPIPAYVLARRMFNEHEVLTHAE--LKWKPCEREELTKFLVGEMGFNPDRVASSIDKLEAAYKANKAPQTRMDAFF 373
BLAST of NO23G01570 vs. NCBI_GenBank
Match: XP_002183226.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >B7G7Y7.1 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap structure-specific endonuclease 1 >EEC45444.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 353.2 bits (905), Expect = 1.400e-93 Identity = 208/483 (43.06%), Postives = 276/483 (57.14%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSGGAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKAS--RGAMQQKRLDSFF 480 MGIKGL KL++DEAPD I+E +++ +GR IA+DASMAIYQFLIA+R G A LTN GE TSHIQG+FNRTIR ++ GI+PVFVFDGKPP +K EL KRREKREKA+A L A EE NVEEQD+Q+KRLVRAG KE+ DC++LL LMGVP + APCEAEAQ A L K V+A TED D LTFATP L+R +T +A + ++ ++Y KV+EGL ++ QF+DLCI++GCDY +IRG+GPK+AL LI++HG+IE +++ + + KF +P W+P K+ A S XX E+ E+ +V + + PAYV AR LF+ E+ + E KW L++FL+D++GFN DRVK+ I KL+A+ + Q R+DSFF Sbjct: 1 MGIKGLAKLLSDEAPDCIREVELKSLHGRKIAIDASMAIYQFLIAVRSGGPNQQATMLTNAEGETTSHIQGMFNRTIRYMTEGIRPVFVFDGKPPDVKSHELIKRREKREKAQAALAVASEEGNVEEQDKQSKRLVRAGTKENEDCRKLLTLMGVPVVTAPCEAEAQAAALCKAGLVYATGTEDMDALTFATPILVRKLTFANASKSMVQTMNYNKVIEGLAISHDQFVDLCIMLGCDYCDTIRGVGPKTALKLIREHGNIEKVIETIDRKKFVVPESWVPN---EKKLDAQSD-----------------------------------------DXXXEGVESPSKEENNGIV--------------------------------------------------DTEELIPAYVQARKLFNEHEVLNDIE--LKWKPCQAEDLQKFLVDDMGFNVDRVKNNIEKLQAAYKANSKPQTRMDSFF 387
BLAST of NO23G01570 vs. NCBI_GenBank
Match: XP_002292004.1 (exonuclease [Thalassiosira pseudonana CCMP1335] >B8C6S5.1 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap structure-specific endonuclease 1 >EED90855.1 exonuclease [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 347.8 bits (891), Expect = 5.700e-92 Identity = 207/486 (42.59%), Postives = 262/486 (53.91%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSGG--AAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKAS--RGAMQQKRLDSFFK 481 MGIKGL KL++DEAP ++KE + H +GR +A+DASMAIYQFLIA+R G GG AA LTN GE TSHIQG+FNRTIR +S GI+PV+VFDGKPP K GEL KRREKR KAE LK A+E N+EEQD+Q+KRLVRAG KE+ DC +LL LMGVP + APCEAEAQ A LA+ KV+A ATED D LTF +P ++R MT +A + +++I Y K +EGL++T QF+DLCIL+GCDY +I+GIGPK+AL LI++H +IETILKHL ++K+ +P YV AR LF+H E+ E KWTE L+ FL+D +GFNPDRV++ I KL+ + A Q R+DSFFK Sbjct: 1 MGIKGLAKLLSDEAPLSLKEVPLSHLHGRKLAIDASMAIYQFLIAVRSGGPGGQNAAMMLTNADGETTSHIQGIFNRTIRFISEGIRPVYVFDGKPPQFKSGELLKRREKRLKAEQALKAAEESGNIEEQDKQSKRLVRAGTKENEDCIKLLTLMGVPVIRAPCEAEAQAAALARSGKVYAAATEDMDALTFRSPVMVRKMTFANASKSDVQQIFYDKAIEGLEITHDQFVDLCILLGCDYCDTIKGIGPKTALKLIREHKNIETILKHLNREKYVVP--------------------------------------------------------------------------------------------------------------------------------------DIYVEARRLFNHHEVLPDNEIELKWTECQPEPLKSFLVDEMGFNPDRVQASIEKLQKAFKASAKPQSRMDSFFK 352
BLAST of NO23G01570 vs. NCBI_GenBank
Match: OQR97778.1 (flap endonuclease 1 [Achlya hypogyna]) HSP 1 Score: 344.4 bits (882), Expect = 6.300e-91 Identity = 204/481 (42.41%), Postives = 252/481 (52.39%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSGGAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMTSAGDN--PIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQQKRLDSFF 480 MGIKGL KL+ DEAP +KE ++ +GR +A+DASMA+YQFLIA+R GG AAQLTNEAGEVTSHIQG+FNRTIR++ +G+KPV+VFDGKPP +K GEL KR E+R++A+A LK A EE N E+ D+ KRLVRA + S DCK LL LMG+PF+ APCEAEA CA LAK KVFA TED D +TF TP L R +T A PI EI +KVL+ L L+ QF+DLCIL GCDY +I GIGPK ALN IK+H IE L HL K +PS T P +W+ + Y AR++F E+ D + FKW EPN L FL+D GFN DRV +GI KLK ++ + Q+RL+SFF Sbjct: 1 MGIKGLMKLLTDEAPSCVKEMQMSQLSGRSVAIDASMALYQFLIAVRSAGEGGGAAQLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQASLKAATEEGNQEDIDKFTKRLVRATPQHSEDCKELLGLMGIPFITAPCEAEATCAALAKAGKVFAAGTEDMDVVTFGTPVLFRRLTIAASRKLPILEIRIEKVLQELNLSYEQFVDLCILCGCDYCDTIFGIGPKKALNAIKEHKSIENFLAHLEK-----------------------NPSKGV--------------------------------------------TVPQ---------------------------------------------------------DWLGEDAIYKQARSMFIEAEVADVSTIDFKWKEPNVDELRAFLVDKHGFNADRVLNGIEKLKKAKTSHSQQRLESFF 357
BLAST of NO23G01570 vs. NCBI_GenBank
Match: XP_012198398.1 (hypothetical protein SPRG_04596 [Saprolegnia parasitica CBS 223.65] >KDO30694.1 hypothetical protein SPRG_04596 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 340.9 bits (873), Expect = 6.900e-90 Identity = 203/481 (42.20%), Postives = 252/481 (52.39%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIRHGNSGGAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMTSAGDN--PIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQQKRLDSFF 480 MGIKGL KL+ DEAP +KE ++ +GR +A+DASMA+YQFLIA+R GG AAQLTNEAGEVTSHIQG+FNRTIR++ +G+KPV+VFDGKPP +K GEL KR E+R++A+A+LK A EE N ++ D+ KRLVRA + S DCK LL LMGVPF+ APCEAEA CA LAK KVFA TED D +TF TP L R +T A PI EI +KVLE L LT QF+DLCIL GCDY +I GIGPK ALN IK+H IE + HL K PS T P +W+ + Y AR +F E+ D +E FKW +PN L FL++ GFN +RV +GI KLK ++ + Q+RL+SFF Sbjct: 1 MGIKGLMKLLTDEAPSCVKEMQMSQLSGRSVAIDASMALYQFLIAVRSTGDGGGAAQLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQANLKTATEEGNQDDIDKFTKRLVRATPQHSEDCKELLGLMGVPFITAPCEAEATCAALAKAKKVFAAGTEDMDVVTFGTPVLFRRLTIAASRKLPILEIRLEKVLEELNLTYEQFVDLCILCGCDYCDTIFGIGPKKALNAIKEHKTIENFIAHLEK-----------------------HPSKGV--------------------------------------------TVPQ---------------------------------------------------------DWLGEDAIYKQARGMFIEAEVADVSEIDFKWKDPNVDELRAFLVEKHGFNAERVLNGIEKLKKAKTSHSQQRLESFF 357
BLAST of NO23G01570 vs. NCBI_GenBank
Match: OQR90044.1 (flap endonuclease 1 [Thraustotheca clavata]) HSP 1 Score: 338.6 bits (867), Expect = 3.400e-89 Identity = 202/482 (41.91%), Postives = 254/482 (52.70%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPDAIKEHKVEHYNGRIIAVDASMAIYQFLIAIR-HGNSGGAAAQLTNEAGEVTSHIQGLFNRTIRMLSSGIKPVFVFDGKPPTLKGGELDKRREKREKAEADLKKAQEEANVEEQDRQNKRLVRAGKKESADCKRLLELMGVPFLDAPCEAEAQCAGLAKISKVFAVATEDTDTLTFATPRLLRNMTSAGDN--PIKEIDYKKVLEGLQLTPSQFIDLCILMGCDYTSSIRGIGPKSALNLIKKHGDIETILKHLPKDKFQIPPEWLPRVRVRKEKSAVSSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNARETAPDEKEKTVVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEEWEWVDQTPAYVMARTLFSHPEIHDPAEQSFKWTEPNEAGLEEFLIDNLGFNPDRVKSGIAKLKASRGAMQQKRLDSFF 480 MGIKGL KL+ DEAP +KE ++ +GR +A+DASMA+YQFLIA+R +G+ GG A LTNEAGEVTSHIQG+FNRTIR++ +G+KPV+VFDGKPP +K GEL KR E+R++A+A LK A EE N E+ D+ KRLVRA + + DCK LL LMG+PFL APCEAEA CA LAK KVFA TED D +TF TP L R +T A PI EI +KVL+ L LT QF+DLCIL GCDY +I GIGPK ALN I++H IE L HL K PS T P +W+ + Y AR++F + E+ D AE FKW EP+ L FL++ GFN DRV +GI KLK ++ + Q+RL++FF Sbjct: 1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQASLKTATEEGNTEDIDKFTKRLVRATPQHNEDCKELLGLMGIPFLTAPCEAEATCAALAKAGKVFAAGTEDMDVITFGTPVLFRRLTIAASRKLPILEIRLEKVLQELNLTYEQFVDLCILCGCDYCETIFGIGPKKALNAIREHKSIENFLAHLEK-----------------------HPSKGV--------------------------------------------TVPH---------------------------------------------------------DWLGEDAIYKQARSMFINAEVSDTAEIDFKWKEPSVDELRAFLVEKHGFNADRVMNGIEKLKKAKTSHSQQRLENFF 358 The following BLAST results are available for this feature:
BLAST of NO23G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01570 ID=NO23G01570|Name=NO23G01570|organism=Nannochloropsis oceanica|type=gene|length=4392bpback to top protein sequence of NO23G01570.1 >NO23G01570.1-protein ID=NO23G01570.1-protein|Name=NO23G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bpback to top Synonyms
Publications
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