NO23G01490, NO23G01490 (gene) Nannochloropsis oceanica

Overview
NameNO23G01490
Unique NameNO23G01490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3834
Alignment locationchr23:544589..548422 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:544589..548422 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR062ncniR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01490.1NO23G01490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01490.1NO23G01490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01490 ID=NO23G01490|Name=NO23G01490|organism=Nannochloropsis oceanica|type=gene|length=3834bp
AGGCCCCCCACTTTCTGTAACTCCGTAAACACACCCTACGGGGACACACA
TACGCACTCACACACACACATAGGGAGGAGATAGTCATAATGCGCTCAAG
GGGAAAGTCGATCGATGCAGCCTTTTTTTACCCTTGCAGTTAGGAGAGAG
GGGCATGAACGAGAAGCAGCACGCGTGTGAAAGGGGAGCGAAAGCAAGCA
GTATTCCGACCTCTTCGCACATGGACAAGGACAAGGGCACACACAGACGG
TACTCAGACAGGACCCTGGGCAATGAGCGTGTGTGAGAATGGGCCATGGC
TTAGCTTGCGCCAGACCGGCTAAGGCGCCATTCTTTTTGCGAACTTTGTC
ACACCCCTCATGGTAAAGAGGTACAACACGAGCTCCTGTTGGTATGCCAT
TTGTTGCATCCACCAGTACATCTCCAGGGCGCGCATGCACGCATGGATTC
GCTATGTGCAAAGGGGCGTTGACATGTGCTACATCCTTGCAACGGTAGCG
GCAGCCTCAGCCTTTCATCCCGCTCCTTGACTGGCGCCAGACGATGATGA
GATAACGACTGCCTCTAATCGCAGACACACACACCCCGACAACCCACACA
TCTCCCTTCCCTCCCTCCCTCTCTCCCAACTACAGGGCTAGGAGAAGCGA
TGAATCCTCCAATGCCCCCAACACTGCTGCCACCGCCATCAACAGCACAA
GCACTAGGAGGGAGCACTCTCCAGCAGCAGCAGCAGCAGCCGAGACGACG
GAGCGACCCTCTCCGTTCCGGTGCTATCTTCAATGCGGACTTTCTCAAGA
CCCTCCAATCGCCCATGCCGCGCATTGCTGTCTCCTCCTCTACCTCCTCC
TCTACAACGACTCCAGGAGCAACGGGAGAAGCAGCAGCAGCGAGAGCAGC
AGCAGGAGGAGGAGGAGGACTGCTGGCGGCCTTGCCTATCCTGGGCAGTG
GGGGTGTAGGACGAGGAGGAGGAATTGGGGGAAGGCGAGGTAGCCGTGGC
TTCAGCCTTGGAACTGCTTCCGTCCCTCCCATCTTCCAATGCCCCTCCTC
CTCTTCCTCCTTGACCTCCCCTGCTCTCCCCCCCTCCCTCCCTCCTCCAG
CGGCAGCGGCCGTTGCCATGCCAATTCCTGTGTACGCGTATGGAGGGAGT
GCGGGGTTGATGAACAAGACATTTGACGACCTCTGTCAGGCCTCCCCGAT
GCCGCAGTGTGTGAGACGGGCCGTACTGAGGGGGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGAGGGAGCAGTGGAGGTGACGCGTTTTCGGCGGGG
AGAGAGGGAAGAAGGGATGAAGGGGTAGGAGCAATAACGTTCAAGAGACC
CATAAGCACGACGCCGGTAGGAGGAGGAGGAAGGGGGGTAGGGAGGGAGG
GAGGGAGTGGGAGTAATGTGGGAGGGGAAAAGAATAACAGCGCGCAGACT
TTTGAGGGCGTGGATGAGGGAGAGAAGAAGGGACAGGAAGAAGGAGGGAT
GATGGGAATTGATCGGAAGGAGGAGGAAAGGGAGGAGGGTGGGGGCGGGG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCTGCGGGATAC
GGAACACCGAGAAGCAGCCTTCTTTTCCTTTCTCCCTCCCTCCCTCCCTC
CCGCGGACGCAGCAGTGGCAGTAGCAGACGCATTGCGCCCGGGAAGGACG
ACGGAATGGAAGTTGGGGGGCAGGGAGGGGGGGAGGAAGGGGAGAGCTTT
GTGAGTGAGTGGGACGGAACGCCCTTGCCGTTAAGAGTGAAACCGACGAA
AACGGCCAAGGCGACTGGTCCTGAGGAGGAGGACGACGACGAGGGAGAGG
CTGAGGACGAGGAAGAAGAGGGATTTGGCGgtgtgagaatgaatggaagg
aagatcacagggagggagggagggaggggggggggtcgctgtgggtggca
gCATCGAAAGAGGACGTGGGAGGGCGTGGGGGGGGAAGGAGAAGGAGTAG
TTCGTTGGATGAAGCAAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAC
TCATGCCACCACCACCTTCTTCCGCACTGAAGAGACAACAACAACAACCG
CAGCAGCAGCAGCAGCAGCAGCAGCGGAAGAAAAGAGTTTCGTTGTCATC
CACCAACACTTTCCCCTCTCCTGCCTCCATCCCCTCCTCCCGCCCTTCCT
CCCTCCATCCCTCCTCCTCCTCGGCTGGCAAGAGGCTACGTAATAGCAGC
AGCAGCAGCAGCAGTACGACAAACACCCCAAGCACCAGCAGTGGGAGAAA
GAGGAAGAAGAGGACTTTTCTCGACGAGGAAATAGAGGAGGAAGAGGTGG
ATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTAGGCCTTAGGAGGAAG
ACAACCTCGCTCGGCTCGTTGGCAGGCGCGAACTTCCCTTCCCCTCCTCC
TGGCCCTCCCTCCGTCCCTCCATCTCTTCCTGCCTCCGTAGGTAGAAAGG
AAAGCAGCAGGCCTGGGAAGGTCGAAGAGAAGGAGGGAGGGAAAGAGGGA
GGGAAGGAGGGAAAGGGAGCACCCGTACTTCATTCAGTGCGTCGGAGGAG
CAGCAGTGATAGCAAGAAGAGGGGGGCGAAGGGCGAGGAAAGGAGGGAGG
GAGGAATGGAAGGAAGGAGGAAGAAGGAGAAGAAGAGGAAGAGGAAGAGG
AAGGAGGGCAGCACCGGCAGTGAGGGATCGAGGAAGGGAGGGAGGGAGGG
AGGGAGGGACAAGAGGAGGACGGGAGGATCTACGGGCTCAGTTGTGTCCG
TTTCTTCTGCTGCGTCTTCAAGGGGTGAAGGAGGGAGGGAGAGAGGGAGG
GAGGGAGGGAGGGAGGGAAAAAAGGGCGGGGGCCTGTACGGGGGCATTTT
GGCGATGCTGGGGGACGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGAGAGAGAGGGTGGAAGGGAGGGGTCACCCC
GCCTCTTTGATGCCTCCCCCTCCCCCGCGACCTCGCCCCAGGGGAGGCAG
CAAGGGCGAGGAAGGGAGCGAGGCGGGGACCGAGGGAGGGAGGGAGAGCG
AGACGGAACGGCGGTTGAAGAAAGCGGAGCTGATGATCACTGTTCGGCAC
CGTTCCAAGAACAGCAGCTCGACCTCTCCCCCGCCCTCCCTCCCGTCCTC
CCTCCCGTCCTCCGCCGAGAAGGAGAATGGCAGGGAGCAGAGGAAGAGAA
ACACCAGATTGATTTCCCTTTCTCCATCCCCCTCCTCCCCCCCCTCCCCT
CCGCTCTCCCTCCCTCCCTCCATCACCATCGCCCGAGGCCGTTCAGGAAG
AGTGCGCGTGCCTCTACTGAACTCCCTTTCCTCTTCCACCCCATCCTCTC
CCCCTGTCTCCCTCCCTCCCTCCATCACCGCCTCCCGTGGCCATGCGCCC
TCTTCCTCCTCTCCTCCTTCCCCCCCTCCCTCCCCGGGGAAAGAGGAGGG
AGGTAGGGAGGGAGGAAAGAGGGTCCGATTGCCTGTCCTGGATTTCTGGA
GGTCGCAACATGCTGTGGTGAGTGAGGGAGGAGAGGTGTTGAGGCTGGTG
GAGGGGACGCCCGATGCGTTGGGAGGGAGAGAGGGAGGGAGGGAGGGCGG
GCGCCGAGGAAGCCGGGGGTCTTCCCATTTGAAGAAGAAGAAGGAGGAGA
CGGAGAAGGAGAAGGAGAGGAACGGGCTGTCTTCAGGCTTGCCTGCGTCG
CCGCCTTTTCTCCGGGAGGATGGGAGGGAAGGGGGGAGGAGGAGGAGGAG
GAAGAAGAAGAGGAAGCTCAAGAGGCGAAGGTGA
back to top

protein sequence of NO23G01490.1

>NO23G01490.1-protein ID=NO23G01490.1-protein|Name=NO23G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1038bp
MNPPMPPTLLPPPSTAQALGGSTLQQQQQQPRRRSDPLRSGAIFNADFLK
TLQSPMPRIAVSSSTSSSTTTPGATGEAAAARAAAGGGGGLLAALPILGS
GGVGRGGGIGGRRGSRGFSLGTASVPPIFQCPSSSSSLTSPALPPSLPPP
AAAAVAMPIPVYAYGGSAGLMNKTFDDLCQASPMPQCVRRAVLRGGGREG
GREGGRGSSGGDAFSAGREGRRDEGVGAITFKRPISTTPVGGGGRGVGRE
GGSGSNVGGEKNNSAQTFEGVDEGEKKGQEEGGMMGIDRKEEEREEGGGG
AAAAAAAAAAAAAAAGYGTPRSSLLFLSPSLPPSRGRSSGSSRRIAPGKD
DGMEVGGQGGGEEGESFVSEWDGTPLPLRVKPTKTAKATGPEEEDDDEGE
AEDEEEEGFGASKEDVGGRGGGRRRSSSLDEAKAAAAAAAAAALMPPPPS
SALKRQQQQPQQQQQQQQRKKRVSLSSTNTFPSPASIPSSRPSSLHPSSS
SAGKRLRNSSSSSSSTTNTPSTSSGRKRKKRTFLDEEIEEEEVDAAAAAA
AAAAVGLRRKTTSLGSLAGANFPSPPPGPPSVPPSLPASVGRKESSRPGK
VEEKEGGKEGGKEGKGAPVLHSVRRRSSSDSKKRGAKGEERREGGMEGRR
KKEKKRKRKRKEGSTGSEGSRKGGREGGRDKRRTGGSTGSVVSVSSAASS
RGEGGRERGREGGREGKKGGGLYGGILAMLGDEEEEEEEEEEEEEEEEEE
RERVEGRGHPASLMPPPPPRPRPRGGSKGEEGSEAGTEGGRESETERRLK
KAELMITVRHRSKNSSSTSPPPSLPSSLPSSAEKENGREQRKRNTRLISL
SPSPSSPPSPPLSLPPSITIARGRSGRVRVPLLNSLSSSTPSSPPVSLPP
SITASRGHAPSSSSPPSPPPSPGKEEGGREGGKRVRLPVLDFWRSQHAVV
SEGGEVLRLVEGTPDALGGREGGREGGRRGSRGSSHLKKKKEETEKEKER
NGLSSGLPASPPFLREDGREGGRRRRRKKKRKLKRRR*
back to top
Synonyms
Publications