NO23G01330, NO23G01330 (gene) Nannochloropsis oceanica

Overview
NameNO23G01330
Unique NameNO23G01330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3133
Alignment locationchr23:481864..484996 +

Link to JBrowse

Properties
Property NameValue
Descriptioninitiator tRNA phosphoribosyl transferase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:481864..484996 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0019988charged-tRNA amino acid modification
GO:0019988charged-tRNA amino acid modification
Vocabulary: Molecular Function
TermDefinition
GO:0043399tRNA A64-2'-O-ribosylphosphate transferase activity
GO:0043399tRNA A64-2'-O-ribosylphosphate transferase activity
GO:0016763transferase activity, transferring pentosyl groups
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR007306Rit1
IPR033449Rit1_N
Homology
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: XP_015643696.1 (PREDICTED: tRNA A64-2'-O-ribosylphosphate transferase [Oryza sativa Japonica Group] >BAD53550.1 putative initiator tRNA phosphoribosyl-transferase [Oryza sativa Japonica Group] >BAF19766.1 Os06g0555500 [Oryza sativa Japonica Group] >BAG95523.1 unnamed protein product [Oryza sativa Japonica Group] >BAG97758.1 unnamed protein product [Oryza sativa Japonica Group] >EEC80806.1 hypothetical protein OsI_23355 [Oryza sativa Indica Group] >BAS98219.1 Os06g0555500 [Oryza sativa Japonica Group])

HSP 1 Score: 165.6 bits (418), Expect = 4.200e-37
Identity = 117/312 (37.50%), Postives = 145/312 (46.47%), Query Frame = 0 
Query:   35 PSTLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            PSTLS+ K  RR+ ++    L N L+S+  DA FV  +   +                    ANLR G WYLPP      CYFKSTDGH+G W+FS++RLNLHLAL A + GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G      ++  S  +  R   L   K  RPLW+     +++  +P L S DF P++ VSAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   18 PSTLSIYKAARRIKRR-ESTLYNALRSVADDAAFVAEIAALW--------------PALPLVANLRCGLWYLPPRAVAATCYFKSTDGHAGNWAFSTARLNLHLALLAGERGGCIIVDSTRRGKRFPDSMSKTIPIWCCV------------------LNRAIERYRLQTNNKSAAVANKDAEKISESSNWDNSVHLPVWVLETEKNAIEGRIEEWTTQFESCGADIRSLALSLKKPLRPLWISQRTRIWLNEVPELESWDFTPIILVSASASGAVATQRMTSEFSWHYIPGAGDDEESWA-RGLTPTLFWK 295
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: XP_004965603.2 (tRNA A64-2'-O-ribosylphosphate transferase isoform X1 [Setaria italica] >KQL11006.1 hypothetical protein SETIT_006195mg [Setaria italica])

HSP 1 Score: 159.1 bits (401), Expect = 4.000e-35
Identity = 112/311 (36.01%), Postives = 141/311 (45.34%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  RR+ ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A   GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G       +  S  +      +   K  RPLW+     +++  +P L S DF P++ +SAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   14 ATLSIYKAARRIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PALPLVANLRCGLWYAPPRSFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGDRGGCIIVDSTRKGKRFPDSMSKTIPIWCCVLNRAIERHRLRTIHDGGKVNYEVSSSVLNGDAENNSC----------SSNWDSSVHLPVWVLGTEKNAIEGHIEEWTDQFESCGADIHSLAVNLQKPLRPLWISQRTRIWLNEVPELESWDFTPIILISASASNAVAMQRMSSEFSWQYIAGAGDDEESWA-RGLTPTLFWK 298
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: XP_004965604.2 (tRNA A64-2'-O-ribosylphosphate transferase isoform X2 [Setaria italica])

HSP 1 Score: 159.1 bits (401), Expect = 4.000e-35
Identity = 112/311 (36.01%), Postives = 141/311 (45.34%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  RR+ ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A   GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G       +  S  +      +   K  RPLW+     +++  +P L S DF P++ +SAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   14 ATLSIYKAARRIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PALPLVANLRCGLWYAPPRSFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGDRGGCIIVDSTRKGKRFPDSMSKTIPIWCCVLNRAIERHRLRTIHDGGKVNYEVSSSVLNGDAENNSC----------SSNWDSSVHLPVWVLGTEKNAIEGHIEEWTDQFESCGADIHSLAVNLQKPLRPLWISQRTRIWLNEVPELESWDFTPIILISASASNAVAMQRMSSEFSWQYIAGAGDDEESWA-RGLTPTLFWK 298
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: XP_008659676.2 (LOW QUALITY PROTEIN: tRNA A64-2'-O-ribosylphosphate transferase [Zea mays])

HSP 1 Score: 158.7 bits (400), Expect = 5.200e-35
Identity = 110/311 (35.37%), Postives = 144/311 (46.30%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-----SERARVEALLPCFYSTLKKALSGTSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHREHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  R + ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A + GG IIVDSTR GK FPDS++ T+PIW +V                                              P     +E+  +E  +  +    +    G  + S     L+   QK L      RPLW+     +++  +P L S DF P++ +SAS           FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   16 ATLSVYKAARCIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PSLPLVANLRCGLWYAPPRAFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGERGGCIIVDSTRRGKRFPDSMSKTIPIWCSVLNRAIERHRLQAIHKSAEVNYQSSTLLNGDAENNSDLSNWDSSVHLPVWVLGTEKNAIEGRIDEWTDQFESC--GADIHS-----LAVGLQKPL------RPLWISQRTRIWLNEVPELESWDFTPIILISASDAVATQRMSSEFSWHYIPGAGDDEESWA-RGLTPTLFWK 297
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: XP_015693743.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C3F10.06c [Oryza brachyantha])

HSP 1 Score: 157.5 bits (397), Expect = 1.200e-34
Identity = 113/311 (36.33%), Postives = 142/311 (45.66%), Query Frame = 0 
Query:   35 PSTLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAV--RGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCFYSTLKKALSGTSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            PSTLS+ K  RR+ ++    L N L+S+  DA FV  +   +  X                   LR G WY P       CYFKSTDGH+G W+FS++RLNLHLAL A + GG IIVDSTR GK FPDS++ T+PIW  V  R                                              +   R+E  L  F           S  +++ SL  C R       K  RPLW+     +++  +P L S +F P++ VSAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   16 PSTLSIYKAARRIKRR-ESTLYNALRSVADDAAFVAEIAALWPGXPWPPP--------------LRCGLWYAPQRAVAATCYFKSTDGHAGNWAFSTARLNLHLALLAGERGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERHRLQTINQSAAVPNKETERISASSNWDSSVHLPVWVLDTEKNAIEGRIEDWLTQF----------ESCGADIHSLALCLR-------KPLRPLWISQKSRIWLNEVPELESWNFTPIILVSASASGAVATQRMTSEFSWHYIPGAGDDEESWA-RGLTPTLFWK 293
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: PAN23735.1 (hypothetical protein PAHAL_D02583 [Panicum hallii])

HSP 1 Score: 157.1 bits (396), Expect = 1.500e-34
Identity = 110/311 (35.37%), Postives = 141/311 (45.34%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  R + ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A   GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G       +  S  +      +   K  RPLW+     +++  +P + S DF+P++ +SAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   14 ATLSIYKAARSIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PALPLVANLRCGLWYAPPRAFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGNRGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERHRLRAIHKGGEVNCEVSSTMLNGETKSNSF----------SSNWDSSVHLPVWVLGTEKNAIEGRIEEWTDQFESCGADIHSLAISLQKPLRPLWISQRTRIWLNEVPEIESWDFIPIILISASASDAVATQRMSSEFSWQYIPGAGDDEESWA-RGLTPTLFWK 298
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: PAN23732.1 (hypothetical protein PAHAL_D02583 [Panicum hallii] >PUZ60309.1 hypothetical protein GQ55_4G113200 [Panicum hallii var. hallii])

HSP 1 Score: 157.1 bits (396), Expect = 1.500e-34
Identity = 110/311 (35.37%), Postives = 141/311 (45.34%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  R + ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A   GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G       +  S  +      +   K  RPLW+     +++  +P + S DF+P++ +SAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   14 ATLSIYKAARSIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PALPLVANLRCGLWYAPPRAFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGNRGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERHRLRAIHKGGEVNCEVSSTMLNGETKSNSF----------SSNWDSSVHLPVWVLGTEKNAIEGRIEEWTDQFESCGADIHSLAISLQKPLRPLWISQRTRIWLNEVPEIESWDFIPIILISASASDAVATQRMSSEFSWQYIPGAGDDEESWA-RGLTPTLFWK 298
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: PAN23734.1 (hypothetical protein PAHAL_D02583 [Panicum hallii])

HSP 1 Score: 157.1 bits (396), Expect = 1.500e-34
Identity = 110/311 (35.37%), Postives = 141/311 (45.34%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  R + ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A   GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G       +  S  +      +   K  RPLW+     +++  +P + S DF+P++ +SAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   14 ATLSIYKAARSIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PALPLVANLRCGLWYAPPRAFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGNRGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERHRLRAIHKGGEVNCEVSSTMLNGETKSNSF----------SSNWDSSVHLPVWVLGTEKNAIEGRIEEWTDQFESCGADIHSLAISLQKPLRPLWISQRTRIWLNEVPEIESWDFIPIILISASASDAVATQRMSSEFSWQYIPGAGDDEESWA-RGLTPTLFWK 298
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: PAN23733.1 (hypothetical protein PAHAL_D02583 [Panicum hallii] >PUZ60308.1 hypothetical protein GQ55_4G113200 [Panicum hallii var. hallii])

HSP 1 Score: 157.1 bits (396), Expect = 1.500e-34
Identity = 110/311 (35.37%), Postives = 141/311 (45.34%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  R + ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A   GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G       +  S  +      +   K  RPLW+     +++  +P + S DF+P++ +SAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   14 ATLSIYKAARSIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PALPLVANLRCGLWYAPPRAFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGNRGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERHRLRAIHKGGEVNCEVSSTMLNGETKSNSF----------SSNWDSSVHLPVWVLGTEKNAIEGRIEEWTDQFESCGADIHSLAISLQKPLRPLWISQRTRIWLNEVPEIESWDFIPIILISASASDAVATQRMSSEFSWQYIPGAGDDEESWA-RGLTPTLFWK 298
[Close]
BLAST of NO23G01330 vs. NCBI_GenBank
Match: PAN52540.1 (hypothetical protein PAHAL_J01738 [Panicum hallii])

HSP 1 Score: 157.1 bits (396), Expect = 1.500e-34
Identity = 110/311 (35.37%), Postives = 141/311 (45.34%), Query Frame = 0 
Query:   36 STLSLGKLTRRVSQQTRGVLGNHLQSIHFDAQFVQALLNAYSXXXXXXXXXXXXXXXXXXFANLRNGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAIIVDSTRGGKTFPDSLTYTLPIWAAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSERARVEALLPCF-YSTLKKALSG--TSLLSELRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYM--LPSLHSDDFVPLLCVSASRHREADEHR--EHFSWPYIQGAGDDHESWAPRGLTPFLFWK 340
            +TLS+ K  R + ++    L N L+S+  DA FV  +   +                    ANLR G WY PP  +   CYFKSTDGH+G WSFS++RLNLHLAL A   GG IIVDSTR GK FPDS++ T+PIW  V                                               S        LP +   T K A+ G       +  S  +      +   K  RPLW+     +++  +P + S DF+P++ +SAS        R    FSW YI GAGDD ESWA RGLTP LFWK
Sbjct:   14 ATLSIYKAARSIKRRA-STLYNALRSVAEDAAFVAEVAALW--------------PALPLVANLRCGLWYAPPRAFAATCYFKSTDGHAGNWSFSTARLNLHLALLAGNRGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERHRLRAIHKGGEVNCEVSSTMLNGETKSNSF----------SSNWDSSVHLPVWVLGTEKNAIEGRIEEWTDQFESCGADIHSLAISLQKPLRPLWISQRTRIWLSEVPEIESWDFIPIILISASASDAVATQRMSSEFSWQYIPGAGDDEESWA-RGLTPTLFWK 298
The following BLAST results are available for this feature:
BLAST of NO23G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_015643696.14.200e-3737.50PREDICTED: tRNA A64-2'-O-ribosylphosphate transfer... [more]
XP_004965603.24.000e-3536.01tRNA A64-2'-O-ribosylphosphate transferase isoform... [more]
XP_004965604.24.000e-3536.01tRNA A64-2'-O-ribosylphosphate transferase isoform... [more]
XP_008659676.25.200e-3535.37LOW QUALITY PROTEIN: tRNA A64-2'-O-ribosylphosphat... [more]
XP_015693743.11.200e-3436.33PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr... [more]
PAN23735.11.500e-3435.37hypothetical protein PAHAL_D02583 [Panicum hallii][more]
PAN23732.11.500e-3435.37hypothetical protein PAHAL_D02583 [Panicum hallii]... [more]
PAN23734.11.500e-3435.37hypothetical protein PAHAL_D02583 [Panicum hallii][more]
PAN23733.11.500e-3435.37hypothetical protein PAHAL_D02583 [Panicum hallii]... [more]
PAN52540.11.500e-3435.37hypothetical protein PAHAL_J01738 [Panicum hallii][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01330.1NO23G01330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|198434gene_8486Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01330.1NO23G01330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01330 ID=NO23G01330|Name=NO23G01330|organism=Nannochloropsis oceanica|type=gene|length=3133bp
ATGGGGACGAGCACCACCAGCCATGACCTCGCTACCAACGTACCCTCCTC
CACCTCCTCCTCCTTTTCCTCCTCCTCCTCCTCCCCTGCGTCCTCCTTCC
AACCCTCTACCCTGTCCCTCGGCAAGCTCACCCGTCGTGTCTCACAACAG
ACACGTGGCGTGCTGGGTAATCACCTCCAGAGCATCCACTTTGATGCGCA
Ggtgaggggagggctagaggaggggagggagggagggagagggagaggga
aggtggacaggtcttggtaaacggtagcatcaagtatttctatccatgtc
tgcacttgtcatattttccaacttgttgcactgattgtcccttctctcca
tccctccctcccttcaatcctcctttcgagcagTTCGTTCAAGCCCTCCT
CAACGCCTATAGCCAGACTCTCCCTCATCCCCTCCCTCCCTCCCTCCCTC
CTTCTCTTCCTCCCGTCTTTGCCAATCTACGCAACGGCGAGTGGTACCTT
CCTCCAGAAAAGTGGCATGGGAAGTGCTATTTCAAGgtaagggaggaagg
gaggaagggagggtgggagggaggggaaggcagcgtagggatagggaggt
gaaacgacgccttagaatttctctccctgtctccctctctccctccctac
ctccttatctccctacctacctacctacctcctaagAGCACTGACGGTCA
CTCGGGACAGTGGTCGTTCTCCTCCTCACGACTGAATCTTCACCTGGCTT
TGGCGGCCGCAAAGGGAGGGGGGGCAATTATAGTAGATTCGACCAGAGGA
GGGAAGgtaacccttcctccctcccttcctctcttactcccatcccgccc
ttcctttgtcactccatcccctcccataatcatgttctccctccctccct
ctctccctccctccctccctcccttagACCTTTCCCGACTCCCTTACTTA
CACACTTCCCATATGGGCCGCCGTgttgaaccaccttctgctcgagggag
gaacgaagggatgcggggagggagggagggaaaggggtcggaaagagcgg
ggaaaggaggaggaggaggaggaggaggaggagggagggaggggaagaaa
tagggcaggcggattgaaagACGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGGGGGGGAGCTAG
GGAGGGCGGGAGGGCGGGAGGGTGGGAGGGAGGGCCTCTTCCTCCCGCCG
TGGGTGCCCCCTTCGGAACGAGCGAGGGTGGAGGCTCTTCTGCCTTGCTT
CTACTCCACCCTTAAAAAAGCCCTCAGgtgaatatatggccttccctcca
tccctcctgcccttctgcactccctccctccctccctccctttttttctt
aacctctgccccgacaaatgtctcttctctcttatttccccccttccttt
cctctttccctccctccagTGGTACTTCCCTCCTCAGTGAGCTCCGATCT
CTCTTGTCGTGCAAACGTCAGAAACGGTTGAAACGGCTGAAATGGTTTCG
TCCCCTGTGGATGAAGAACGGTGACCCGCTCTgtaaggagggaggcggga
gggagggagggagggagggagggagagaagtgagttgaccttacagcaat
ctctccgtccctcccctcccttccctccctccctccctccctccttccct
tccttcctccagACATGCTCCCTTCCCTTCACTCTGACGATTTTGTCCCT
CTCTTGTGCGTTTCTGCTTCCCGTCATCGAGAAGCGGATGAGCACAGGGA
GCATTTCAGgcacgcattccttcttcccctccctccctccctccttccct
cccttcccatcaagccaacctcctcaaacccgtcattctgactcccctgt
cccccacacactcctaccacccatactcaccgatcctatctctcttcccc
tccctctctctttcctttaatctttccctcgatccctccctccctccatc
tttccccagCTGGCCCTACATTCAGGGGGCGGGAGACGACCATGAGAGCT
GGGCACCGCGCGGGCTGACTCCCTTCTTGTTCTGGAAGGCAGTGGAGAGG
GAGGGAGGGAGGGAGGGAGGGAGAAAGATCAGTGCGGAGGAGATGGAGAG
GAGGGTGCGGCAGGTTTTGAGGGAGCAGGAGGAGGGGAGGAAGGAGGGGG
AAGGAGAGGGGGAGGGAGGTAGGGAGGGCGGGGAGGAGGGGGAGGGAGAG
GGCAAGGGCGGGAAGGAGGGCGGGAAGGAGGGCGGGATATTGgtgagggt
gggagagacgggcctgtgggtggggagttggagaggggggtggagggagg
gagggagggaggggggaggaggtggggggtatggtgggcgtagtagagag
gggagggaggaaacgaacaaaaaagGGGGATAACGACGGTGAGAAAGGAA
AGGAGGAGGAGGAGGAGGAGGAGGATGGGAGGAAAGAGGAGGAGGAGGCA
AGGCGGCAACGGCAGGAGCTGTTGTTACAAAAGAGAATTGAAGAGACACT
CCTCCTTCCGCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CTCCCTGCATCTATGCACTTCTTGAGGTGGAGGGGGAAGGTGAAGGAGGA
AGGGGAGGGAGGGGGGAAAGGGAGGGAGGGAGGGAGGGCTGGCGAAGCAC
GGACTGCCCCTCGTGCTACAAACGTATCGATGCTACCGTCACGCCTTCTG
TCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTCC
TCCTCTGCCCAACCGGAAAGGCTCACAGCGTTGCCCTGGCCATAACTCTT
CTCCTGGCACACTTTGATTGCTCCTCTTCCTCCCTCCCCTTCCTCCCTTC
CTCCCTCCCTCTCTCCCTCGAGGGGTGTTGTGGGGAGGGAGGGAGGGAGG
GAGGAAAGGAGGAAGGGATGTCTCTGCCACGCCTACCTGACAAGGACACC
CTGCGTCGACCGCTATTTCTCCTCCAACGGCATCATCCGGAAGCGTTTCC
CTCCCGACGGCTCATGAAGGAAGTGTGGTTCTTTTTCAACCACAAAGAGG
GAGGAAAGGAGGGAGGGGGGAGGGGAGGGAGGG
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protein sequence of NO23G01330.1

>NO23G01330.1-protein ID=NO23G01330.1-protein|Name=NO23G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MGTSTTSHDLATNVPSSTSSSFSSSSSSPASSFQPSTLSLGKLTRRVSQQ
TRGVLGNHLQSIHFDAQFVQALLNAYSQTLPHPLPPSLPPSLPPVFANLR
NGEWYLPPEKWHGKCYFKSTDGHSGQWSFSSSRLNLHLALAAAKGGGAII
VDSTRGGKTFPDSLTYTLPIWAAVRGGGGGGGGGGGGGGGGGGGGGGGEL
GRAGGREGGREGLFLPPWVPPSERARVEALLPCFYSTLKKALSGTSLLSE
LRSLLSCKRQKRLKRLKWFRPLWMKNGDPLYMLPSLHSDDFVPLLCVSAS
RHREADEHREHFSWPYIQGAGDDHESWAPRGLTPFLFWKAVEREGGREGG
RKISAEEMERRVRQVLREQEEGRKEGEGEGEGGREGGEEGEGEGKGGKEG
GKEGGILGDNDGEKGKEEEEEEEDGRKEEEEARRQRQELLLQKRIEETLL
LPPSSSSSSSSSSSSSPCIYALLEVEGEGEGGRGGRGEREGGREGWRSTD
CPSCYKRIDATVTPSVLPPSLPPSLPPSLPFSSSAQPERLTALPWP*
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Synonyms
Publications