NO23G01210, NO23G01210 (gene) Nannochloropsis oceanica

Overview
NameNO23G01210
Unique NameNO23G01210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1856
Alignment locationchr23:443088..444943 -

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Properties
Property NameValue
DescriptionSOUL heme-binding family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:443088..444943 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011256Reg_factor_effector_dom
IPR006917SOUL_haem-bd
Homology
BLAST of NO23G01210 vs. NCBI_GenBank
Match: XP_002180141.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48332.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 119.8 bits (299), Expect = 1.100e-23
Identity = 87/219 (39.73%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    1 MGNSLNPLKSPEPVYNVICTR-PIGYEVRVYMPYFVAEVDNSAADNSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVV--------MPQAPXXXXXXXXXXXXXXXXSGKTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETLLPKECEEVD-WMYCGYDPPFTPGPFRRNEVWVDLKMSEED 210
            MG         EP + V+  +    YE+R Y   F A     A  +S  F  LA YIGVF  P N Q  T     ISMTAPVV         P+  XXXXXXXXXXXXX   +G  M+FI+P++Y ++  +P+PT+PRVH++E+P     V RYSG   + ++  K + L ++L+++ +   E   V+ + + GY+PPFT   FRRNEVW++L  ++ D
Sbjct:    1 MGTIFGKQTVAEPAFEVLYRQTQQAYEIRRYATRFAASTSTDANSDSAPFNALARYIGVFGTPEN-QGRT----AISMTAPVVKEESSGSSQPEXXXXXXXXXXXXXXXNGEAGMVMKFILPAAYDSMEKIPQPTNPRVHIEEIPPAVGAVHRYSGSFDDTVSRNKARWLAQQLREDGVDITEDYAVEHYQFWGYNPPFTLPMFRRNEVWIELDATQVD 214          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: XP_002180145.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48336.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 119.8 bits (299), Expect = 1.100e-23
Identity = 87/219 (39.73%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    1 MGNSLNPLKSPEPVYNVICTR-PIGYEVRVYMPYFVAEVDNSAADNSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVV--------MPQAPXXXXXXXXXXXXXXXXSGKTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETLLPKECEEVD-WMYCGYDPPFTPGPFRRNEVWVDLKMSEED 210
            MG         EP + V+  +    YE+R Y   F A     A  +S  F  LA YIGVF  P N Q  T     ISMTAPVV         P+  XXXXXXXXXXXXX   +G  M+FI+P++Y ++  +P+PT+PRVH++E+P     V RYSG   + ++  K + L ++L+++ +   E   V+ + + GY+PPFT   FRRNEVW++L  ++ D
Sbjct:    1 MGTIFGKQTVAEPAFEVLYRQTQQAYEIRRYATRFAASTSTDANSDSAPFNALARYIGVFGTPEN-QGRT----AISMTAPVVKEESSGSSQPEXXXXXXXXXXXXXXXNGEAGMVMKFILPAAYDSMEKIPQPTNPRVHIEEIPPAVGAVHRYSGSFDDAVSRNKARWLAQQLREDGVDITEDYAVEHYQFWGYNPPFTLPMFRRNEVWIELDATQVD 214          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: PIA65215.1 (hypothetical protein AQUCO_00100594v1 [Aquilegia coerulea])

HSP 1 Score: 109.4 bits (272), Expect = 1.500e-20
Identity = 85/198 (42.93%), Postives = 117/198 (59.09%), Query Frame = 0
Query:   25 YEVRVYMPYFVAEV-----DNSAADNSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVV--MPQAPXXXXXXXXXXXXXXXXSGK------TMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETLLPKECEEVDWMYCGYDPPFTPGPFRRNEVWVDLKMSEED 210
            YE+R Y P  VA++          D    F  LASYIGV  +P NT     KP+ I+MT PV+       XXXXXXXXXXXXXXXX+G+      TMQF++PS YT     PKP D RV +KE  GKT GV+R+SG AT+ +  +K++ LK+ L+++          D++   Y+PP+T  PFR NE+ + L++ E +
Sbjct:   24 YEIRKYSPSVVAQITYDPSQMKGGDKDGGFMVLASYIGVIGQPQNT-----KPEKIAMTTPVITSXXXXXXXXXXXXXXXXXXXXXTGEAEKKLVTMQFVLPSKYTKAEEAPKPVDERVVIKEEDGKTYGVMRFSGNATDSVVAQKVEKLKKSLERDGYKIIG----DFLLARYNPPWTLPPFRTNEIMIPLELVENN 212          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: OEU19873.1 (SOUL heme-binding protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 108.2 bits (269), Expect = 3.300e-20
Identity = 82/210 (39.05%), Postives = 117/210 (55.71%), Query Frame = 0
Query:   12 EPVYNVICTR---PIGYEVRVYMPYFVAEVDNSAADNSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVVMPQAPXXXXXXXXXXXXXXXXS---GKTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETL--LPKECEEVDWMYCGYDPPFTPGPFRRNEVWVDLKMSEEDVKAK 214
            EP +  +  R      Y+VR Y   F AE+D      S+ F+ LA YIGVF  P N     GK + ++MTAPV M +   XXXXXXXXXXXXX  S   GK M+F +PS Y  L  +PKPT+P + + E+P     V RYSG   + +  +K   L  +L+ + +  + +E    ++ + G++ PFT   +RRNE+W+DL   E D+  K
Sbjct:   12 EPQFKTVLERTSVATTYQVREYGKRFAAEIDYGTGGTSSPFQGLARYIGVFGSPQN----EGK-EAMAMTAPVSMERKGTXXXXXXXXXXXXXNQSEGGGKKMKFFLPSEYDELEKIPKPTNPNIKIVEIPPSVGAVHRYSGSLDDQLKDQKALELSLQLRDDGIDRMTEEHVLQNYQFWGFNAPFTIPMYRRNEIWLDLTKEEVDILQK 216          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: XP_021691112.1 (uncharacterized protein LOC110672605 [Hevea brasiliensis])

HSP 1 Score: 104.0 bits (258), Expect = 6.100e-19
Identity = 85/210 (40.48%), Postives = 117/210 (55.71%), Query Frame = 0
Query:    1 MGNSLNPLKSPEPVYNVICTRPIGYEVRVYMPYFVAEVDNSAA----DNSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVVMPQAPXXXXXXXXXXXXXXXXSGK--TMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETLLPKECEEVDWMYCGYDPPFTPGPFRRNEVWVDLK 205
            MG  L  +    P Y VI +    YE+R Y P  +AE     +    D    F  LA+YIG    P NT     KP+ I+MTAPV+     XXXXXXXXXXXXXXXX  K  TMQF++P+ Y      PKPTD RV ++E   K  GV+++ G AT+ +  EK++ LK+ L+++          D++   Y+PP+T  PFR NEV + ++
Sbjct:    1 MGMVLGRITVETPEYEVIQSTS-EYEIRKYAPLVLAEFTYDPSLFKGDKDGGFMVLANYIGAVGNPQNT-----KPEKIAMTAPVITKSGXXXXXXXXXXXXXXXXXGEKMVTMQFLLPAKYKKAEEAPKPTDERVVIREEREKKYGVVKFGGVATDKVVEEKVEKLKKSLERDGAKVNG----DFVLARYNPPWTLPPFRTNEVMIPIE 200          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: EWM22925.1 (Regulatory factor, effector, bacterial [Nannochloropsis gaditana])

HSP 1 Score: 103.2 bits (256), Expect = 1.000e-18
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 0
Query:  108 MQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETLLPKECE-EVDW 181
            MQFIMP+SY++LSSLP PTD  V LKEV GKTVGV+RYSGKATNVMT EKLQ L+E L++++ LPKE E E++W
Sbjct:    1 MQFIMPASYSSLSSLPAPTDASVRLKEVAGKTVGVLRYSGKATNVMTREKLQRLEEMLRKDSFLPKEGEGELEW 74          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: XP_005706202.1 (SOUL heme-binding protein [Galdieria sulphuraria] >EME29682.1 SOUL heme-binding protein [Galdieria sulphuraria])

HSP 1 Score: 102.8 bits (255), Expect = 1.400e-18
Identity = 74/214 (34.58%), Postives = 104/214 (48.60%), Query Frame = 0
Query:    1 MGNSLNPLKSPEPVYNVICTRPIGYEVRVYMPYFVAEVDNSAAD--------NSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVVMPQAPXXXXXXXXXXXXXXXXSGKTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKAT-NVMTHEKLQLLKERLQQE--TLLPKECEEVDWMYCGYDPPFTPGPFRRNEVWVDL 204
            MG+ +  +   +P+Y  I  +   YE+R Y    VAEV  S            S AFR LASYIGVF +P N  +S  + + ISMTAPV+                     SG +M FI+P  Y+     P+P D RVHL+ VP + V V+ + G      +  E+ +   E+L+++   LL  E     W    Y+PPFTP P RRNE+ V +
Sbjct:  211 MGSVVGKVSVEQPLYE-IEKKTSEYEIRKYPSLRVAEVYRSELKGETSNYDFESQAFRILASYIGVFGEPKNKDNSNQQVK-ISMTAPVL----------SKPIEALETRSSGNSMAFILPKEYSEQKEPPEPVDSRVHLRVVPPRKVAVVTFRGTVNRETLEAERAERFMEQLKKDGYRLLSSE-----WELARYNPPFTPPPLRRNEILVQV 407          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: GAQ79699.1 (hypothetical protein KFL_000360150 [Klebsormidium nitens])

HSP 1 Score: 102.8 bits (255), Expect = 1.400e-18
Identity = 89/222 (40.09%), Postives = 122/222 (54.95%), Query Frame = 0
Query:    1 MGNSLNPLKSPEPVYNVICTRPIGYEVRVYMPYFVAEVDNSAA----DNSNAFRTLASYIGVFSKPANTQSSTGKPQG---ISMTAPVVMPQAPXXXXXXXXXXXXXXXXSG-----------KTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETLLPKECEEVDWMYCGYDPPFTPGPFRRNEVWVDLK 205
            MG  L  +   +P Y V+ +    YEVR Y P  VAEV    A    + S+ FRTLA YIGVF  P N   S  KP+    I+MTAPV+   +  XXXXXXXXXXXXXXX               MQF++P  Y T+ + PKP D RV +KE+P + +GVI++SG  T  +T +K + L+E L++  L       +      Y+PPF P   + NEV++ ++
Sbjct:    1 MGLVLGRVTVEQPKYTVV-SSGANYEVREYPPAVVAEVKYEGAAYGKNQSDPFRTLAKYIGVFGNPEN--ESKSKPESGEKIAMTAPVITETSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXESIMQFVLPEKY-TMENAPKPKDSRVSIKELPARKLGVIKFSGNTTEELTAQKEKALREALEEAGLTVTGTPTL----ARYNPPFVPWFLKTNEVFLPVE 214          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: XP_002289954.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93491.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 102.4 bits (254), Expect = 1.800e-18
Identity = 76/230 (33.04%), Postives = 117/230 (50.87%), Query Frame = 0
Query:    1 MGNSLNPLKSPEPVYNVICTRPI-----GYEVRVYMPYFV--AEVDNSAADNSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVVMPQAPXXXXXXXXXXXXXXXXSGKTMQFIMPSSYTTLSSLPKPTD-PRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQLLKERLQQETL-LPK------ECEEVDWMYCGYDPPFTPGPFRRNEVWVDLKMSEEDVKAKLA 216
            MG  L  +   EP ++V+  R +      YE+R Y   +   AE D+S++   + F TLA YIGV   P N  +     + I+MTAPV M Q                  + K M+FI+PS Y  +S +PKP +  +V +KE+      V +++G  T+   HEK++ L  +L  + + LPK        ++V + + G++PPFT    RRNEVW++L  SEE V   +A
Sbjct:    1 MGMVLGKITVEEPAFSVLFKRSLSSPQTSYEIRRYGQRYAIEAEYDSSSSTTRSPFMTLAGYIGVTKAPENEAN-----EAIAMTAPVAMEQT--------------TEKNKKLMRFILPSKYDEMSKIPKPNNADKVIIKEIAPAVGAVHQFNGSFTDSHCHEKIRALALQLSIDGVDLPKGEDGAVVLDKVKYEWWGFNPPFTLPFLRRNEVWIEL--SEEQVDKLVA 209          
BLAST of NO23G01210 vs. NCBI_GenBank
Match: CBN74963.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 102.1 bits (253), Expect = 2.300e-18
Identity = 91/225 (40.44%), Postives = 118/225 (52.44%), Query Frame = 0
Query:    1 MGNSLNPLKSPEPVYNVICTRPIGYEVRVYMPYFVAEVDNSA-ADNSNAFRTLASYIGVFSKPANTQSSTGKPQGISMTAPVVM---PQAPXXXXXXXXXXXXXXXXSGKTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKATNVMTHEKLQ-----LLKERLQQETLLPKECEEVD--WMYCGYDPPFTPGPFRRNEVWVDLKMSEEDVKAKL 215
            MG  +    +P P Y+V+      YE+R Y  Y VAEV+NS      + FRTLA YIGVF  PAN  +     + I+MTAPVV        XXXXXXXXXXXXXXXX     QFIMP  +  +S LP PTD RV L+EVP     V ++SG       H+ +      +  E++  E     E    D  ++   YDPP+T    R NE+W  + +S  +  AKL
Sbjct:    1 MGGVVGKGSTPVPEYDVL-GHGASYELRAYDGYVVAEVENSGEGSEDDRFRTLAKYIGVFGNPANKVAGGDAGENIAMTAPVVTGDPTXXXXXXXXXXXXXXXXXXXXXXXXQFIMPKQFKRISDLPTPTDSRVSLREVPEAVYLVHQFSGNMGRGDGHDAIAERERIVAVEKVASEGGAFSEYVSADSKFLVARYDPPWTLPFLRTNELWFPVPLSPTEATAKL 224          
The following BLAST results are available for this feature:
BLAST of NO23G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002180141.11.100e-2339.73predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002180145.11.100e-2339.73predicted protein [Phaeodactylum tricornutum CCAP ... [more]
PIA65215.11.500e-2042.93hypothetical protein AQUCO_00100594v1 [Aquilegia c... [more]
OEU19873.13.300e-2039.05SOUL heme-binding protein [Fragilariopsis cylindru... [more]
XP_021691112.16.100e-1940.48uncharacterized protein LOC110672605 [Hevea brasil... [more]
EWM22925.11.000e-1870.27Regulatory factor, effector, bacterial [Nannochlor... [more]
XP_005706202.11.400e-1834.58SOUL heme-binding protein [Galdieria sulphuraria] ... [more]
GAQ79699.11.400e-1840.09hypothetical protein KFL_000360150 [Klebsormidium ... [more]
XP_002289954.11.800e-1833.04predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBN74963.12.300e-1840.44conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01210.1NO23G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602182gene_8475Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_103945g1gene7524Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01210.1NO23G01210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01210 ID=NO23G01210|Name=NO23G01210|organism=Nannochloropsis oceanica|type=gene|length=1856bp
ACAGTGAAAACCATGGGGAACTCTCTTAACCCACTCAAGTCGCCGGAGCC
CGTCTATAACGTTATTTGCACGCGTCCTATTGGgtgcgtctcagtcggaa
catcgaggaggcggggaggggggtcgtgagggagggaggggggaagggct
ttactgcagggtaaagggtgaagaatatgcatgaccttgcatcaggaatg
gaaacgactctggcgggagatgtagtcatgattgtgattgtcatcttcaa
ttctccccccaccacacccaccttattgacctcctcctccctgtcccccc
ttccctccctcccccccgtcctagCTACGAAGTACGTGTGTACATGCCCT
ACTTCGTCGCGGAGGTGGATAATTCCGCTGCTGATAATTCCAACGCTTTC
CGGACGCTGGCTAGCTACATTGGGgtaaggagggagggagggagggatgg
atggatggagggagggagggagggagggagggagggagggagagagggag
ggaggggtggagggagggagggcaggggtggagggaaagacgacaggggt
ggagggaaagaggaaggaagtgaagctttggacgaccgcctattaaccct
gcctccctccctctctcaacctccctccctcttcctccacagGTCTTCAG
CAAACCTGCCAACACCCAAAGCAGCACTGGCAAACCCCAAGGGATCAGCA
TGACTGCACCTGTTGTGATGCCTCAGGCACCTTCATCCTCCTCTCCGGAG
GCCATCTCCATGACGACCCCGGTGGTGCAGAGCGgtaagccctcccaccc
ttcctccctcccttcctccctccccttcaccatccccattctcagcgcgc
caaggccgccattagtccctctatatttaccccgtactcccctcccctcc
aatcactccctccctccctccctccctccctccctccctcccccccccgc
agGCAAAACTATGCAGTTCATCATGCCCTCGTCCTACACCACCTTGTCCT
CGCTTCCAAAACCCACTGACCCCCGCGTTCACCTGAAAGAGGTCCCTGGG
AAAACTGTGGGCGTTATCCGCTACAGgtgcgcccctccctccctccctcc
ctccctcccttccttccatccttccttcctttctcaccatcgtgtcgatt
tcgccatacccgtcattctgaccgacgcccgtatccctcacccgcttctt
aatgccctccttccctcctcatctcatgcccagctcaccaagcccgtcat
ttctgactgacatcgatgccttccatagaatacacatatacaactcaaat
gtactcctgactcacatccctcccttcctccctccctcagCGGCAAGGCC
ACCAACGTAATGACGCACGAGAAGCTCCAGTTGCTCAAGGAAAGACTGCA
GCAAGAGACACTGCTGCCGAAAGAGTGTGAAGAGGTGGACTGgtgaggga
gggagggagtgtgggaacggagagttggaggggagaaggagagtgctcat
taccgccttttcacgtatgcttctgtctcatcttcccctccctccctccc
tccctccctccctccctcccttttttcctcgcagGATGTACTGTGGCTAC
GATCCTCCCTTCACGCCGGGCCCATTCCGCAGGgtagggagggagggagg
gagggagggagggagggacactggcagtatgcacattgcatgtacattta
aatgcatgctcatgtgtttaccttaatccccccttcctccttccctcact
ccctcctcagAACGAGGTGTGGGTTGACTTGAAGATGAGCGAGGAAGACG
TCAAGGCCAAGCTGGCCGCAGTGGATGGCAAGTAGGGAGGGAGGGAGGGA
GGGAGG
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protein sequence of NO23G01210.1

>NO23G01210.1-protein ID=NO23G01210.1-protein|Name=NO23G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MGNSLNPLKSPEPVYNVICTRPIGYEVRVYMPYFVAEVDNSAADNSNAFR
TLASYIGVFSKPANTQSSTGKPQGISMTAPVVMPQAPSSSSPEAISMTTP
VVQSGKTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKAT
NVMTHEKLQLLKERLQQETLLPKECEEVDWMYCGYDPPFTPGPFRRNEVW
VDLKMSEEDVKAKLAAVDGK*
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Synonyms
Publications