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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr23 | genome | chr23:429478..433796 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Homology
BLAST of NO23G01170 vs. NCBI_GenBank
Match: CBJ25503.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 116.7 bits (291), Expect = 3.200e-22 Identity = 77/199 (38.69%), Postives = 111/199 (55.78%), Query Frame = 0
Query: 83 VAVAGQCQFSCVADQLWR-KECREGWRADILLRKLALYVIATNEDDFRSFMLHAQPRTRRQNSTAGESVSIASYLQKMSHNSTDGDHLTLQALCDFFQCPIHVLSLV-PSPFAERTLQHLIKTTIVLSSLFPRPLPSLPSLPPSLLATATDSIPPPFLPAL----AKLRVPKRELWLTLRGEAHFRSLRPSLPPSLLEA 276
V+ +G CQFS VADQL+R + E +R D+ LR LAL+ ++ N++ F+ FMLHA P TRRQ G V + Y ++M+ + DGDH+TLQALCD + I+V+ + RT+ +S P + P P + A D++ P + +L L++ R LWL+L GEAHFRSLR P + EA
Sbjct: 102 VSRSGACQFSAVADQLFRSRPVTESFRPDVYLRLLALHCVSHNQNAFQDFMLHAAPVTRRQRQRGGGGVDMEEYARRMTSSRCDGDHITLQALCDALKVNINVVKWTRDDGWYPRTVASATTNDAASASNPPAAVAEEPRRPSRSVFVA-DTLRPRAVASLDARARDLQLQGRTLWLSLHGEAHFRSLRVRDPVTEAEA 299
BLAST of NO23G01170 vs. NCBI_GenBank
Match: EWM22926.1 (hypothetical protein Naga_101300g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 77.4 bits (189), Expect = 2.100e-10 Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 0
Query: 552 LSTAISTDLLSLSHGWPAVEIDKIKEDVLKNISTLPREEQRVLLDKGLLSVVRRFLEGGKEKELGGAGAGGMAKGPSSRPHPCSLSGGVGDEXXXXXXXXXXXXXXXXSIIPACRPSLPPHLVLLFLKMLLVLPVEKHHLVDSGLPRVILSVMTREGGR 711
L++A+S DL+SL++GWPA ++K K ++ +N+++ P QR LLD+GLL +VR FLEG P SR XXXXXXXXX P RP P HL+ LFLK+LL+LP++ L S LP+ +L VM GGR
Sbjct: 181 LASAVSDDLVSLANGWPATALEKRKFEI-QNVASFPVRRQRQLLDEGLLVIVRNFLEGPL---------------PPSRXXXXXXXXXXXXXXXXXXXXXXIFP-------PPLRP--PLHLINLFLKLLLILPIQHRDLTASELPQAVLRVMMEGGGR 314
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01170 ID=NO23G01170|Name=NO23G01170|organism=Nannochloropsis oceanica|type=gene|length=4319bp
ATGGTTGTCCCGCCTGCACCAGCCATTACCTTCCCAAGCGACCTCCTCTC
TCCGGCCTTCGAAGAGTCTCTTTTGCGGGAAGACTCTTCCGATTTCATCA
CACGACAAAGAATAGAAGCTGCACAGGGGAATGATGCACTCAGACATTAT
TTTGAAGCGGGGTTTGTGCATGGgtaagtgtaatcccgcgctccctccct
ccttccctccctccctccttccctcccattcctttccccttcaatttctt
gttatgcatcaatcttctgggtgtgaatagccgttgaacgatattaccaa
tgtgggtctcagtcgaattgtttatgaggcttgtttaatttattttaatt
tattcacagGAGCAAAGGCGATAAACCCGTTCAGGATTTTTTTTCAAACC
TAGGGCTCGAGGAAAAAGAAACGCTGAACGGAGTAGCAGTTGCGGGCCAG
TGTCAGTTTTCCTGTGTCGCAGATCAGCTATGGAGGAAGGAGTGTAGAGA
GGGGTGGCGAGCTGACATTCTGTTACGGAAGCTTGCTTTATATGTGATAG
CTACTAACGAGgtgagctttaatatatattggaaaatactctcatgcatt
atttatttgaattgtgacattgaaatccatttttttgtgtctgagtagtt
cttgattggtgtttaaatttgcatctgtatatatgtgactattatttcat
ttattattttatttttcaaacaagatttacgttatttatattattttgta
ttcaattatgtaattgatagttgtaaatttgttcatgtatgtgtgtatgc
atttgttcatttatcgatttataactttatttattcattgatgacgtatt
cattaatcccctcttatttcctccactcaaataaatcactcaatcaatca
acccccgcactcagGACGATTTCCGCTCCTTCATGCTACACGCCCAGCCC
CGGACCCGCCGTCAGAACAGCACCGCCGGAGAGTCCGTCTCCATCGCTTC
CTACCTTCAAAAGATGAGCCATAACTCCACCGATGGCGACCACTTGACAC
TCCAAGCGCTTTGCGATTTCTTCCAGTGCCCGATTCATGTTCTTTCCCTC
GTCCCCTCCCCCTTCGCGGAACGCACACTCCAACACCTTATCAAAACGAC
CATCGTCCTCTCTTCCCTTTTCCCCCGACCTCTCCCTTCCCTCCCTTCCC
TCCCTCCTTCCCTCCTTGCCACTGCCACGGATTCTATCCCCCCTCCCTTC
CTCCCTGCTCTCGCGAAGTTAAGAGTGCCAAAGCGGGAGTTGTGGTTGAC
CCTGAGGGGGGAGGCACACTTCCGCTCCCTCCGTCCCTCCCTCCCTCCCT
CCTTGCTGGAAGCTAATTACGCAGAAGCGGCCTTGGTAGCCTTGAGGGAG
GGAGGGAGGGAGGGACGGAGGGACGGAGGGAGGAAGGGAGGGGAGGTGAT
TGTGATTGAGGATGATGAGGAGGTGGAAGACAAGGAAGGAAAGGAAGGAG
GGAACGAGGGGAGAAGTGTGACAGAGgtatgttctatctgtttaaatgat
attgacgaggaggggaaagcggaggaagggaaagaagagtgcgggaatga
ggatgaggcaacgatgaagagggggggaaaggaagggcaggaaaacgaag
gggggaggaagggctggacgctccttcccacgaagaagagaggaaaagta
agagggatgaaaggcgtcgtccctcctcctcctcctcctcctccactttc
cgcaatcaaccaagggcgggcaggaaggaggacgaggacgaggacaatgg
ggagggggaggaagggacgcgagcgcagccggatggttgttgccactcct
tccacttttcgtgtctgtggcgatggagcgagctctgtaacacatgccct
aattgtaaaggagtgtaccaagggctgagggtgggaggaagggaagggag
ggtggtggcgttgccaggagggagggggggggaaagaagaggaggagggc
ggggaggagctataattatttggttggcgaggaagagaggagggtgggga
cggatgattgggaagaggaaggggaggaggaaggggtcatgtgccacgag
tgtggaaggggggatgatgacgagttgttgttgttgtgtgatggggaggg
aggggggagggagggatggtgtgggagggcgtcgcacacgtactgtgtcg
gactagggagggctgtgcctgaaggaaattggttttgtcggaggtgtgag
agaggcagggaggcagggagggtgggaggggagaggaggaggctgttaag
gtcccgaaggagagaggaagaggtggaggaggaggagggggtgggggcgg
agggggaggagagagagggagggagggagggaggggcaaggaggaggagg
gtacgccggcctcgaagtgacagcagcagcagcagcggcagtgaccatac
caggacgagtagGAGGAGGGTGAGGGGGAGGAGGAGAGGGGGGGGAGGAA
TAGGCTGGCTGTTGCGCTGCAGCAGAGGGTGGGAGGGCCTGCAGTGCTTC
CTTCGACCGAATCGTGGAGCCGTGTCTTGAGAGCGGCGGCAGAGGCGGAG
GAGGGATTGAGGGAAGGCGGGAGGGAGGGAGGGGGgtaaggagggaggag
gaagaagccgaggaggaggagggagggaggaaggaagtgagggaggagga
ggaggaggtgaagagggcgtttgagtggaaggaaaaggcgcttgcgagag
ttgtagagagaggaggaagaggagaaaggggggaggatgggagggaggaa
ggggaggaggagggagtggtcgacgcaagcgaagGTCCTATGAAATTCCT
TCCTCTTCCTCGGAAGAGGAGGAAGGAAGAAGAGGGGGAGGACGCCCTTC
CTCTCTTCCTTCCTCCCTCCCTTCCTTGGTACCTCTATCCCGGCCGACTT
TTGCTGCCACTGCTGCCACTGCTGCTACAGCTTTGACGGGCGGTTTGAAT
CGAAGGCCTCGTTTGCAGAACGGCAAGAGTAGCAATGGAGGAGGCGGAGA
AGGAGGAGGCGGAGGGGGAAGAGGAGGAGAAGGAGGAGGAGGAGGAGGGG
GAAGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGGGAGAGTCGAC
CTTCTTTTCCACCTCCCCCCGCTTTTCGTCTTGCTCCTGGCTCGACAGAT
GCTCCGCATCTCGCAGCCCCTCCCCCTCCCTTACATTCTCCCCTTCCTCC
TTTCAGCCCTCCCTCCTCCTCACTCGTCTCTCCACCGCCATCTCCACCGA
CCTCTTATCCCTTTCCCATGGCTGGCCTGCGGTCGAAATAGACAAAATAA
AAGAGGACGTACTCAAGAACATAAGCACCCTCCCGAGAGAGGAGCAGCGC
GTGTTGCTCGACAAGGGCCTGCTGTCGGTGGTGAGGAGATTCCTGGAGGG
AGGGAAGGAGAAAGAGTTGGGAGGGGCAGGGGCAGGGGGGATGGCAAAGG
GCCCCTCCTCTCGTCCCCATCCTTGTTCGCTCTCCGGTGGTGTTGGCGAT
GAAGGAGGAGGGCGAGGAGAAGGACGAGGAGACGGCATGGCTTCCTCCTT
TTCCATCATACCTGCCTGTCGTCCCTCCCTCCCTCCTCACCTCGTCCTTC
TCTTTTTGAAAATGCTGCTGGTCCTGCCGGTCGAGAAACATCACTTGGTT
GACTCGGGCCTCCCTCGGGTGATTCTCTCCGTGATGACGAGGGAGGGTGG
GAGGGAGGGCGAGAGGGAGGAAGGTCGACGGGTGGCTCAGAGGTTGATTG
AGGGATGGGGACGTTTTGTGGTGGGAGGAGTGAGAGAGGGAGGGAGGGAG
GTAGGGTTGAATGGACGGGGGGTGGGCCTGGCCTCGTGTTCGTTGCCGGT
GTTTCGACGTAGTGGATAAGGAGGGAAGCAGGGAGGGAAGCAGGGAGGGG
AGGAGGGGGAGGAAGTGGAGATTTTGATACGTCGTGGCACAAAGCGAGGG
GAAAGGAAAATACTGACTAAATTGAGTGAGTCTAGAGAAGCCTGAAGTGA
GGGTTGAGGAGAGAGAGATTTTCGAATGAATATAAAAGGACTGCTTGCGC
CAGTCACAAAATAAAATCAGATGATGAAATAAATGTTAGAGAAAGGAAGA
AGAGAGAAGCAAAATTCATGTGATGATGAATTTCTCAATAACCGATAACA
ACAAAAGCATAAGTAATTACATGGCAATAGAAAACGAAGAAGAAATAAGT
AAGAAGAAATCGAAGATGC back to topprotein sequence of NO23G01170.1 >NO23G01170.1-protein ID=NO23G01170.1-protein|Name=NO23G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=765bp
MVVPPAPAITFPSDLLSPAFEESLLREDSSDFITRQRIEAAQGNDALRHY
FEAGFVHGSKGDKPVQDFFSNLGLEEKETLNGVAVAGQCQFSCVADQLWR
KECREGWRADILLRKLALYVIATNEDDFRSFMLHAQPRTRRQNSTAGESV
SIASYLQKMSHNSTDGDHLTLQALCDFFQCPIHVLSLVPSPFAERTLQHL
IKTTIVLSSLFPRPLPSLPSLPPSLLATATDSIPPPFLPALAKLRVPKRE
LWLTLRGEAHFRSLRPSLPPSLLEANYAEAALVALREGGREGRRDGGRKG
GEVIVIEDDEEVEDKEGKEGGNEGRSVTEEEGEGEEERGGRNRLAVALQQ
RVGGPAVLPSTESWSRVLRAAAEAEEGLREGGREGGGSYEIPSSSSEEEE
GRRGGGRPSSLPSSLPSLVPLSRPTFAATAATAATALTGGLNRRPRLQNG
KSSNGGGGEGGGGGGRGGEGGGGGGGRGGGGGGGGGGGGGGGGGRGGGGG
GGGGRGESTFFSTSPRFSSCSWLDRCSASRSPSPSLTFSPSSFQPSLLLT
RLSTAISTDLLSLSHGWPAVEIDKIKEDVLKNISTLPREEQRVLLDKGLL
SVVRRFLEGGKEKELGGAGAGGMAKGPSSRPHPCSLSGGVGDEGGGRGEG
RGDGMASSFSIIPACRPSLPPHLVLLFLKMLLVLPVEKHHLVDSGLPRVI
LSVMTREGGREGEREEGRRVAQRLIEGWGRFVVGGVREGGREVGLNGRGV
GLASCSLPVFRRSG* back to top
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