NO23G01140, NO23G01140 (gene) Nannochloropsis oceanica

Overview
NameNO23G01140
Unique NameNO23G01140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5002
Alignment locationchr23:415840..420841 -

Link to JBrowse

Properties
Property NameValue
DescriptionLong-chain-fatty-acid--AMP ligase FadD28
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:415840..420841 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0008610lipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0031177phosphopantetheine binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
Homology
BLAST of NO23G01140 vs. NCBI_GenBank
Match: XP_009845094.1 (hypothetical protein H257_17844 [Aphanomyces astaci] >ETV65417.1 hypothetical protein H257_17844 [Aphanomyces astaci])

HSP 1 Score: 475.7 bits (1223), Expect = 3.300e-130
Identity = 281/669 (42.00%), Postives = 369/669 (55.16%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGL-----XXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPS--------------FDLSSLR----GREGGEGG----------------GVIFPTYGLAEHTVFVCGGGRQ--RLWVEKESLEGGGEEEGEGPSTAAVVPTPPHAPGSRELVGCGVPREDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSLPPALHIWE 649
            +L RL HW  VQP K    FVDD G+  DS+TY +  +R+  +A  +L  PS  ++   L      KGD V+LV+ P LDF VAFLACL AG+V VPV+PPDPR+L KD+ MFT++ +++GAK+ALT++ YN+ KK   I      +++        WP +L WV  +GL                         FLQYTSGSTSEPKGV ISHGNL HNL +I+  LE   D++ VSWLPQYHDMGLIG+YLG+L+ GG G Y SP SFI+ PL+W+ L+SQY+ATH QAPNFAYAL A+K+ T  NP  +               DLSS+R    G E  +G                 GV+ PTYGLAEHTV+VC    Q  ++ V+KE+LE                P    A  ++E+VGCG PR DV + IV P   + L  G VGEIW+ SPS  +GY+     T+ MFHA +         NE             P+ Y+RTGDLG LY  ELFVCGRLKDL+IVRG+N+YPQDIEK  EG     +RPGCSAAFS+ ++ +                                        LA  +   ++   GVS++ L  +  HSIPKTTSGK++R  ++ AF+ ++L     I++
Sbjct:    8 VLGRLDHWATVQPKKNLFAFVDDNGQVTDSVTYDDVQSRSSNLAKWMLTSPSVSSKGLGL-----SKGDIVLLVYPPGLDFIVAFLACLRAGVVAVPVYPPDPRKLRKDIAMFTTVCSNAGAKVALTNSTYNYAKKVVAI------QQKVTFSEKFPWP-DLRWVESDGLVLTSPPPSPSSTPWLLVPPSLDDLAFLQYTSGSTSEPKGVMISHGNLGHNLSMIASALEATDDSVVVSWLPQYHDMGLIGAYLGVLFTGGHGVYMSPFSFIKNPLVWIRLISQYRATHLQAPNFAYALCARKFAT-ANPSQTSTSITTSNTTSSCKLDLSSVRHMINGAEPIDGDAIDAFYRAFEPYGLCRGVVRPTYGLAEHTVYVCDSSPQLLQVQVDKEALE----------HHDVFQPVADKARATKEMVGCGAPRSDVDVRIVHPDTHKELAAGSVGEIWIRSPSTTQGYFGLNDLTREMFHATIV-------SNE-------------PQHYMRTGDLGVLYQGELFVCGRLKDLIIVRGRNHYPQDIEKTVEGFPD--IRPGCSAAFSISTNGI------------------HEGLGVVAEVRDANVPRAALEALAASVRQAVSVEHGVSVTALALVSTHSIPKTTSGKISRKRSKEAFVGQTLTELYRIFK 613          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: XP_009845095.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV65418.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 475.7 bits (1223), Expect = 3.300e-130
Identity = 281/669 (42.00%), Postives = 369/669 (55.16%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGL-----XXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPS--------------FDLSSLR----GREGGEGG----------------GVIFPTYGLAEHTVFVCGGGRQ--RLWVEKESLEGGGEEEGEGPSTAAVVPTPPHAPGSRELVGCGVPREDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSLPPALHIWE 649
            +L RL HW  VQP K    FVDD G+  DS+TY +  +R+  +A  +L  PS  ++   L      KGD V+LV+ P LDF VAFLACL AG+V VPV+PPDPR+L KD+ MFT++ +++GAK+ALT++ YN+ KK   I      +++        WP +L WV  +GL                         FLQYTSGSTSEPKGV ISHGNL HNL +I+  LE   D++ VSWLPQYHDMGLIG+YLG+L+ GG G Y SP SFI+ PL+W+ L+SQY+ATH QAPNFAYAL A+K+ T  NP  +               DLSS+R    G E  +G                 GV+ PTYGLAEHTV+VC    Q  ++ V+KE+LE                P    A  ++E+VGCG PR DV + IV P   + L  G VGEIW+ SPS  +GY+     T+ MFHA +         NE             P+ Y+RTGDLG LY  ELFVCGRLKDL+IVRG+N+YPQDIEK  EG     +RPGCSAAFS+ ++ +                                        LA  +   ++   GVS++ L  +  HSIPKTTSGK++R  ++ AF+ ++L     I++
Sbjct:    8 VLGRLDHWATVQPKKNLFAFVDDNGQVTDSVTYDDVQSRSSNLAKWMLTSPSVSSKGLGL-----SKGDIVLLVYPPGLDFIVAFLACLRAGVVAVPVYPPDPRKLRKDIAMFTTVCSNAGAKVALTNSTYNYAKKVVAI------QQKVTFSEKFPWP-DLRWVESDGLVLTSPPPSPSSTPWLLVPPSLDDLAFLQYTSGSTSEPKGVMISHGNLGHNLSMIASALEATDDSVVVSWLPQYHDMGLIGAYLGVLFTGGHGVYMSPFSFIKNPLVWIRLISQYRATHLQAPNFAYALCARKFAT-ANPSQTSTSITTSNTTSSCKLDLSSVRHMINGAEPIDGDAIDAFYRAFEPYGLCRGVVRPTYGLAEHTVYVCDSSPQLLQVQVDKEALE----------HHDVFQPVADKARATKEMVGCGAPRSDVDVRIVHPDTHKELAAGSVGEIWIRSPSTTQGYFGLNDLTREMFHATIV-------SNE-------------PQHYMRTGDLGVLYQGELFVCGRLKDLIIVRGRNHYPQDIEKTVEGFPD--IRPGCSAAFSISTNGI------------------HEGLGVVAEVRDANVPRAALEALAASVRQAVSVEHGVSVTALALVSTHSIPKTTSGKISRKRSKEAFVGQTLTELYRIFK 613          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: OQR98230.1 (fatty-acid-CoA ligase [Thraustotheca clavata])

HSP 1 Score: 465.7 bits (1197), Expect = 3.400e-127
Identity = 283/644 (43.94%), Postives = 356/644 (55.28%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGL-XXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPSFDLSS----LRGREGGEGG----------------GVIFPTYGLAEHTVFVCGGGRQ--RLWVEKESLEGGGEEEGEGPSTAAVVPTPPHAPGSRELVGCGVPREDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSLP 642
            LL RL  W   QP K   +F DD G  V SL+Y +       +A  +L  PS  A+   L     +K D ++LV+ P LDF VAF+ACL AG+V VPV+PPDPR+L KD+ MFT++ ++SGAK ALT A YNH+KK   I      K++        WP EL W+  + L                     FLQYTSGSTS+PKGV +SHGNLSHNL IISE L    +++ VSWLPQYHDMGLIG+YLG+LY GGSG Y SP SFI+ P LW++L+S+Y+ATH QAPNFAYAL A+K+     P P+ DLSS    + G E  +G                 GV+ PTYGLAEHTV+VC    +  R+ V K  LE   + E    ST         A   +E+VGCG P  DV ++ VD  LR + P G VGEIWV S S  +GY+  P  T+ MFHA +A AP                      +Y+RTGDLG  Y E+LF+CGRLKDL+I+RG+N+YPQDIEK  EG D   +RPGCSAAFS   S                                          LA  I   +AS  GV+L   +FL   +IPKTTSGK++R   + AFL +SLP
Sbjct:    6 LLDRLNQWALEQPEKTIYSFADDSGSVVASLSYKDFDEETANLARLMLASPSSHAKGMGL-----KKNDKLVLVYPPGLDFIVAFVACLRAGVVAVPVYPPDPRKLKKDIVMFTTVWSNSGAKTALTCANYNHVKKILDI------KQKMTFSESYPWP-ELKWIETDRLGKNKAAPNTVNLPVPDLNDLAFLQYTSGSTSDPKGVMVSHGNLSHNLSIISEALNARNNSVVVSWLPQYHDMGLIGAYLGILYTGGSGVYISPFSFIKNPNLWIQLISKYKATHLQAPNFAYALCARKF----VPSPNLDLSSVCHMINGAEPIDGAAIDNFYATFKPYGLRQGVVRPTYGLAEHTVYVCDSAPELTRIKVIKSVLETEDKFEFATSSTP--------AQDIKEMVGCGSPEVDVRVVNVD--LRVAQPEGLVGEIWVSSKSTTQGYYNMPDLTKEMFHATLANAPDV--------------------EYVRTGDLGVFYKEQLFICGRLKDLIIIRGRNHYPQDIEKTIEGFD--AIRPGCSAAFSALLSD---------------------DEVLCAMAEVRPEATVSLDQLATSIRQAVASEHGVTLEGFVFLNARAIPKTTSGKISRKRCKVAFLTKSLP 580          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: CBN76691.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 454.9 bits (1169), Expect = 6.100e-124
Identity = 276/659 (41.88%), Postives = 357/659 (54.17%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGLXXXXXXXXXXXXXXXXGAT--CFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPSFDLSSLRG--------------------REGGEGGGVIFPTYGLAEHTVFVCGGGRQRLWVEKESL---------EGGGEEEGEGPSTAAVVPTPPHAPGSRELVGCGVPRE--DVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVA-----PAPRATGGNEEGGGEEAREGEVQPRD-YLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSL 641
            LL  + +W    PSK ALTF+DD G EVD+LTY     R+  +A+ LL                + KG   +LV+ P LDFTVA+LACL AG++ VP +PPDPRRL KDL+MF +IQ SSGA +ALT+  YN+ KK + I   F G           WP EL WV  + L                  T   F+QYTSGSTSEPKGV I+H NL+ NL++I   L    DT+ V+WLPQYHDMGLIGS L LL+ GGSG+Y SP+SFI+RP LW+EL+S+++ TH QAPNFAY L A+K+  L +P+P  DLS +R                        G   GVIFPTYGLAEHTV+VC  G+ RL V++  L         E   E    G   A  V        +  +VGCG P++   V L IVD     +LP G VGEIWV S S+A GYW  P++T   F   +A     PAP A          E   G   P D YL+TGDLGFL++ EL++CGR+KDL+IVRG+N+YPQD+E+ AEG     +R GCSAAF +  +                                          LA  I   +A+  G SL+++  L P +IPKTTSGK++R   ++A +  +L
Sbjct:    7 LLGAIDYWAETTPSKTALTFLDDAGAEVDALTYSAVLRRSNALASHLLD------------KLGLVKGSTCLLVYPPCLDFTVAYLACLRAGVIAVPCYPPDPRRLKKDLHMFKAIQGSSGATVALTNRSYNYAKKMADIKGMFSG--------GASWP-ELNWVVTDSLASATAADEDTGRFSIPVPTDVAFVQYTSGSTSEPKGVMITHSNLADNLKLILAGLSAVDDTVVVAWLPQYHDMGLIGSVLALLFSGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFLAL-DPQPQLDLSCVRHMINAAEPVDTASIDRFYSVFEAHGLKRGVIFPTYGLAEHTVYVCSNGKDRLVVDRVMLETERKIRPVENKLELWAYGMDGAGTVGGKDDGVLTTVVVGCGRPKDCAGVDLRIVDTETLSALPEGNVGEIWVTSKSRAAGYWSQPEKTAEAFGGRLANDGDGPAPVA----------EGTVGHGAPADGYLKTGDLGFLWEGELYICGRIKDLIIVRGRNHYPQDLERTAEGAVAGSLRGGCSAAFGLAGAD-------------------GGESLAIVAEVQQAGAGFDGQALAAEIRKVVAAEHGASLAMVRLLRPRTIPKTTSGKISRTMCKKAHVSGAL 614          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: XP_008616893.1 (hypothetical protein SDRG_12598 [Saprolegnia diclina VS20] >EQC29589.1 hypothetical protein SDRG_12598 [Saprolegnia diclina VS20])

HSP 1 Score: 453.0 bits (1164), Expect = 2.300e-123
Identity = 278/642 (43.30%), Postives = 352/642 (54.83%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGLXXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPSFDLSSLR----GREG----------------GEGGGVIFPTYGLAEHTVFVCGGGRQ--RLWVEKESLEGGGEEEGEGPSTAAVVPTPPHAPGSRELVGCGVPREDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSL 641
            LLARL  W   QP K    F DD G    SLTY E   R L +A  +  P S +        +P  K   V+LV+ P LDF VAF+ACL AG+V VPV+PPDPR+L KD+ MFT++ +++GAK ALT A YNH+KK   I      K++        WP +L WV  + L                 A  FLQYTSGSTS+PKGV ISHGNL+ NL +I + L   TD + VSWLPQYHDMGLIG+YLG+L+ GG+G Y SP SFI+ P LW+EL+++++ATH QAPNFAYAL A+K++  P+   S DLSS+R    G E                 G   GV+ PTYGLAEHTV+VC        L V K  L      E E     A   TP  A   +++VGCG P+  V + IV+   RR+ P G VGEIW+ S S  +GY+  P  TQ MFHA +  AP                       Y+RTGDLG L + +LFVCGRLKDL+IVRG+N+YPQDIEK+ E  D   +RPGCSAAFSV  +                                          LA  I S +A+  GV L+ ++F+   SIPKTTSGK++R   + AFL +SL
Sbjct:    5 LLARLDRWGAEQPEKTVYAFADDNGIITASLTYKELDERTLNLARWMRAPASAKGMGL----SPDEK---VLLVYPPGLDFIVAFVACLRAGVVAVPVYPPDPRKLRKDIVMFTTVCSNAGAKTALTCASYNHVKKILDI------KQKMTFSERYPWP-DLAWVETDRLVHAPAPSSSTLAAPSADAIAFLQYTSGSTSDPKGVMISHGNLTSNLHLIVDALAARTDAVVVSWLPQYHDMGLIGAYLGILFAGGNGVYLSPFSFIKNPSLWIELMAKHKATHLQAPNFAYALCARKFK--PSSPSSLDLSSVRHMINGAEPVDVHAIEAFYATFSPLGLPRGVVRPTYGLAEHTVYVCDSSPSLTHLRVVKSVL------ESEDKMERATAATP--ANDVKDMVGCGEPK--VDMRIVNADTRRTQPDGTVGEIWIRSSSTTQGYFNLPALTQEMFHASLVDAPEV--------------------HYMRTGDLGVLCERQLFVCGRLKDLIIVRGRNHYPQDIEKSVEAFD--AIRPGCSAAFSVALNG-------------------QDDEVLCVLAEVRPEASQPLSELANAIRSAIAAEHGVQLTGVVFVESRSIPKTTSGKISRRRCKTAFLGQSL 579          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: XP_008871071.1 (hypothetical protein H310_07478 [Aphanomyces invadans] >ETW00046.1 hypothetical protein H310_07478 [Aphanomyces invadans])

HSP 1 Score: 453.0 bits (1164), Expect = 2.300e-123
Identity = 275/643 (42.77%), Postives = 349/643 (54.28%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGLXXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPSFDLSSLR----GREGGEG----------------GGVIFPTYGLAEHTVFVCGGGRQ--RLWVEKESLEGGGE-EEGEGPSTAAVVPTPPHAPGSRELVGCGVPREDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSL 641
            +L RL HW   QP K    FVDD G+  DSL Y + H R+  +A  +L  PS  +Q   L      +GD V+LV+ P LDF VAFLACL AG+V VPV+PPDPR+L KD+ MFT++ ++SGAK+ALT++ YN+ KK   I      K++        WP +L W+   G                     FLQYTSGSTS+PKGV ISHGNL HNL +IS  L    D+I VSWLPQYHDMGLIG+YLG+L+ GG G Y SP SFI+ P  WL L+SQ+ ATH QAPNFAYAL A+K+     P    DLSS+R    G E  +G                 GVI PTYGLAEHTV+VC       R+ V+K++LE   +    EG S+           G +E+VGCG PR  V L IV P+   S+P G VGEIW+ S S  +GY+   + T+ MF A +A  P                       ++RTGDLG LY  ELFVCGRLKDL+IVRG+N+YPQDIEK  EG     +RPGCSAAFS+                                             +A  I   ++   GV +S +  +  H+IPKTTSGK++R  A+  F+ R L
Sbjct:    5 VLGRLDHWAAHQPKKNLFAFVDDNGRVTDSLLYEDVHTRSANLAKWMLTSPSVSSQGLGL-----SRGDIVLLVYPPGLDFIVAFLACLRAGVVAVPVYPPDPRKLRKDIVMFTTVCSNSGAKIALTNSAYNYAKKVLDI------KQKVTFSEKFAWP-DLHWMETNGQLESTAPPPLAIPPPSPNDLAFLQYTSGSTSDPKGVMISHGNLGHNLTLISTALSATDDSIVVSWLPQYHDMGLIGAYLGVLFTGGHGVYMSPFSFIKNPSGWLRLISQHHATHLQAPNFAYALCARKFVAGTAP---LDLSSVRHMINGAEPIDGDAVDAFYKVFKPFGLCDGVIRPTYGLAEHTVYVCDSSPHLLRVVVDKDALEHHDKFVPIEGTSSG----------GVKEMVGCGKPRPGVDLRIVHPASHASVPTGTVGEIWIRSSSTTQGYFGLDELTREMFGATIANEP-------------------TDHFFMRTGDLGVLYQGELFVCGRLKDLIIVRGRNHYPQDIEKTVEGFPD--IRPGCSAAFSMSLQG-------------------QEVLGVVAEVRGAQMAQPTLEAIAASIRQAVSVEHGVLVSAMALVATHTIPKTTSGKISRRRAKVDFVDRKL 582          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: XP_002185164.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43296.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 452.2 bits (1162), Expect = 3.900e-123
Identity = 271/647 (41.89%), Postives = 358/647 (55.33%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFV---DDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGLXXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPSFDLSSLRG-----------------REGGEGG--GVIFPTYGLAEHTVFVCGGGRQRLWVEKESLEGGGE----EEGEGPSTAAVVPTPPHAPGSRELVGCGVP-REDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSL 641
            +L RL       P+KRA+ F+    + G     LTY E      ++A               L+   + KG+CV+LV+ PSLDF +AFLACL A +V VPVFPP+P R    L MF +I    GAK ALT+  YNH KK + I   F   +R        WP++L W   + L                    FLQYTSGSTSEPKGV I+HGNL+HNL II+ + +   DT+ VSWLPQYHDMGLIGSYLG+L+CGG+GYY SPLSF++RP++W+E +S+Y+ATH QAPNFA+ L A+K+ ++       DLSS+R                  R  G+ G   VI+PTYGLAEHTVFVC GG+QRL V+K  LE   +    E+ +  ST              +L+GCG P R++V + IVDP   ++L    VGEIW+ SPSKA GY+  P+ET+  FHA +     ++ GN  GG             YLRTGDLGFL+  ELF+CGRLKDL+IV G+NYYPQDIE  AE     +VR GCSAAF++  +                                          LA +I S +     + L+ ++FL P ++PKT+SGK+AR+W R+ F+  SL
Sbjct:   12 MLDRLAQNVSRNPAKRAVAFLAGGRNGGSLQKELTYQELETETTKVAK-------------HLIGKGIEKGECVVLVYPPSLDFMIAFLACLKANVVAVPVFPPNPLR-RDTLAMFANIVQGCGAKHALTNTEYNHAKKMAGIRDVFTKFQR----PTSGWPDDLDWTTTDTLKEPRNSVNLPQPPSDRSQVAFLQYTSGSTSEPKGVMITHGNLAHNLTIITNDSQAKDDTVVVSWLPQYHDMGLIGSYLGVLFCGGTGYYLSPLSFLQRPMVWIEAVSRYRATHLQAPNFAFKLTARKF-SIDASNTELDLSSVRHVINAAEPVDEESIDNFYRIFGKYGFANVIYPTYGLAEHTVFVCSGGKQRLTVDKAKLEIDAKVVILEDDDHQST--------DIKAVSKLIGCGFPSRQNVDVQIVDPESCKALAGNLVGEIWIRSPSKAAGYFNKPKETKEDFHAGLVSDDGSSIGNAVGG-------------YLRTGDLGFLHKHELFICGRLKDLIIVGGRNYYPQDIEATAE-ASSDLVRLGCSAAFTIDPT--------------HEGGEEVALVMELKEAPSLKATQTVCESLANQIKSAINQEHSLGLTDIVFLHPRTVPKTSSGKIARSWCRKGFIAGSL 603          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: OQR91630.1 (fatty-acid-CoA ligase [Achlya hypogyna])

HSP 1 Score: 446.8 bits (1148), Expect = 1.600e-121
Identity = 272/642 (42.37%), Postives = 349/642 (54.36%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGLXXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPSFDLSSLR----GREGGEGG----------------GVIFPTYGLAEHTVFVCGGGRQ--RLWVEKESLEGGGEEEGEGPSTAAVVPTPPHAPGSRELVGCGVPREDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQETQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSL 641
            LLARL  W   QP K    F DD G    +LTY E   R L +A  +L  PS  A+   L     ++ + V+LV+ P LDF VAF+ACL AG+V VPV+PPDPR+L KD+  FT++ +++GAK ALT A YNH+KK   I      K++        WP EL+WV  + L                 A  FLQYTSGSTS+PKGV ISHGNLSHNL +I++ L    D + VSWLPQYHDMGLIG+YLG+L+ GG+G Y SP SFI+ P +W+EL+ +++ATH QAPNFAYAL A+K++ L       DLSS+R    G E  + G                GV+ PTYGLAEHTV+VC    Q  RL V K  L      E E     A   TP  A   +E+VGCG P  DV   +V+   RR  P G VGEIW+ S S  +GY+     T  MF A +  AP                       Y+RTGDLG LY ++LF+CGRLKDL+IVRG+N+YPQD+EK  EG +   +RPGCSAAF+                                              LA  I   +A+  GV L+ ++F+   SIPKTTSGK++R   + AFL ++L
Sbjct:    5 LLARLDRWASAQPDKTIYAFADDNGIVTATLTYKEFDDRTLNLARWMLASPSSNAKGMGL-----QRDEKVLLVYPPGLDFIVAFVACLRAGVVAVPVYPPDPRKLRKDIVQFTTVCSNAGAKTALTCASYNHVKKVLDI------KQKMTFSEKYPWP-ELSWVETDRLVHTAAPDAGPLPAPSADAIAFLQYTSGSTSDPKGVMISHGNLSHNLNLIADALAAREDAVVVSWLPQYHDMGLIGAYLGVLFTGGNGVYMSPFSFIKNPSIWIELIGKHKATHLQAPNFAYALVARKFKGL----AGLDLSSVRHMINGAEPIDAGAIDAFYAALAPYGLRAGVVRPTYGLAEHTVYVCDSSPQLTRLRVVKSVL------ETEDKLVLANEATP--AQDVKEMVGCGQPVVDVR--VVNADTRREQPAGTVGEIWIRSGSTTQGYFGQAALTDEMFRASLVEAP--------------------DTHYMRTGDLGVLYQKQLFICGRLKDLIIVRGRNHYPQDVEKTIEGFEE--IRPGCSAAFAAAVGD---------------------GEVLCMMAEVRPETTQPLAELAAAIRMAVAAEHGVQLAGVVFVETRSIPKTTSGKISRRRCKVAFLSQTL 577          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: ETP48590.1 (hypothetical protein F442_05675 [Phytophthora parasitica P10297])

HSP 1 Score: 445.7 bits (1145), Expect = 3.700e-121
Identity = 269/652 (41.26%), Postives = 357/652 (54.75%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGL---XXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPS---FDLSSLR----GREGGEG----------------GGVIFPTYGLAEHTVFVCGGGRQRLWVEKESLEGGGE-EEGEGPSTAAVVPTPPHAPGSRELVGCGVP-RED--VSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQE--TQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSL 641
            LL R+  W    PSK  L+F DDKG    SLT  E + R   +A  LL      ++   L      +GD V+LV+ P LDF V FLACL AG+V VPV+PPDPR++ KD++MF S+  +  AK ALT + Y ++KK S I      KE+        WPE L WV  + L                    +T FLQYTSGSTS PKGV +SHGNL+HNL+ IS  L+   DT+ VSWLPQYHDMGLIG+YLG ++ GG G Y SP SFIR P LWL L+S+++ATH QAPNFAY+L A+K   L     S    DLSS+R    G E  +G                 GV+ PTYGLAEHTV+VCGGG+QRLWV+K+ LE        E  +TA +V         +E++GCGVP R+D  + + IVD       P G  GEIW+ S SKA+GY+       +   F A V                    G+ + + +L+TGDLG +Y++ELF+CGR+KDL+I+RG+N+YPQD+E +AE  +   +RPGC AAFS  +                                           L  +I S +A   GV ++L++ L PHSIPKTTSGK++R+  ++A   ++L
Sbjct:    5 LLERVEKWAAETPSKTMLSFADDKGVVTASLTCAELNKRMQNLAGLLLASTQQHSKGLGL-----NQGDRVLLVYPPGLDFIVVFLACLKAGVVAVPVYPPDPRKMKKDISMFVSVTQNCQAKTALTCSMYYNVKKISAI------KEKFTFSGAAQWPEHLNWVVTDDLVDTKGIDPAKHWLTQSPSADSTAFLQYTSGSTSAPKGVVLSHGNLNHNLRTISSALQAGRDTVVVSWLPQYHDMGLIGAYLGTIFNGGKGVYLSPFSFIRDPCLWLRLVSKHRATHLQAPNFAYSLLARKSDRLTVGLASGQHVDLSSVRHMINGAEPIQGEAIDNFYRAFSPFGLPEGVVKPTYGLAEHTVYVCGGGQQRLWVDKQELESNRVFRVVEKTNTAGLV---------KEMIGCGVPSRKDYGIDIRIVDAETEEEKPEGETGEIWISSASKARGYYGDEMREFSAEAFQAKVV-------------------GDTEGKTFLKTGDLGVIYNQELFICGRMKDLVIIRGRNHYPQDLEASAESHEE--LRPGCCAAFSYLADG------------------NADDEQLAVMAELRDPAMTSKASLCGKIRSAIAREHGVKVTLVVLLAPHSIPKTTSGKISRSRCKKALEEKTL 597          
BLAST of NO23G01140 vs. NCBI_GenBank
Match: XP_008903130.1 (hypothetical protein PPTG_10236 [Phytophthora parasitica INRA-310] >ETI50883.1 hypothetical protein F443_05633 [Phytophthora parasitica P1569] >ETN11321.1 hypothetical protein PPTG_10236 [Phytophthora parasitica INRA-310])

HSP 1 Score: 442.2 bits (1136), Expect = 4.100e-120
Identity = 268/652 (41.10%), Postives = 356/652 (54.60%), Query Frame = 0
Query:   21 LLARLRHWCHVQPSKRALTFVDDKGKEVDSLTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLDFTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAPYNHIKKASQIVSFFKGKERXXXXXXXXWPEELTWVAIEGL---XXXXXXXXXXXXXXXXGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTIEVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQATHTQAPNFAYALAAKKYRTLPNPKPS---FDLSSLR----GREGGEG----------------GGVIFPTYGLAEHTVFVCGGGRQRLWVEKESLEGGGE-EEGEGPSTAAVVPTPPHAPGSRELVGCGVP-RED--VSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQE--TQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEELFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARRILSHLASSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSL 641
            LL R+  W    PSK  L+F DDKG    SLT  E + R   +A  LL      ++   L      +GD V+LV+ P LDF V FLACL AG+V VPV+PPDPR++ KD++MF S+  +  AK ALT + Y ++KK S I      KE+        WPE L WV  + L                    +T FLQYTSGSTS PKGV +SHGNL+HNL+ IS  L+   DT+ VSWLPQYHDMGLIG+YLG ++ GG G Y SP SFIR P LWL L+S+++ATH QAPNFAY+L A+K   L     S    DLSS+R    G E  +G                 GV+ PTYGLAEHTV+VCGGG+QRLWV+K+ LE        E  +TA +V         +E++GCGVP R+D  + + IVD       P G  GEIW+ S SKA+GY+       +   F A V                    G+ + + +L+TGDLG +Y++ELF+CGR+KDL+I+RG+N+YPQD+E +AE  +   +RPGC AAFS  +                                           L  +I S +A   GV ++L++ L P SIPKTTSGK++R+  ++A   ++L
Sbjct:    5 LLERVEKWAAETPSKTMLSFADDKGVVTASLTCAELNKRMQNLAGLLLASTQQHSKGLGL-----NQGDRVLLVYPPGLDFIVVFLACLKAGVVAVPVYPPDPRKMKKDISMFVSVTQNCQAKTALTCSMYYNVKKISAI------KEKFTFSGAAQWPEHLNWVVTDDLVDTKGIDPAKHWLTQSPSADSTAFLQYTSGSTSAPKGVVLSHGNLNHNLRTISSALQAGRDTVVVSWLPQYHDMGLIGAYLGTIFNGGKGVYLSPFSFIRDPCLWLRLVSKHRATHLQAPNFAYSLLARKSDRLTVGLASGQHVDLSSVRHMINGAEPIQGEAIDNFYRAFSPFGLPEGVVKPTYGLAEHTVYVCGGGQQRLWVDKQELESNRVFRVVEKTNTAGLV---------KEMIGCGVPSRKDYGIDVRIVDAETEEEKPEGETGEIWISSASKARGYYGDEMREFSAEAFQAKVV-------------------GDTEGKTFLKTGDLGVIYNQELFICGRMKDLVIIRGRNHYPQDLEASAESHEE--LRPGCCAAFSYLADG------------------NADDEQLAVVAELRDPAMTSKASLCGKIRSAIAREHGVKVTLVVLLSPRSIPKTTSGKISRSRCKKALEEKTL 597          
The following BLAST results are available for this feature:
BLAST of NO23G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009845094.13.300e-13042.00hypothetical protein H257_17844 [Aphanomyces astac... [more]
XP_009845095.13.300e-13042.00hypothetical protein, variant [Aphanomyces astaci]... [more]
OQR98230.13.400e-12743.94fatty-acid-CoA ligase [Thraustotheca clavata][more]
CBN76691.16.100e-12441.88conserved unknown protein [Ectocarpus siliculosus][more]
XP_008616893.12.300e-12343.30hypothetical protein SDRG_12598 [Saprolegnia dicli... [more]
XP_008871071.12.300e-12342.77hypothetical protein H310_07478 [Aphanomyces invad... [more]
XP_002185164.13.900e-12341.89predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OQR91630.11.600e-12142.37fatty-acid-CoA ligase [Achlya hypogyna][more]
ETP48590.13.700e-12141.26hypothetical protein F442_05675 [Phytophthora para... [more]
XP_008903130.14.100e-12041.10hypothetical protein PPTG_10236 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01140.1NO23G01140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|197287gene_8469Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101391g1gene7520Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01140.1NO23G01140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01140 ID=NO23G01140|Name=NO23G01140|organism=Nannochloropsis oceanica|type=gene|length=5002bp
ATGCCGGCTCCACCCTCCGCGCCGCCTCCTTCCCAGCCTCCTCCCCCCCT
CCCTCGCACATTACTAGCCCGCCTCAGGCATTGGTGCCACGTACAGCCAT
CCAAGCGCGCCTTGACCTTTGTCGACGACAAGGGAAAGGAAGTTGACTCA
TTAACGTACGGAGAAACGCATGCTCGTGCCCTGAGAATCGCCAATGGACT
CCTTCCTCCTCCCTCCCCCCGGGCCCAGACAGCACCTCTCTTGCCCACCC
CTGTGCGAAAGGGTGACTGCGTGATCCTCGTCTTCCTTCCCTCCCTCGAC
TTCACTGTCGCCTTCCTGGCTTGTCTCATGGCAGGCTTGGTCCCCGTCCC
TGTCTTCCCACCGGACCCTCGGCGCTTAAACAAGGACCTCAATATGTTCA
CTTCCATCCAGgtaaagtcaagaggagggaaggcagggagggagggaggt
tgcgtgaagagtggtgctgccatgcaacaatgcggcttctcaggactcat
gccctggacttctttctctccctccctccatccacacatgtcaactcttc
cggccacccctccttccctccctccttccctccctccatagGCCTCCTCA
GGAGCAAAACTTGCTCTCACCCACGCTCCCTACAATCACATCAAAAAAGC
ATCCCAGATCGTCTCTTTCTTCAAGGGAAAGGAGAGAGGGAGGGAAGGAG
GGAAGGAGGGGTGGCCGGAAGAGTTGACATGGGTGGCCATCGAGGGGCTC
GGGAAGACGGGAGGGAAGGAGGGAGGGAGGGAGGGAGAGGAGGAAGAGGG
GGCGACGTGTTTTTTGCAGTATACCTCCGGGTCCACAAGCGAGCCGAAAG
gtggatagggagggagggagggaagttggaggaagggagggaagataagg
tggaagaaccttgtaagtgttcgtctcacttcttctctgctcgccccacc
tccctcactccatcactcctctttccagGCGTTGAAATTTCCCACGGAAA
CCTGAGTCATAATTTACAAATTATTTCCGAAGAACTGGAGACAAATACGG
ACACCATTGAGgtatgtcctgcccctccctccctccctccctccctccct
ccctacctcttctccacacaccctcgctcccttattccctccctcccgcc
ctttccccctctgtccctccccaatcagGTCTCCTGGCTTCCCCAGTACC
ATGACATGGGCCTTATCGGCTCCTACCTTGGCTTGCTCTATTGCGgtgag
gaagggggggaggaaggggggaggaaggggggaggaaggggggaatacgg
ctcaaatatgcaagggtcggattttgtgggtccctcatgccctccctccc
tccctccctccctccctccctccccccctccctcagGCGGGAGCGGGTAC
TACACTAGCCCTCTCTCCTTCATTCGTCGGCCTCTCCTGTGGTTGGAGCT
TTTGTCGCAATATCAGGCGACACATACACAGgtagggaggcagggaggaa
gggagggagggagggaggaagggagggagggaaggagagagggggatcct
cactatcctccccatccctcatcacagGCGCCCAATTTTGCCTACGCCCT
CGCTGCCAAGAAATACCGGACCTTGCCAAACCCCAAGgtgagccctccct
ccctccctgcctccctccctccctccctaccctccatcccttgcatcctt
tcttccgtcccttccttccctcccttcctccccctcgtacctagcccgct
cagccccttatttgacactcctctgcccccacatcttggaaacctgaaga
cattacatatcaaatacccctcgctccctccctccctcccttcctccccc
cagCCCTCCTTCGACCTCTCCTCCCTCCgtcacatggtcaatgccgccga
gcctgtcgatggcccgacactcgactctttcacctcctgcttcctctcct
cctcctcctcctcctcctcctcctcctccacctcttccgtttccggaaag
GAGGGAGGGAAGGAGGGGAGGGGGGGGGGGTGATTTTCCCGACCTACGGA
TTGGCGGAGCACACGGTCTTTGTGTGTGGAGGAGgtgagggagggaggga
gggagggaggggagaagggagagagggagggatggatcgaaatagaaccg
agtacggcaccactatcctccttcccttcctcacaccctccctccctccc
ttcctccctccctccctccctccctccttagGACGTCAACGCCTGTGGGT
GGAGAAAGAAAGCCTCGAGGGAGGGGGGGAGGAAGAGGGGGAGGGGCCTT
CGACGGCTGCTGTGGTGCCCACTCCTCCTCACGCACCTGGCAGTCGTGAA
TTGGTGGGATGCGGAGTCCCCCGGGAGGgtagggagggagggagggaggg
agggagggagggagggaggatcgccttccagagaccgagtaaaacagttt
ccctcagccccgtccgtccctccctccctccctcccctccccctctccct
tctcctgcagACGTGAGCCTCCTCATTGTCGACCCCTCCCTCCGTCGGTC
CCTCCCTCCCGGTCGCGTGGGAGAGATTTGGGTCGACTCCCCCTCCAAAG
CCAAGGGCTACTGGCGACACCCGCAGGAAACGCAGgtacgccctccctcc
ctccctccctccctccctttttttacagaatgatgggcttttgacgagct
gagcatgattggaagagggagggggggaaggaaggagggagggaataagg
ggggaagggagggaggaagggggggcttggctactgcgtaaggagggagg
gagggagggagggagggagggagggagggaagtttcctcaccgggtcctc
tcactcactttccacacagGCGATGTTTCACGCACTTGTCGCCCCCGCGC
CAAGAGCAACGGGGGGTAACGAGGAGGGCGGGGGGGAAGAAGCGAGGGAG
GGCGAGGTGCAGCCAAGAGACTACCTCCGCACAGGCGACCTTGGCTTTCT
CTATGATGAGgtgcctttctcctctccttccctccctccccctccctatc
tacctccctcctttcctcctttctttcttcctccttccctccctcctcct
tacactcagcttactcaaacttcctacacccatactcatcccccccccct
ccctccctccctccctccctccctccctccctccctccctgcccagGAGC
TCTTCGTCTGCGGCCGTCTCAAAGACTTGCTGATCGTCCGAGGCAAGAAT
TATTACCCCCAAGACATTGAGAAAGCTGCAGAGGGCGTGGACCCTAGCGT
AGTGAGGCCGgtaggtggccctccctccctccctccctccctccctccct
ccctctctccgtcccaccctccctcccttgcaccgagaggatcgggaaaa
ggcgcgggaggatcacgtggcccctggtacataaaggccgagaaaaacgc
ggaaggagagagggagggaggggagggaatgacgtgagggctcaggtacc
cattcactagaacgacccgacactcacatttattacacagGGATGCTCCG
CCGCCTTCTCCGTCCCCTCGTCCTCCCTCCCTCCCTCCTTCCCATCCTCC
TCCTCCTCCACCTCCTCCTCGTCCACGGACCTTCTTATCCTTCTCCTCGA
GCTCCGTTCCCCCCCTTCCATCCCTCCTTCCTCCTCCATCTACCCCTCCC
TTGCACGCCGCATCCTTTCCCACCTCGCGTCCTCTGAGGGAGTCTCCCTC
TCCCTCCTCCTCTTCCTCCCCCCTCACTCCATCCCCAAAACCACCAGCGG
GAAGGTCGCCCGTGCGTGGGCTCGAAGAGCCTTTCTCCATAGGTCCCTCC
CCCCTGCCCTCCATATCTGGGAGAGGACGGAGGGGCGAGAAGAGGAGGTG
GAGGTGATGGAGGAGGAGGAGGAGGAAAGGAGGGAGGGAGGGGGCGAAGA
GGCGGTGTTGAGGAGGATAGAGGCGTTGATCCGGAAAGCGATGGGGGAAG
GAGGGCAACAAGGAGGAAGGGAGGGAGGAAGGGAGGGAGAAGGAGGCATT
AATGGCGGGAATGGGGCCGATACCCACGAACAGCAGCAGCAGCAGCAGGT
GGAGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGACGATGAGAAGG
AGAGACGACAGGCAGGAACAACCACCTCTCCCTCTTCCCTCCCTCACCTC
CCTCCCTCCCTCCCCCTCCATGGCATCCCCCTCTCCTACCTCGGTCTCGA
CTCCCTTACCCTTGCGCAGTTAAAGGCTCGGATCGAAACAGAATTCTGTC
CGCCTTCCCTTGCTCCTCCTCCTCCTCCTTTTCCTCCTCCTCCAGCTCCA
TCTCCTTTACCTCGTCTTGTTCCGGCTGCTGCTGAGGAAGGGATGGAGGG
CGAGGGAGGGAGGGAGGGATGGCTGCCCGATGAGTATTTTTTCAGGGAGG
AGACTACAGGGGGGCATATCGCGGCCATGGTGTGGGCGGTGAGGGAGGGA
GGGAGAAAGGGAGGGAAGGAGGGAGGGAGGGAAGGAGAGGGGGGCATGAG
GCCGGAGGAGGCGTGGGAGGTGTATGAGAATTGGTGTCGGCGGGAAAAGG
AGGAGGGGAGGGAGGGAGGGGGGAGGGGGGTGATGGAGGTAGAGATGGTG
ATGAGGGCGAGGAGGAGGGAGGGGGGAGGAGGAGATGGAAGGAGTGGGTG
CTTCAGATTTCACCGTGCTGCTTGCTGTTGCCTTGCTGCCGGTGAGGAGG
AAGGAAGGGGGTGAGGAATGGGGGCAAGGAGGGGCGTAGAGGCCTGTAGA
AGTGTAATGCGTCACACATGATGTTTGATCGCCGACAACGAAAAGGGAAG
GAAGGAAGGAAGGAGGGAGGGAGGGGTGGGATGCCAGGTGGGGGGAGGTT
CAACATGACGGTGGTCCTCATCGCGGTGCTCTTCTTTCTCCAGACAAGGC
AACAAGGGTATGAAAATATATTAAAATCAACGAGAACGAGTGTCATGTCT
GC
back to top

protein sequence of NO23G01140.1

>NO23G01140.1-protein ID=NO23G01140.1-protein|Name=NO23G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=945bp
MPAPPSAPPPSQPPPPLPRTLLARLRHWCHVQPSKRALTFVDDKGKEVDS
LTYGETHARALRIANGLLPPPSPRAQTAPLLPTPVRKGDCVILVFLPSLD
FTVAFLACLMAGLVPVPVFPPDPRRLNKDLNMFTSIQASSGAKLALTHAP
YNHIKKASQIVSFFKGKERGREGGKEGWPEELTWVAIEGLGKTGGKEGGR
EGEEEEGATCFLQYTSGSTSEPKGVEISHGNLSHNLQIISEELETNTDTI
EVSWLPQYHDMGLIGSYLGLLYCGGSGYYTSPLSFIRRPLLWLELLSQYQ
ATHTQAPNFAYALAAKKYRTLPNPKPSFDLSSLRGREGGEGGGVIFPTYG
LAEHTVFVCGGGRQRLWVEKESLEGGGEEEGEGPSTAAVVPTPPHAPGSR
ELVGCGVPREDVSLLIVDPSLRRSLPPGRVGEIWVDSPSKAKGYWRHPQE
TQAMFHALVAPAPRATGGNEEGGGEEAREGEVQPRDYLRTGDLGFLYDEE
LFVCGRLKDLLIVRGKNYYPQDIEKAAEGVDPSVVRPGCSAAFSVPSSSL
PPSFPSSSSSTSSSSTDLLILLLELRSPPSIPPSSSIYPSLARRILSHLA
SSEGVSLSLLLFLPPHSIPKTTSGKVARAWARRAFLHRSLPPALHIWERT
EGREEEVEVMEEEEEERREGGGEEAVLRRIEALIRKAMGEGGQQGGREGG
REGEGGINGGNGADTHEQQQQQQVEEEEVEEEEEEEDDEKERRQAGTTTS
PSSLPHLPPSLPLHGIPLSYLGLDSLTLAQLKARIETEFCPPSLAPPPPP
FPPPPAPSPLPRLVPAAAEEGMEGEGGREGWLPDEYFFREETTGGHIAAM
VWAVREGGRKGGKEGGREGEGGMRPEEAWEVYENWCRREKEEGREGGGRG
VMEVEMVMRARRREGGGGDGRSGCFRFHRAACCCLAAGEEEGRG*
back to top
Synonyms
Publications