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Properties
| Property Name | Value |
|---|
| Description | Integrase/recombinase |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr23 | genome | chr23:412891..415425 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO23G01130 vs. NCBI_GenBank
Match: EWM22929.1 (Integrase/recombinase, partial [Nannochloropsis gaditana]) HSP 1 Score: 83.6 bits (205), Expect = 3.300e-12 Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 0
Query: 718 LWAEFQYFLSKERAIALSTSKSYCERLTRFLVDLQDGGSLKGTDAVVARSREEARRYVEDRWGKACAVAAEANRAKLCAWRHFLRFMGLTLGEREE 814
+W EFQ +++ E+A++ STS SY +R+ RFL+D+++G A +RE AR YVE +W A AVA+ A R K+ AW HFL ++GL G+ +E
Sbjct: 46 VWEEFQGWMAAEKALSPSTSHSYSKRVARFLIDMEEGRE----QAEKVMNREGARAYVERKWEVASAVASSALRVKMNAWNHFLNYLGLGGGDGKE 137
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01130 ID=NO23G01130|Name=NO23G01130|organism=Nannochloropsis oceanica|type=gene|length=2535bp
ATGGACCGTTGCCAAGACTTCCTGAGAGGGAACTCCCTCCCTCCCCACCT
TGCCCTCCAGCTGAATCTCCTCCCTCCTTCCGCAGAGAAAGGCGCAAAAA
GACAAATAGACGGGAAGGAGGGAGGAAGGGAGGGAGGAAAGGAGGGCGGT
GAAGGGCAGAGAGAAGGTGGGAGTTTTGGAGGGGAGGGAGGGGAGGAGGG
AGGGGGAAAGGAAGGGAGGGAGAGGTTGTCTTTGTACGAGTCAGTGTACT
ACACTGCGGTTATTGATCGATTGCTGTGTGAAGCCGTGTACTTCGCTCTC
TTGCTACAGCAGCAGCAGCAGGAGCAGGAGCAGGAGGGATGCGTGGGACA
AGAGCAAGGCGGAGAAGAGAGAGCCCTGCCACAAGGGGGAGGAAGGGAAG
GAGGAAGGGAAAGGGGGAAGGAGGTTGTGGTGCGAAAGATGAAACAGAAG
AGCGATGTAAGGGTTTTGGCAGAGTGGGAGGGAGTGGAAGAGGCCGTGGG
GGAGGCAGGGGACGAGGAGACTCAAAATGGATGGGCGCTGCTGAAATGGT
GGCTGAAGGGAGGGAGGAAAGGAGGAAGGAAAAAAAGGAAGGTGGAGATG
AGTAGCTACAGTTACAGCGATAGCAGCAGTAGCAGCAGCAGTAGCAGTGA
ACTGTCCAGCGACGAGGATCGGAAACGGGAGGTGGAGGAAACGGAAGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATGGTACCTCTCT
AGGGGATTGCAGGAGAGATTTAAGGGCTTTTTAAAGGAAAAGAACGAGTC
TATTGGGAGCAGTACATTGGAGGGGTACACGTCGGTGGTGGAGGAGGTGG
TGGAGCAGGTAGAGAGGGAGGAAGGGAGGGAGGGAGGGAAGAAGAGATTA
TTGAGGGAGGAAGAGGAGGCGCGGGAGTGGTTATGTGAGAATGCGGGCCG
AATCAGCGAGCAGGTGGAGGAGAGGATGACGCGCTCAGAGAAGGTAGCAT
GGACATTTTGGGTGCAGTTTTTGGAGGAGGAGGAAGAGGAGGAGGAGGAG
GAGGAGGATGAGGGAGAGGGATGGAGGGAAGGAAAGATGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGACAAGAGTATCGGGACGGCGGCTAGGATGGGGC
TGAGGGAGAGAGGGCGGGAAGGAGGGAGGAGGAGGGGAAGGGGAAAGGGA
CACTGCAGCTATAGTGTGATTGATTTGGGGCTCTCGCGGCGTTTCCTCGA
CTGGCTAGCTAGCGAGGTCCCTGTCCAGCAGCAGCAGCAGCAGCAGCACC
GCCACCACCACCACCACCAAAAAGCTCGAATTAAATCCCACAAGACCCGC
ACTCGGTATCTTCGCATGGCGCAAAAAACAGTCGCCGGCGTCCTCCTGCA
TCTTTGTAGGCCTTCCTCCCTCTCCTCTCCATCCTTCCCTTCCTCTCTCT
CCTCCCCAAGTGGTGGCGATGGTATCACCTGGGAGGGGAATGACAGCCAT
TACCTGAAGAAAATCCGCCCGTTGACTGCCCGAGATATCCGACCTTTTTA
CGAAGCAAATAAGACATTGTTTGCCCTGGTCTGGAAAGAGGAGGGGATCA
AGCTGAAGCGGTGTGCATGGGAGCATTTCGTGGAGTTTGCGGAGGAGGAG
GTAAGGATGGGAGGGAGAGGTGGCCGTGGAGGTGGGGAGGGAAGGTGGTT
TGAGGAGGAGGAGGAGGACGCAGGGGAGGAAGTTGAAGGAGAGGAGGAGG
AAGTGGTGGTGGTGGCGAAGAAGAAGAGGAAGAGAAGGACCAAGCAAGAG
ATGCTGATGTATAGAGAGGAGATGCGAAGGGATGAGGAGAACTCGAAGAA
CAAGAGGAAGAGGAGGAAGAGGAAGAAGAAGGTGAGAGAAGACGAGGGGG
AGGAAGACGAGGAGGACGCTCAATCTCTTCGCGCGAGCAGAGGCAGAGAA
AGGGGAAGACGAGGAGGAAGACGAGGAGTAGCGAAGCCCGGGCGTTTAAA
ACAAGTGGCGTGTGATGGTCGCAGTCAAGGAGGAGGCAAGGAAGAAGGAA
GAGGTGCTGGACGAGGAAAGGAGAAAAGACATATGGCACCGTCCTCTCCC
TTCTCCTCTGCCTCCTCTTCCCACCCCTCTTATCCTTTGCTCTCCCCGGC
CCTGTGGGCCGAGTTTCAATACTTTCTATCGAAGGAGAGGGCGATCGCTT
TGTCGACGAGCAAGAGCTATTGCGAACGCCTCACTCGTTTCCTGGTCGAC
CTCCAGGACGGGGGAAGTTTGAAGGGAACGGATGCGGTGGTTGCGAGGAG
CAGGGAGGAGGCACGTAGATATGTGGAGGATAGGTGGGGCAAGGCGTGTG
CGGTAGCAGCAGAGGCAAATAGGGCGAAATTGTGTGCATGGAGACACTTC
CTAAGGTTTATGGGACTGACTCTTGGAGAGAGGGAGGAGGGGGAGGAGGG
AAAGGAAGGGGAGGGGGAGGGGGAGGGGGAAAGTGATTGGGTGAGTGCGG
AGGAGGAGGAGGAGGAGGATGATGAAGGAGAGTAA back to topprotein sequence of NO23G01130.1 >NO23G01130.1-protein ID=NO23G01130.1-protein|Name=NO23G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=845bp
MDRCQDFLRGNSLPPHLALQLNLLPPSAEKGAKRQIDGKEGGREGGKEGG
EGQREGGSFGGEGGEEGGGKEGRERLSLYESVYYTAVIDRLLCEAVYFAL
LLQQQQQEQEQEGCVGQEQGGEERALPQGGGREGGRERGKEVVVRKMKQK
SDVRVLAEWEGVEEAVGEAGDEETQNGWALLKWWLKGGRKGGRKKRKVEM
SSYSYSDSSSSSSSSSELSSDEDRKREVEETEEEEEEEEEEEEEEGWYLS
RGLQERFKGFLKEKNESIGSSTLEGYTSVVEEVVEQVEREEGREGGKKRL
LREEEEAREWLCENAGRISEQVEERMTRSEKVAWTFWVQFLEEEEEEEEE
EEDEGEGWREGKMEEEEEEEEEDKSIGTAARMGLRERGREGGRRRGRGKG
HCSYSVIDLGLSRRFLDWLASEVPVQQQQQQQHRHHHHHQKARIKSHKTR
TRYLRMAQKTVAGVLLHLCRPSSLSSPSFPSSLSSPSGGDGITWEGNDSH
YLKKIRPLTARDIRPFYEANKTLFALVWKEEGIKLKRCAWEHFVEFAEEE
VRMGGRGGRGGGEGRWFEEEEEDAGEEVEGEEEEVVVVAKKKRKRRTKQE
MLMYREEMRRDEENSKNKRKRRKRKKKVREDEGEEDEEDAQSLRASRGRE
RGRRGGRRGVAKPGRLKQVACDGRSQGGGKEEGRGAGRGKEKRHMAPSSP
FSSASSSHPSYPLLSPALWAEFQYFLSKERAIALSTSKSYCERLTRFLVD
LQDGGSLKGTDAVVARSREEARRYVEDRWGKACAVAAEANRAKLCAWRHF
LRFMGLTLGEREEGEEGKEGEGEGEGESDWVSAEEEEEEDDEGE* back to top
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