NO23G01050, NO23G01050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G01050 vs. NCBI_GenBank
Match: EWM22935.1 (hypothetical protein Naga_100763g5 [Nannochloropsis gaditana]) HSP 1 Score: 107.5 bits (267), Expect = 5.800e-20 Identity = 61/107 (57.01%), Postives = 68/107 (63.55%), Query Frame = 0 Query: 13 GKRASSPGNKALFRGIVFSTLAVATGDYICQQLEGEDEDGREGEVLLGQEQLQLPQHQQPQIRATPISTTKKEWDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPG 120 GK +SS G KAL RG+V STLAV TGDYICQQLEG E P Q A P+S K WDKERTLRMA ATA+VM+P SW+IVMRLE+ FPG Sbjct: 47 GKYSSSAGFKALIRGVVCSTLAVGTGDYICQQLEGSPSK---------DEPAPRPDSLGKQTAAQPLSPEPKAWDKERTLRMATATALVMSPMSWVIVMRLERVFPG 144
BLAST of NO23G01050 vs. NCBI_GenBank
Match: ACD54825.1 (integral membrane protein-like protein [Adineta vaga]) HSP 1 Score: 100.9 bits (250), Expect = 5.400e-18 Identity = 68/216 (31.48%), Postives = 108/216 (50.00%), Query Frame = 0 Query: 6 GAAAAIVGKRASSPGNKALFRGIVFSTLAVAT----GDYICQQLEGEDEDGREGEVLLGQEQLQLPQHQQPQIRATPISTTKKEWDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITALENHP--DARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMSKQVN 216 G A+ R++ G + L + + ST+ + T GD+ICQ L Q Q + QI ++ I WD++R+L M ++ V+AP ++ + +E FPG +LKK L N LAP I L F ++T L DA + ++ ++L T +G +WPFV+ +NF F+ L+ RP VG++AG W+IY+S N Sbjct: 4 GFINAVKFTRSTQHGWRNLIKPYLISTIGIGTSATVGDFICQYL---------------QRNKQNKSNVTTQISSSCILPW---WDRQRSLVMCISSTFVVAPWNFTVSRIIENLFPGKQGIQILKKMLTNTLLAPIGICLVFVSVTLLNGRSFHDAEI----KITNDLWKTFFTGTCYWPFVSFINFRFIPLDYRPFVGSLAGAIWNIYISSIAN 197
BLAST of NO23G01050 vs. NCBI_GenBank
Match: CBJ32920.1 (integral membrane protein-like protein [Ectocarpus siliculosus]) HSP 1 Score: 87.0 bits (214), Expect = 8.100e-14 Identity = 46/141 (32.62%), Postives = 76/141 (53.90%), Query Frame = 0 Query: 83 KKEWDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMSKQVNGKVKEGGK 224 K WD RT+RM A + P S+ M E+ PG S AV+ K + + P M++ F+++T LE + +++ + PTL + ++FWP V+++N FV + +RPV + GV W++Y+S Q N E G+ Sbjct: 9 KFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPMLAAQFASLTLLE-EGKTMGDVRTKLSRDFTPTLKNAILFWPVVSVINSAFVPVLSRPVFSSFVGVFWNVYISYQANHNGMEVGE 148
BLAST of NO23G01050 vs. NCBI_GenBank
Match: XP_014156628.1 (hypothetical protein SARC_04997 [Sphaeroforma arctica JP610] >KNC82726.1 hypothetical protein SARC_04997 [Sphaeroforma arctica JP610]) HSP 1 Score: 79.0 bits (193), Expect = 2.200e-11 Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 0 Query: 86 WDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMSKQ 214 +D RT MA A + P ++V E+ +PGNS AV+ K N +P +I+ S L + ++Q+++ + LPT +G+ FWP VNI+ + FV L+ R GA AG WS Y+S Q Sbjct: 50 YDYARTAAMALTGAAITGPLVHLMVASNERIYPGNSVRAVIVKASINLIWSPLLIAATLSGSMWLRG--KSNTEIKQKIDVDFLPTCVTGLGFWPPVNIVQYAFVPLKWRASAGACAGGIWSTYLSYQ 175
BLAST of NO23G01050 vs. NCBI_GenBank
Match: EFJ35351.1 (hypothetical protein SELMODRAFT_79996, partial [Selaginella moellendorffii]) HSP 1 Score: 77.0 bits (188), Expect = 8.400e-11 Identity = 40/126 (31.75%), Postives = 67/126 (53.17%), Query Frame = 0 Query: 86 WDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMS 212 WD RTLRM+A ++ PT + L K PG + LKK L + F +I AL + + QR+ +L+PTLASG+++WPF +++ F +V + +P+V + W++Y++ Sbjct: 65 WDHVRTLRMSAVGLLMSGPTLHLWFNFLNKILPGRDMISTLKKMLLGQTTYGPAFTATFFSINALAQGENG-AQIWQRLKRDLIPTLASGLMYWPFCDLITFRYVPVHLQPLVSNSFSLIWTVYLT 189
BLAST of NO23G01050 vs. NCBI_GenBank
Match: XP_024524304.1 (protein Mpv17 [Selaginella moellendorffii]) HSP 1 Score: 77.0 bits (188), Expect = 8.400e-11 Identity = 40/126 (31.75%), Postives = 67/126 (53.17%), Query Frame = 0 Query: 86 WDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMS 212 WD RTLRM+A ++ PT + L K PG + LKK L + F +I AL + + QR+ +L+PTLASG+++WPF +++ F +V + +P+V + W++Y++ Sbjct: 126 WDHVRTLRMSAVGLLMSGPTLHLWFNFLNKILPGRDMISTLKKMLLGQTTYGPAFTATFFSINALAQGENG-AQIWQRLKRDLIPTLASGLMYWPFCDLITFRYVPVHLQPLVSNSFSLIWTVYLT 250
BLAST of NO23G01050 vs. NCBI_GenBank
Match: EFJ10609.1 (hypothetical protein SELMODRAFT_127764, partial [Selaginella moellendorffii]) HSP 1 Score: 75.1 bits (183), Expect = 3.200e-10 Identity = 39/126 (30.95%), Postives = 66/126 (52.38%), Query Frame = 0 Query: 86 WDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMS 212 WD RTLRM+A ++ PT + L K PG + LKK L + F +I AL + + R+ +L+PTLASG+++WPF +++ F +V + +P+V + W++Y++ Sbjct: 65 WDHVRTLRMSAVGLLMSGPTLHLWFNFLNKILPGRDMISTLKKMLLGQTTYGPAFTATFFSINALAQGENG-AQIWHRLKRDLIPTLASGLMYWPFCDLITFRYVPVHLQPLVSNSFSLIWTVYLT 189
BLAST of NO23G01050 vs. NCBI_GenBank
Match: XP_024517761.1 (PXMP2/4 family protein 3 [Selaginella moellendorffii]) HSP 1 Score: 75.1 bits (183), Expect = 3.200e-10 Identity = 39/126 (30.95%), Postives = 66/126 (52.38%), Query Frame = 0 Query: 86 WDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMS 212 WD RTLRM+A ++ PT + L K PG + LKK L + F +I AL + + R+ +L+PTLASG+++WPF +++ F +V + +P+V + W++Y++ Sbjct: 123 WDHVRTLRMSAVGLLMSGPTLHLWFNFLNKILPGRDMISTLKKMLLGQTTYGPAFTATFFSINALAQGENG-AQIWHRLKRDLIPTLASGLMYWPFCDLITFRYVPVHLQPLVSNSFSLIWTVYLT 247
BLAST of NO23G01050 vs. NCBI_GenBank
Match: XP_021846420.1 (protein SYM1-like [Spinacia oleracea]) HSP 1 Score: 74.7 bits (182), Expect = 4.200e-10 Identity = 39/127 (30.71%), Postives = 66/127 (51.97%), Query Frame = 0 Query: 86 WDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKK-TLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMS 212 +D RTLR+A ++M P+ + L + FPG +KK + P M S+ FS AL+ + R + R+ +LLPTL G+++WP + L F F+ + +P+V + W+IY++ Sbjct: 130 FDSVRTLRIAGYGLLIMGPSQHLWFNFLSRVFPGRDVFTTVKKIVMGQSIYGPIMNSIFFSYNAALQG--ETREEVVARLKRDLLPTLMKGLMYWPLCDFLTFKFIPVHLQPLVNSSFAYLWTIYLT 254
BLAST of NO23G01050 vs. NCBI_GenBank
Match: PNX78396.1 (PXMP2/4 family protein 4-like, partial [Trifolium pratense]) HSP 1 Score: 74.3 bits (181), Expect = 5.500e-10 Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 0 Query: 82 TKKEWDKERTLRMAAATAVVMAPTSWMIVMRLEKFFPGNSTAAVLKK-TLANGCLAPFMISLHFSTITALENHPDARVHLEQRMNHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGAMAGVAWSIYMS 212 + K D RTLRMA +++ PT + K FPG + LKK + P M + FS AL+ D + R+ +L+PTL +GV++WP + + F F+ + +P+V W+IYM+ Sbjct: 28 SSKSLDFIRTLRMAGYGMIILGPTLHFWFNFVSKLFPGRDLFSTLKKMVMGQSIYGPAMTVIFFSLNAALQGENDKEI--VARLKRDLVPTLLNGVMYWPICDFITFRFIPVHLQPLVSNSFSYLWTIYMT 156 The following BLAST results are available for this feature:
BLAST of NO23G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G01050 ID=NO23G01050|Name=NO23G01050|organism=Nannochloropsis oceanica|type=gene|length=1635bpback to top protein sequence of NO23G01050.1 >NO23G01050.1-protein ID=NO23G01050.1-protein|Name=NO23G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=232bpback to top Synonyms
Publications
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