NO23G00960, NO23G00960 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO23G00960
Unique Name	NO23G00960
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4123
Alignment location	chr23:360023..364145 +

Link to JBrowse

Properties


Property Name	Value
Description	Dna-binding protein smubp-2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr23	genome	chr23:360023..364145 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014001	Helicase_ATP-bd

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Homology

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BLAST of NO23G00960 vs. NCBI_GenBank
Match: EWM22944.1 (dna-binding protein smubp-2 [Nannochloropsis gaditana])

HSP 1 Score: 770.4 bits (1988), Expect = 8.900e-219
Identity = 474/791 (59.92%), Postives = 567/791 (71.68%), Query Frame = 0

Query:   51 LAQLTPQECQEKGVSLLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGE-ISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHT-LPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYVPEWG 840
            LAQLTPQECQEKGVSLL+LNI G STGLY R CISLG S A+RKDG LPAHGF +GDEVVLRSMKGSS+                      G E I+GV+ R T  +++ VAS +++D +LLE WAA GPGSGHLRLDML+NE+TH+KM++A++ +  YP+DGPAAR+++MCFG RA L +LP    T+ T LP  G  + SGA LN+ QRAA+ +G++T+DVALIHGPPGTGKTTAVVELILQAV R +RR+LVCAPSNVAVDN+ ER+      XXXXXXXXXXXXXXXXXXX     +P RIVRLGHPARL+PAT AYSLEAL+  ADGT++V DIRAE++ALER+  S +  +L++ +  WR E R L++E+R RE  VV +V+ SR++VLCTCVGA  R+L EE FD+VVIDEAAQ+LEAACWIP+ +G RVVLAGDHKQL PT+KS +A+ +GL VTLFDRLM  ++ F  P+                                  GGR  ML VQYRMHA+IC WAS+AMY G L  D SVA RTLAGL +G +E                           XXXXXX                     XXXX XXXXXXXXXXXXXXXX KT+R RSLLSSSR+NEGEA VV+AHV AL+R T + P ++A+ITPYNAQVE LRSLLHP +P L++RSVDGFQGGEREAVVLSLVRSN RGEVGFL++DRRLNVAVTRAKRH C+VGDSETVGRHPFL  LL+  EE G++RSA+EY+PEWG
Sbjct:   42 LAQLTPQECQEKGVSLLHLNIAGISTGLYARKCISLGASTAVRKDGSLPAHGFGAGDEVVLRSMKGSSSKGS--------------GAGATGSERITGVIARTTGGRVDMVASTEDLDSDLLEGWAAGGPGSGHLRLDMLSNESTHEKMLQAVEDVCNYPADGPAARIIDMCFGGRACLGTLPPVPKTAPTQLPPDGPSY-SGAVLNDAQRAAVTLGMSTEDVALIHGPPGTGKTTAVVELILQAVRRQQRRVLVCAPSNVAVDNIAERL-----AXXXXXXXXXXXXXXXXXXXTELSKRPVRIVRLGHPARLAPATQAYSLEALVEGADGTALVRDIRAELAALERRGVSPKTPQLREARRQWRSETRALRRELRTREARVVGEVVSSREVVLCTCVGAGARVLREERFDLVVIDEAAQALEAACWIPIQRGGRVVLAGDHKQLAPTVKSGRAEALGLGVTLFDRLMR-EDGFGGPA----------------------------------GGRACMLQVQYRMHADICAWASRAMYQGRLRADPSVAGRTLAGLGKGERED------------------------GEXXXXXXMTEAVLLFLDTAGCGMEEEEGXXXXXXXXXXXXXXXXXXXXXXKTVRARSLLSSSRANEGEAQVVAAHVQALLRRTGLAPADVAVITPYNAQVERLRSLLHPQYPDLQVRSVDGFQGGEREAVVLSLVRSNLRGEVGFLRDDRRLNVAVTRAKRHCCLVGDSETVGRHPFLASLLQHCEEVGQIRSAMEYLPEWG 753

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BLAST of NO23G00960 vs. NCBI_GenBank
Match: CBJ28050.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 443.4 bits (1139), Expect = 2.500e-120
Identity = 388/812 (47.78%), Postives = 468/812 (57.64%), Query Frame = 0

Query:   53 QLTPQECQEKGVSLLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGT-RWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVER-IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISAL------ERKKFSSRGFRLKQEKSAWRQEMRGLKK------EMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEG-------------GRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYVPE 838
            QLT QEC E+GVSL+ L + G STGLYGR C+S+G      K   LPAH   +GD+V L S KG     +                     EISGVV ++T   +E +  +++ D+        AG     LRLD++A+EATH+K+M  +D L  YP  GPA R++N+ FGS       PS    + T P + T   L+   LN+ QR A+A  LAT DVALIHGPPGTGKTT VV L+ +AV R   R LVCAPSNVAVD M+E+ +XXXXXXXXXXXXXXXXXXXXXXXXXX      PR+VR+GHPARL P  L +S+EAL++  +GT+IV D+R +I  L      E                     +RG  +      E R RE  VV++VL+SRD+VL TCVGAAT  L EE FD+VVIDEAAQ+LEAACWIP+LKG R+VLAGDHKQL PT+KSRKA+   L  +         EA   P    P+           XXXXXXXXXXXXXXXXX               G  RML VQYRM+ +IC WAS  MY G L+   SVA R L  L                                                  XXXXXXXXXXXXXX XXXXXXXXXXXXXXXX                E EA V   HV  L+ +  V   E+A+I+PYN QV LL+ LL P  P +E+RSVDGFQGGE+EA+VLSLVRSN   +VGFL + RRLNVAVTRAKRHV +V D+E  G  PF+  LL  +E++GE RSALE  PE
Sbjct:   46 QLTAQECMERGVSLVPLAVTGLSTGLYGRACVSVGDP----KGRPLPAHRLGAGDQVRLYSSKGGKGDVEGGI-----------------SEISGVVGKVTEGTVEVI--SEDADD--------AGSLRAPLRLDVVASEATHKKLMLGLDALEKYPGGGPAERVINVLFGSEP-----PSAAAVAPTGPPAATLSSLALRSLNDSQREAVAFALATRDVALIHGPPGTGKTTTVVALVQEAVAR-GWRCLVCAPSNVAVDGMLEKLVXXXXXXXXXXXXXXXXXXXXXXXXXXKNIGGRPRVVRMGHPARLLPQVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLHGESXXXXXXXXXXXXXXXXXXXRIRGADRKGARMEEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPS---------EAVSVPPPHAPARSPGAHGGNSKXXXXXXXXXXXXXXXXXXXXXMFDRVLRDLGHGVCRMLNVQYRMNRDICDWASGEMYGGLLLAHPSVAERELPDLPH-----------------------------------------------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREAEVAVRHVKGLL-NAGVRESEVAVISPYNGQVNLLKRLLRPEHPGVEVRSVDGFQGGEKEAIVLSLVRSNAGKKVGFLADARRLNVAVTRAKRHVAIVCDAECCGSDPFIGRLLRHVEDRGEYRSALELTPE 763

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BLAST of NO23G00960 vs. NCBI_GenBank
Match: XP_008603812.1 (hypothetical protein SDRG_00126 [Saprolegnia diclina VS20] >EQC42389.1 hypothetical protein SDRG_00126 [Saprolegnia diclina VS20])

HSP 1 Score: 430.6 bits (1106), Expect = 1.700e-116
Identity = 293/772 (37.95%), Postives = 392/772 (50.78%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFV-ASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPP-RIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYV 836
            LL+L +   +TGL+GRT + L       ++ +LP+H F  GD V L     S T +                     G   G+VT++    +       D  DE   ++          LRLD L N+AT++K+ + ID L  Y +DGPA  ++N+ F          SP   S               +N  Q  AI   LA+ D+ALIHGPPGTGKTT VVELI Q V +HK ++LVCAPSN+AVDN++E++                              KP  R+ R+GHPARL P  L Y L+A IA+ADGT+I++DIR E+ AL+ K   +R  R K    A R+E + L+KE+R RE  VVR++++  D++  T  GAAT+LL    FD+V+IDEAAQ+LEA+CWIP+L G R VLAGDH QLPPTIKS  A +  +  TLFDR+  +++                                         G  +ML+ QYRMH  I  W+S AMY G L    +VA+R L  L+     +E                                                                                  L  S+SN GEA VV+AHVHAL+ +  + P+EIA+ITPYNAQV+LL+ LL P  P+LEIRSVDGFQG E+EAVV+SLVRSN + +VGFL +DRR+NVA+TRAKRHV +V D++T+G+HPFL  L+E  E  GE RSA EY+
Sbjct:   45 LLHLRLASATTGLFGRTVLLLTQG----QNRELPSHHFGIGDLVQLSVPTASPTPA-----------------DANDGLPRGIVTKVEEHAISIAFEDLDNADEYHNQA----------LRLDRLVNDATYRKLHEGIDRLAKY-NDGPAMNILNVVFHGGEPQTKPISPFTPS-------------TPMNASQIDAIEYALASKDIALIHGPPGTGKTTTVVELITQCVSQHKMKILVCAPSNIAVDNVLEKV---------------------------AATKPKFRVTRIGHPARLLPQVLQYCLDARIASADGTAIIADIRKEMGALQTKMAKARKQRAKASVYAMRKECQLLRKEIRDRERKVVREIVEHSDVLFATNAGAATKLLANLVFDVVIIDEAAQALEASCWIPLLMGKRCVLAGDHLQLPPTIKSDVAARAHM--TLFDRITRMEKT---------------------------------------KGVVKMLSTQYRMHEAISSWSSHAMYDGKLASSDAVATRKLGDLAHVTHTTELTAPTLLLLDTAGCGLDEDVDDAP------------------------------------------------------THEALRISKSNAGEADVVAAHVHALL-NIGLRPDEIAVITPYNAQVQLLKRLLLPTLPTLEIRSVDGFQGCEKEAVVMSLVRSNAKKQVGFLADDRRMNVAITRAKRHVALVCDTDTIGKHPFLHALMEHFEAHGEYRSAEEYL 648

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BLAST of NO23G00960 vs. NCBI_GenBank
Match: XP_008603813.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC42390.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 430.6 bits (1106), Expect = 1.700e-116
Identity = 293/772 (37.95%), Postives = 392/772 (50.78%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFV-ASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPP-RIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYV 836
            LL+L +   +TGL+GRT + L       ++ +LP+H F  GD V L     S T +                     G   G+VT++    +       D  DE   ++          LRLD L N+AT++K+ + ID L  Y +DGPA  ++N+ F          SP   S               +N  Q  AI   LA+ D+ALIHGPPGTGKTT VVELI Q V +HK ++LVCAPSN+AVDN++E++                              KP  R+ R+GHPARL P  L Y L+A IA+ADGT+I++DIR E+ AL+ K   +R  R K    A R+E + L+KE+R RE  VVR++++  D++  T  GAAT+LL    FD+V+IDEAAQ+LEA+CWIP+L G R VLAGDH QLPPTIKS  A +  +  TLFDR+  +++                                         G  +ML+ QYRMH  I  W+S AMY G L    +VA+R L  L+     +E                                                                                  L  S+SN GEA VV+AHVHAL+ +  + P+EIA+ITPYNAQV+LL+ LL P  P+LEIRSVDGFQG E+EAVV+SLVRSN + +VGFL +DRR+NVA+TRAKRHV +V D++T+G+HPFL  L+E  E  GE RSA EY+
Sbjct:   45 LLHLRLASATTGLFGRTVLLLTQG----QNRELPSHHFGIGDLVQLSVPTASPTPA-----------------DANDGLPRGIVTKVEEHAISIAFEDLDNADEYHNQA----------LRLDRLVNDATYRKLHEGIDRLAKY-NDGPAMNILNVVFHGGEPQTKPISPFTPS-------------TPMNASQIDAIEYALASKDIALIHGPPGTGKTTTVVELITQCVSQHKMKILVCAPSNIAVDNVLEKV---------------------------AATKPKFRVTRIGHPARLLPQVLQYCLDARIASADGTAIIADIRKEMGALQTKMAKARKQRAKASVYAMRKECQLLRKEIRDRERKVVREIVEHSDVLFATNAGAATKLLANLVFDVVIIDEAAQALEASCWIPLLMGKRCVLAGDHLQLPPTIKSDVAARAHM--TLFDRITRMEKT---------------------------------------KGVVKMLSTQYRMHEAISSWSSHAMYDGKLASSDAVATRKLGDLAHVTHTTELTAPTLLLLDTAGCGLDEDVDDAP------------------------------------------------------THEALRISKSNAGEADVVAAHVHALL-NIGLRPDEIAVITPYNAQVQLLKRLLLPTLPTLEIRSVDGFQGCEKEAVVMSLVRSNAKKQVGFLADDRRMNVAITRAKRHVALVCDTDTIGKHPFLHALMEHFEAHGEYRSAEEYL 648

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BLAST of NO23G00960 vs. NCBI_GenBank
Match: XP_009841853.1 (hypothetical protein H257_15438 [Aphanomyces astaci] >ETV68628.1 hypothetical protein H257_15438 [Aphanomyces astaci])

HSP 1 Score: 424.9 bits (1091), Expect = 9.200e-115
Identity = 294/769 (38.23%), Postives = 389/769 (50.59%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEY 835
            LL L +   STGL+GRT + L  +       +  AH FS GD V +     S T +                     G   G+VT++  + +  VA  D  D +        G  +  +RLD L N+AT++K+  A+D L  + SDGPA  +VN+ F   A+  S P P +   T P S         +N  Q  AI   LA+ DVALIHGPPGTGKTT +VE I Q V  +K ++LVCAPSNVAVDN++ ++                                 R+ R+GHPARL PA L Y L+A IA A+GT I++DIR E+  L+  K + +           RQE + L+KE+R RE+ VV D+++  D+V  T  GAAT+LL    FD+VVIDEAAQ+LEA+CWIP+L+  R VLAGDH QLPPTI+S  A + GL +TLFDR+  ++ +                                           RML+ QYRMH  I  W+SKAMYA  L    SVASR L+ L       +                                                                               ++LL +S+SN GEA VV+ HV AL+  T + P E+A+ITPYN QV +LR LLHP+ P+LEIRSVDGFQG E+EAVV+SLVRSN +  VGFL +DRR+NVAVTRAKRHV ++GD++T+G HPFLK L++  E  GE +SA EY
Sbjct:   45 LLRLFMTSASTGLFGRTVLVLKHN----HGREFGAHHFSVGDLVSMCIPTASLTPTN------------------ADGFPKGIVTKVDDNSIS-VAFEDLEDSD--------GYHNEPIRLDRLVNDATYRKLNDALDELAKF-SDGPAQHIVNVIFHG-AAPTSNPLPAILDVTNPPS--------SMNASQVDAIQFALASKDVALIHGPPGTGKTTTLVEFIRQCVRTYKMKVLVCAPSNVAVDNILAKMAAAESAKRRKAGL--------------------RMTRVGHPARLLPAVLKYCLDAKIAAAEGTQIIADIRKELGTLKATKATFQNV---------RQERKALRKEIREREQNVVADIIQHSDVVFATNAGAATKLLRNVVFDVVVIDEAAQALEASCWIPLLRARRCVLAGDHHQLPPTIQSESAKRQGLGLTLFDRVTQMEHSKCV---------------------------------------VRMLSTQYRMHRAISDWSSKAMYASQLASCDSVASRKLSHLPHVTIPHDNDALDATLLLIDTAGCGLDEESDEGGGGV--------------------------------------------------QTLLGASKSNPGEAQVVAQHVTALLA-TGLKPSEVAVITPYNGQVGVLRRLLHPVHPTLEIRSVDGFQGCEKEAVVMSLVRSNCKNAVGFLADDRRMNVAVTRAKRHVALIGDTDTLGNHPFLKTLIDHFELHGECQSAQEY 653

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BLAST of NO23G00960 vs. NCBI_GenBank
Match: XP_002906045.1 (DNA polymerase alpha-associated DNA helicase A, putative [Phytophthora infestans T30-4] >EEY67397.1 DNA polymerase alpha-associated DNA helicase A, putative [Phytophthora infestans T30-4])

HSP 1 Score: 424.5 bits (1090), Expect = 1.200e-114
Identity = 287/773 (37.13%), Postives = 397/773 (51.36%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLG-PSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYVPE 838
            L +L +   STGL+GRT +    PS++LR   +   H F+ GD V +R+ K + T +K                       +G+V+R+    +    ++D+ D + +E   A    +  + LD L N AT  K+  A+D +  +   G A  +V++ F  R    + P P +T                LNE Q  A+   LA+ D+ALIHGPPGTGKTT VVE ILQAV R   ++LVCAPSN+AVDN+++++                              K  ++ R+GHPAR+ P  L Y L+A I +A+GT IV+DIR E+S++++K   +R    K E+   R+EM+  +KE+R RE+ VV D+++  D+V  T VGAA++LL + TFD+V+IDEAAQ+LEA+CWIPMLK  R VLAGDH QLPPTIKSR A   GL VTLFDR+     ++    S++                                   +ML  QYRMH +I  W+S+AMY G L     VA R L  L       E                                                                         +   +  S L  S+SNEGEA VV+ HV AL++   +  EE+A+ITPYN QV+ L++LL   +P LEIRSVDGFQG E+EAVV+SLVRSN   +VGFL +DRR+NVA+TRAKRHV VV D++T+  H FL GL++  E+ GE RSA EY+ E
Sbjct:   60 LTHLTLARYSTGLFGRTLLQFSFPSLSLR---QAKPHQFTVGDLVQIRAQKNTLTGAKLP---------------------TGIVSRVEERGISVAVNSDQEDVDEVELLTA----TAGVTLDRLVNNATFLKLTSALDQMTKF-EFGAAQTVVDVVFSEREPSWNTPLPDITPF-----------NTGLNESQVEAVRFALASKDLALIHGPPGTGKTTTVVEFILQAVTRFDLKVLVCAPSNIAVDNVLDKL----------------------ASTCSTLRKKLKLTRIGHPARVLPQILNYCLDAKIESAEGTEIVNDIRQEMSSMQKKLQKTRD---KSERYRLRREMKANRKEIRTREQKVVGDIIRHSDVVFATNVGAASKLLKDVTFDLVIIDEAAQALEASCWIPMLKAKRCVLAGDHLQLPPTIKSRAAAAKGLEVTLFDRV----TSYTNTQSIV-----------------------------------KMLDTQYRMHQDISEWSSQAMYKGELKSFEGVARRKLHELPHVSISKE---------------------------------------------------DELLDATLLLLDTAGCELEEDAKDEEKASSTLQLSKSNEGEAHVVARHVSALLK-AGLKEEEVAVITPYNKQVQTLKALLLESYPKLEIRSVDGFQGCEKEAVVMSLVRSNASRQVGFLADDRRMNVAITRAKRHVAVVCDTDTISSHKFLSGLVKHFEKYGEYRSAQEYLDE 676

[Close]

BLAST of NO23G00960 vs. NCBI_GenBank
Match: XP_008863348.1 (hypothetical protein H310_01819 [Aphanomyces invadans] >ETW07255.1 hypothetical protein H310_01819 [Aphanomyces invadans])

HSP 1 Score: 417.9 bits (1073), Expect = 1.100e-112
Identity = 282/771 (36.58%), Postives = 398/771 (51.62%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCF-GSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYV 836
            LL+L +   STGL+GR  + L  +    +  +  AH F+ GD V +     S T +                     G   G+VT++  + +        V  E LE   A    S  +RLD L N+AT++K+M+ +D+L  Y +DGPA  +V++ F G+  S   LPS  ++              + +N  Q  AI   L + D+A+IHGPPGTGKTT +VE I   V +++ ++LVCAPSN+AVDN+++++                                 R+ RLGHPARL P  L + L++ I +A+GT I++DIR E++ L+  K +           A RQE + L+KE+RVREE VV ++++  D+V  T  GAAT+LL    FD+VVIDEAAQ+LEA+CWIP+L G R VLAGDH QLPPTI+S +A + GL +TLFDR+  ++ +                                        G  RML+ QYRMH +I  W+SKAMYA  L    SVA+R L+ L+    ES+                                                                          ++     +L +S+SN+GEALV   HV AL+  T + P E+A+ITPYN QV +L+ LLHP  P++EIRSVDGFQG E+EAVV+SLVRSN   +VGFL +DRR+NVA+TRAKRHV ++ D++T+ +HPFLK L++  EE GE RSA EY+
Sbjct:   44 LLHLLMTSASTGLFGRRVLVLKHN----QGREFGAHHFNVGDLVSMCIPTASLTPAN------------------ADGFPKGIVTKVEDNSI-------AVAFEELEDTDAYHNES--IRLDRLVNDATYRKLMEGLDVLAKY-TDGPARHIVDVIFHGAAPSSSPLPSIDLSRR------------STMNPSQVGAIQFALESKDIAMIHGPPGTGKTTTLVEFITLCVQQYQMKVLVCAPSNIAVDNILDKMASAQASKKSGKL---------------------RMTRLGHPARLLPHVLKHCLDSKIQSAEGTQIIADIRKELAGLKPSKATFH---------AVRQERKALRKEIRVREEKVVSEIIEHSDVVFATNAGAATKLLRNVVFDVVVIDEAAQALEASCWIPLLLGKRCVLAGDHHQLPPTIQSEQAARKGLGLTLFDRVTQMEHS---------------------------------------KGVVRMLSTQYRMHHDISSWSSKAMYANQLASCDSVATRKLSDLAHVNIESD--------------------------------------------------------ALDATLLLVDTAGCGLDEESEEGSGILKASKSNQGEALVAVQHVKALLA-TGLRPSEVAVITPYNGQVGVLKRLLHPDHPTVEIRSVDGFQGCEKEAVVMSLVRSNATKQVGFLADDRRMNVAITRAKRHVALICDTDTLSKHPFLKALIDHFEEHGECRSAHEYL 644

[Close]

BLAST of NO23G00960 vs. NCBI_GenBank
Match: OQR91885.1 (DNA polymerase alpha-associated DNA helicase A [Achlya hypogyna])

HSP 1 Score: 416.8 bits (1070), Expect = 2.500e-112
Identity = 292/771 (37.87%), Postives = 391/771 (50.71%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPP-RIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYV 836
            LL L +   STGL+GRT + L        + +LP+H F  GD V L     S T +                     G   G+VT++    +  VA  D  D +   + A        LRLD L N+AT++K+ + ID L  Y SDGPA  ++N+ F       +   P VTS             A +N  Q  AI   LA+ D+ALIHGPPGTGKTT VVE I Q V +HK ++LV APSN+AVDN++E++                              KP  R+ R+GHPARL P  L Y L+A IA A+GT+I++DIR E++ L+ K   +R  R K      R+E + L+KE+R RE  VVR++++  D++  T  GAAT+LL++  FD+VVIDEAAQ+LEA+CWIP+L G R VLAGDH QLPPTIKS  A ++ +  TLFDR+  ++                                          G  +ML+ QYRMHA I  W+S AMY G L    +VA R L+ L      +E                                                        P                  T  P ++L  S+SN GEA VV AHV AL+    + P ++A+ITPYNAQV+LL+ +L    P++EIRSVDGFQG E+EAVV+SLVRSN + +VGFL +DRR+NVA+TRAKRHV +V DS+T+  HPFLK L+   E  G+ RSA EY+
Sbjct:   45 LLNLQLASASTGLFGRTVLVLKQG----HNRELPSHHFGIGDLVQLSIPTASLTPA------------------AADGFPKGIVTKVEDHAIS-VAFEDMEDADEYHNVA--------LRLDKLVNDATYRKLHEGIDRLAKY-SDGPAMNILNVVFHGGQPQTNPRQPLVTS-------------APMNPSQVEAIEYALASKDIALIHGPPGTGKTTTVVEFIAQCVTKHKMKVLVTAPSNIAVDNVLEKV---------------------------AATKPKFRVTRIGHPARLLPQVLQYCLDARIAAAEGTAIIADIRKEMAQLQAKMAKARKQRAKTGVYELRKECQLLRKEVRDRERKVVREIIEHSDVIFATNAGAATKLLSDMVFDVVVIDEAAQALEASCWIPLLMGKRCVLAGDHLQLPPTIKSDAAARVHM--TLFDRIAKMETT---------------------------------------KGVVKMLSTQYRMHAAISDWSSAAMYDGKLASAEAVARRRLSDLPHVTTTTE-----------------------------------------------------LTEPTLLLLDTAGCGLEEDVDDTTGPAAVLQLSKSNAGEADVVVAHVKALL-GIGLRPSDVAVITPYNAQVQLLKRMLSAEHPAVEIRSVDGFQGCEKEAVVMSLVRSNVKKQVGFLADDRRMNVAITRAKRHVALVCDSDTISAHPFLKALVAHFEAHGDYRSADEYM 648

[Close]

BLAST of NO23G00960 vs. NCBI_GenBank
Match: XP_008900049.1 (hypothetical protein PPTG_07525 [Phytophthora parasitica INRA-310] >ETN14479.1 hypothetical protein PPTG_07525 [Phytophthora parasitica INRA-310])

HSP 1 Score: 412.5 bits (1059), Expect = 4.700e-111
Identity = 285/773 (36.87%), Postives = 392/773 (50.71%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLG-PSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYVPE 838
            L +L +   STGL+GRT +    PS++LR   +   H F+ GD V +R  K + T  K                       +G+V+R+    +    ++D+ D + +E  AA G     + LD L N AT  K+  A+D +  +   G A  +V++ F  R    + P P +T                LNE Q  AI + LA+ D+ALIHGPPGTGKTT VVE ILQAV R   ++LVCAPSN+AVDN+++++                              K  ++ R+GHPAR+ P  L Y L+A I +A+GT IV+DIR E++A+++K   +R   L+ +    R+EM+  +KE+R RE+ VV D+++  ++V  T VGAA++LL + TFD+V+IDEAAQ+LEA+CWIP+LK  R VLAGDH QLPPTIKS+ A   GL VTLFDR+     A +T +  I                                   +ML  QYRMH +I  W+S+AMY G L     VA R L  L       E                                                                                  +  S+SNEGEA VV+ HV AL+ +  +  EE+A+ITPYN QV+ L++LL    P LEIRSVDGFQG E+EAVV+SLVRSN   +VGFL +DRR+NVA+TRAKRHV VV D++T+  H FL  L++  E+ GE RSA EY+ E
Sbjct:   60 LTHLTLSRCSTGLFGRTLLQFSFPSLSLR---QAKPHQFTVGDLVQIRVQKNTPTGGKLP---------------------TGIVSRVEERGISVAVNSDQEDVDEVELLAATG-----ITLDRLVNNATFLKLTSALDQMTKF-EFGAAQAVVDVVFSEREPSWNTPLPDITPF-----------NKGLNESQVEAIRLALASKDLALIHGPPGTGKTTTVVEFILQAVTRFDLKVLVCAPSNIAVDNVLDKL----------------------ASTCSTLGKTLKLTRIGHPARVLPQILKYCLDAKIESAEGTEIVNDIRQEMTAMQKKLQKTRDKSLRYQ---LRREMKTNRKEIRTREQKVVGDIVRHSNVVFATNVGAASKLLKDVTFDLVIIDEAAQALEASCWIPILKAKRCVLAGDHLQLPPTIKSKTAAAKGLEVTLFDRI-----ASYTNTQSI----------------------------------VKMLDTQYRMHEDISEWSSQAMYKGELKSFEGVAKRKLHELPHVSISKEDELLSATLLLLDTAGCELEEDSNDD-----------------------------------------------------ETGSMQLSKSNEGEARVVARHVSALL-EAGLKEEEVAVITPYNKQVQTLKALLLESHPKLEIRSVDGFQGCEKEAVVMSLVRSNASRQVGFLADDRRMNVAITRAKRHVAVVCDTDTISSHKFLAVLVKHFEKFGEYRSAQEYLDE 673

[Close]

BLAST of NO23G00960 vs. NCBI_GenBank
Match: KUF76437.1 (DNA-binding protein SMUBP-2 [Phytophthora nicotianae])

HSP 1 Score: 412.5 bits (1059), Expect = 4.700e-111
Identity = 285/773 (36.87%), Postives = 392/773 (50.71%), Query Frame = 0

Query:   66 LLYLNIIGTSTGLYGRTCISLG-PSIALRKDGKLPAHGFSSGDEVVLRSMKGSSTSSKXXXXXXXXXXXXXXXXXXXGGEISGVVTRITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMKAIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLSGAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRRLLVCAPSNVAVDNMVERIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPPRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFSSRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAATRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKSRKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASRTLAGLSEGGKESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXRKTIRPRSLLSSSRSNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPSLEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHVCVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYVPE 838
            L +L +   STGL+GRT +    PS++LR   +   H F+ GD V +R  K + T  K                       +G+V+R+    +    ++D+ D + +E  AA G     + LD L N AT  K+  A+D +  +   G A  +V++ F  R    + P P +T                LNE Q  AI + LA+ D+ALIHGPPGTGKTT VVE ILQAV R   ++LVCAPSN+AVDN+++++                              K  ++ R+GHPAR+ P  L Y L+A I +A+GT IV+DIR E++A+++K   +R   L+ +    R+EM+  +KE+R RE+ VV D+++  ++V  T VGAA++LL + TFD+V+IDEAAQ+LEA+CWIP+LK  R VLAGDH QLPPTIKS+ A   GL VTLFDR+     A +T +  I                                   +ML  QYRMH +I  W+S+AMY G L     VA R L  L       E                                                                                  +  S+SNEGEA VV+ HV AL+ +  +  EE+A+ITPYN QV+ L++LL    P LEIRSVDGFQG E+EAVV+SLVRSN   +VGFL +DRR+NVA+TRAKRHV VV D++T+  H FL  L++  E+ GE RSA EY+ E
Sbjct:   53 LTHLTLSRCSTGLFGRTLLQFSFPSLSLR---QAKPHQFTVGDLVQIRVQKNTPTGGKLP---------------------TGIVSRVEERGISVAVNSDQEDVDEVELLAATG-----ITLDRLVNNATFLKLTSALDQMTKF-EFGAAQAVVDVVFSEREPSWNTPLPDITPF-----------NKGLNESQVEAIRLALASKDLALIHGPPGTGKTTTVVEFILQAVTRFDLKVLVCAPSNIAVDNVLDKL----------------------ASTCSTLGKTLKLTRIGHPARVLPQILKYCLDAKIESAEGTEIVNDIRQEMTAMQKKLQKTRDKSLRYQ---LRREMKTNRKEIRTREQKVVGDIVRHSNVVFATNVGAASKLLKDVTFDLVIIDEAAQALEASCWIPILKAKRCVLAGDHLQLPPTIKSKTAAAKGLEVTLFDRI-----ASYTNTQSI----------------------------------VKMLDTQYRMHEDISEWSSQAMYKGELKSFEGVAKRKLHELPHVSISKEDELLSATLLLLDTAGCELEEDSNDD-----------------------------------------------------ETGSMQLSKSNEGEARVVARHVSALL-EAGLKEEEVAVITPYNKQVQTLKALLLESHPKLEIRSVDGFQGCEKEAVVMSLVRSNASRQVGFLADDRRMNVAITRAKRHVAVVCDTDTISSHKFLAVLVKHFEKFGEYRSAQEYLDE 666

The following BLAST results are available for this feature:

BLAST of NO23G00960 vs. NCBI_GenBank

BLAST of NO23G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM22944.1	8.900e-219	59.92	dna-binding protein smubp-2 [Nannochloropsis gadit...	[more]
CBJ28050.1	2.500e-120	47.78	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_008603812.1	1.700e-116	37.95	hypothetical protein SDRG_00126 [Saprolegnia dicli...	[more]
XP_008603813.1	1.700e-116	37.95	hypothetical protein, variant [Saprolegnia diclina...	[more]
XP_009841853.1	9.200e-115	38.23	hypothetical protein H257_15438 [Aphanomyces astac...	[more]
XP_002906045.1	1.200e-114	37.13	DNA polymerase alpha-associated DNA helicase A, pu...	[more]
XP_008863348.1	1.100e-112	36.58	hypothetical protein H310_01819 [Aphanomyces invad...	[more]
OQR91885.1	2.500e-112	37.87	DNA polymerase alpha-associated DNA helicase A [Ac...	[more]
XP_008900049.1	4.700e-111	36.87	hypothetical protein PPTG_07525 [Phytophthora para...	[more]
KUF76437.1	4.700e-111	36.87	DNA-binding protein SMUBP-2 [Phytophthora nicotian...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL034	nonsL034	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR039	ncniR039	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR047	ngnoR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK006350	NSK006350	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO23G00960.1	NO23G00960.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|602077	gene_8448	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100184g6	gene7505	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO23G00960.1	NO23G00960.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO23G00960 ID=NO23G00960|Name=NO23G00960|organism=Nannochloropsis oceanica|type=gene|length=4123bp
ACAACAGAAAGGAAGGAGAAAGAGCGGGCGTCTCTGCTCTCTGCTATTGC
CAGCCACTTTGGTTTGTCGCAGTAGGTCTGTACGGGCCCGGCAAGGCACA
CTCTCCTCTCCACCGCCCTTCACAATCATGGACGGCGAGGCCACGACCAA
GCCCGCAAGTAGCAGTACTAGCAGCGGCAAGAGGAAGTCTCCTCCCACCG
TCGAAGCCTGGGTGACGCAACAAAAAGCCGCCCTCCTAGAAGAACGGGAA
GAAGAAAAGCAAGAGGTCACGGCGGCCCTCGCGCAACTCACCCCTCAAGA
ATGTCAGGAAAAAGGCGTCTCCCTCCTCTACCTCAACATCATCGGGACCA
GCACGGGCCTTTACGGACGCACCTGTATCAGCCTAGGTCCCTCCATAGCC
CTAAGAAAAGACGGAAAGCTACCTGCACATGGCTTTAGCAGCGGAGATGA
GGTAGTACTCCGGTCGATGAAAGGCAGCAGTACCAGTAGCAAGAGCAGCA
CCGGCAATTTAAGCAACAGCGGCAAGAGCAGCAGCAGTTTTATTAACGGT
GGAGGAGAAATATCAGGCGTAGTCACCAGGATCACGGCCAGCAAACTCGA
GTTTGTGGCCTCCGCGGACGAGGTAGACGAGGAACTCCTCGAAAGCTGGG
CAGCCGCTGGCCCGGGGAGTGGACACCTCCGTCTGGACATGCTGGCAAAC
GAGGCCACGCACCAGAAAATGATGAAAGCCATCGACATCCTCCTTGCCTA
CCCCTCCGATGGGCCTGCTGCTCGCCTGGTCAATATGTGCTTTGGAAGTC
GGGCTTCTCTCTGCTCCCTTCCTTCGCCCCATGTCACCTCGCACACCCTC
CCCTCCTCCGGCACCCGCTGGCTGTCCGGTGCTGAGTTAAACGAAGACCA
ACGCGCCGCGATCGCCATAGGACTAGCGACGGACGATGTCGCCCTCATTC
ATGGTCCTCCAGGAACAGGGAAGACCACGGCAGTGGTGGAATTGATCCTA
CAGGCTGTGCATCGGCACAAGAGGAGACTCTTGGTCTGTGCGCCCTCGAA
TGTGGCAGTCGATAACATGGTGGAACGCATTGCAGCTGCCACTTCTCAGA
GCAGTAGTAGTAGTAGTAGTAGTAGTGGTAGCAGCAGCAGAGCCTCGTCC
TCTCTTTACTCGTCTTCATTCAAGCCCCCCCGCATTGTCCGCCTCGGCCA
TCCCGCCCGTCTATCGCCCGCAACCCTCGCCTACTCCCTTGAAGCCCTCA
TCGCCACCGCAGACGGGACCAGCATCGTCTCGGACATTCGTGCCGAGATC
TCTGCCTTAGAGAGGAAAAAATTCAGCTCTCGAGGCTTCAGGCTCAAGCA
AGAAAAGAGTGCGTGGCGCCAAGAAATGCGTGGACTGAAAAAAGAGATGC
GGGTGCGAGAGGAAGGGGTGGTGAGGGACGTGCTCAAGAGTCGGGACATT
GTGCTGTGTACGTGCGTGGGGGCAGCGACTAGGTTGCTAACAGAAGAGAC
GTTTGATATGGTGGTGATAGATGAGGCCGCGCAGAGCCTGGAAGCGGCCT
GCTGGATCCCGATGCTGAAGGGAAGTAGGGTGGTGCTCGCGGGGGATCAC
AAGCAGTTGCCACCGACGATCAAGAGTCGGAAGGCGGATAAGATGGGCTT
GGCCGTGACGTTGTTCGACCGACTTATGCATTTAGATGAAGCGTTCTGGA
CCCCTTCTTCCTTGATTCCTTCTCTTCCTCCCCCTCCCTCCCCCTCTTCT
TCTTCTCTCCCCTCTTCGCCTAAGGCCAGCCAAGGGATGAAGAAGGAGAA
GAAGAGGGAGGGAGGGAGGACGAGAATGTTGACGGTGCAGTATCGAATGC
ACGCGAATATTTGCGGATGGGCGAGCAAAGCCATGTATGCTGGCTCACTG
GTCCCCGATGCGTCGGTGGCAAGCAGAACACTGGCAGGCCTGTCGGAGGG
AGGGAAGGAGAGTGAACCAAATGACAAGGAGAGGGAGGAGAGGAAGAAGG
AGCAGGAAGAGGAGAAGGAAGGGAGGGATGCGCAGGAGCAGGACATGACA
AAAGCTGTCCTCCTCTTCCTCGACACTGCTGGATGCGGCATGGACGAAGA
GGAAGGAGAGCGGGAAAAGGACAAAGACACTCCTCCTTCCCTGCCTTCCT
CCTCCCCCTCCTCCCCCTCCTCCCACTCCTCCCAAAGGAAGACCATCCGC
CCCCGCTCCCTCCTCTCCTCCTCCCGTTCCAATGAAGGTGAGGCTCTGGT
CGTCTCCGCGCACGTGCACGCGCTCGTAAGAGACACGAATGTAACCCCCG
AAGAAATAGCCATTATCACCCCATACAACGCGCAAGTGGAGCTCCTTCGC
TCCCTCCTACACCCAATCTTTCCGTCTCTCGAAATTCGGTCCGTGGATGG
CTTCCAGGGCGGGGAGAGGGAGGCGGTGGTGTTAAGCTTGGTGAGGAGTA
ATGGGAGGGGTGAGGTGGGGTTTTTGAAAGAGGATCGGCGGTTGAATGTG
GCTGTTACACGAGCGAAGAGACATGTGTGTGTGGTGGGAGATAGTGAGAC
CGTGGGGAGACACCCTTTTTTGAAAGGCTTGTTGGAGTGGATAGAGGAGA
AAGGGGAGATGAGGAGTGCGCTTGAGTATGTGCCTGAGTGGGGAGGAGGA
GGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGCGAGCG
GGGGGGAAATGAGGGATCAAACAGGAAAGGAAAAGAGCAGAAGGGCAAAG
TTGCAGCGGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAGCAACGAAGATGACAAACGGAAGTTC
TGCTGTGGTTGTGGACCTCGGCAAGAGCAGCAGCAGCAGCAGTAATGACA
ACAAGCTAGAAGAAGAGAAGGAGGATCAGGGGCGGGAAGAGGACGAAGAG
GAGGAGGAGAGCCTGCAGCAGCAGCGACCCATCGGTCCTTCCCTCTCCGA
CAGTTCTATCCCCGACAACCACCTGGTCGCACAAGTCCTCGCCTTCTGCC
TCCCCGTCTACAACCCCTCTCTCTCCCGGCGCCTCGCGCTCTCTCCCGAG
CTGAGTGGGAGACAGCGGAAAATGGTGCATGATCTTGTGGAAGGGTTGAA
ACTTTCTCCACCCATTACACATACTAGCCAAGGGGTAGGCAGAAAGCGAT
GTTTGGTGTTGGAGCGGACTCTCCCTCCCACCCCCCCTTTCCCAGTTTTG
ACGGCTGTAGCGATGGGGAAGGAGGATGGAGGAGAGGACGAGGATGAGGT
CGAGAACAAGAAGGGGGAAAAAGCATTGTCTCTAGCTAAAGCATCAGCAG
CTACAGCAACGACTAATGAGAAGAAACAAAAAAAGATGAGCACCTCCACT
CTTAACACGCAAGGGAAGCAGCAGCAGCAGAAGCAGCAGAATAAAGAGGA
GGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTGATGGCC
ATTCCTTACATTCCTTCAGCAGTGGTGGTAAGATCAGCAGCAGAAAGCAT
GTCGCTCCTCTCAAAGGGAATGTGGGGCTAGGCTCTTTACATGCCGAGCG
TCTCGCGCGCCAGCAGCAGCTACAGCAGCAACAGCAGCAGGCTGATACCA
TTGCGGTGATCGCTGAGACGGTTGTCGCACAGAACAAGGCAGCGATCAAG
AAGGGAGGGGGAAAGGAAGCAGAAAAGGAGGATGAGGAGGACGATGAGTT
GGCAGCGTTAGAGGAAGCGATGCAGACGAATGCAAACATTAGAGAGTGGC
CCAGACCTCCGAGTGAGGGGATGAAAACACGCCTGTACGGGTGGAATCGG
AACCCACAAAAAAGTACTTTGAGGGCTAGGCTGAAAGGAAAGCTGGCCGA
GAGCGAAGAGAGGAGGCGGCCGACGGCAGGAAAAGGGGAAAAAAAGGGTG
GAGGAAGAGGTGGTGGAGGGGAAGGAGGAGGAGGAAGAGGAGGAGGCGGG
GCGGATCGACGAAGATAGATAGTGTACATTCACGCACAAAATATGTGTAA
TGTGTAATGGTCCGACGACTCCGCTTCGAGATATAAAGCGAGCAACAAAG
CAGATCAGCGTTATGTGTACAGC

protein sequence of NO23G00960.1

>NO23G00960.1-protein ID=NO23G00960.1-protein|Name=NO23G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1297bp
MDGEATTKPASSSTSSGKRKSPPTVEAWVTQQKAALLEEREEEKQEVTAA
LAQLTPQECQEKGVSLLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPA
HGFSSGDEVVLRSMKGSSTSSKSSTGNLSNSGKSSSSFINGGGEISGVVT
RITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMK
AIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLS
GAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRR
LLVCAPSNVAVDNMVERIAAATSQSSSSSSSSSGSSSRASSSLYSSSFKP
PRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFS
SRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAA
TRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKS
RKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLPPPPSPSSSSLPSSPKA
SQGMKKEKKREGGRTRMLTVQYRMHANICGWASKAMYAGSLVPDASVASR
TLAGLSEGGKESEPNDKEREERKKEQEEEKEGRDAQEQDMTKAVLLFLDT
AGCGMDEEEGEREKDKDTPPSLPSSSPSSPSSHSSQRKTIRPRSLLSSSR
SNEGEALVVSAHVHALVRDTNVTPEEIAIITPYNAQVELLRSLLHPIFPS
LEIRSVDGFQGGEREAVVLSLVRSNGRGEVGFLKEDRRLNVAVTRAKRHV
CVVGDSETVGRHPFLKGLLEWIEEKGEMRSALEYVPEWGGGGGGGGGEGG
GGGGGGERGGNEGSNRKGKEQKGKVAAAAAAAATTTTTTTTTTTTTTTTA
TKMTNGSSAVVVDLGKSSSSSSNDNKLEEEKEDQGREEDEEEEESLQQQR
PIGPSLSDSSIPDNHLVAQVLAFCLPVYNPSLSRRLALSPELSGRQRKMV
HDLVEGLKLSPPITHTSQGVGRKRCLVLERTLPPTPPFPVLTAVAMGKED
GGEDEDEVENKKGEKALSLAKASAATATTNEKKQKKMSTSTLNTQGKQQQ
QKQQNKEEGQQQQQQQQQQQQRDGHSLHSFSSGGKISSRKHVAPLKGNVG
LGSLHAERLARQQQLQQQQQQADTIAVIAETVVAQNKAAIKKGGGKEAEK
EDEEDDELAALEEAMQTNANIREWPRPPSEGMKTRLYGWNRNPQKSTLRA
RLKGKLAESEERRRPTAGKGEKKGGGRGGGGEGGGGRGGGGADRRR*

Synonyms

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