NO23G00910, NO23G00910 (gene) Nannochloropsis oceanica

Overview
NameNO23G00910
Unique NameNO23G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1724
Alignment locationchr23:349801..351524 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:349801..351524 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL034nonsL034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00910.1NO23G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|655808gene_8444Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00910.1NO23G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00910 ID=NO23G00910|Name=NO23G00910|organism=Nannochloropsis oceanica|type=gene|length=1724bp
ATGTTGTCCCAATTCTGGGCACATGTACTGACAGACTCATCTCAGCTCCA
ACGCAGCCCGAGCCCCGGCACGTACCTTCCTTTCCTCCTTCGCGTCATCG
CCCTCCCTTTCCAAGCCGCCGTCGCATCCATGACTATCAAGGCCAGTAAG
ATCAATGACAATACTAGGCTGGCGCAGCAGCCGCGGCAACAGCCCAAGAA
GAAGCAGATGCAGATGCATGAGAAGGATGAGGTGGAGGAGGTGGAGGAGA
AGGAGGAGGTGGAGGAGGAGGTGGAGGTGGAGTTGCTTGTGAAAGCCTCC
TCTAAGACAATTCCTACCACCCGTACGACGGATTTGATGAGAGAGCGGAA
GCAGACACAGCAACAGCAGCAGCAGTATCATCAGAATGAGAAGAGGGCAA
AGCAAGGGGAGAGTGGAGGGGAAGAGTCCCCCAAGGCGCACCGGAAGGAG
AAGGAAGCCTCGCCCATGGCCCAGAAGGAATTGACGTTCGGCCGCAAGGT
TTTCAAAGCCAAGAGgtatgcgagtgaggagaaaggaagcaaagagggag
aggtgaagccatagcatcgtctattcgtacttttttgagaccctcctcgc
tcctttttaaatacctacctcccaccctcccatctcttgtccgcaagcga
atgtgtgataaagtgctgtatgcgagtgttaatacttttcctctcctcac
ctgtcactggctttgcccgtcttcatggagtcaagcaagaacaaagccct
cctgccctccctccctccaccccccttttccctcaaaaaatagGACGTAC
GGCAGCAGGAAGGTCTCTAGCGCTGTTTCCATCTTTTCTGTCTTGGAAAG
TGGAGCTTCTCGTCTTGATACCGGCAAGGTAAGAAAATGGCGGGAAAAAG
AGAGGGGGGAAGAGGTGGAGGAAAAGGAGGAGGACGATGAGGAGGAGGAA
GATAAGAAGAAGCGTGTCTTTTCACTCATTCAGGAGAACAAGAGTGGAAA
GAAAGGCACAGGGAAGAAACAGGCGAAGCAGCACCACCATATAAAGAAGA
ATGTGGCGACGGGCAGGGAGAGGGGGAGGGGGAAAAAGGGAGGGAAGAAG
AAGGAGGAATATGGGGGAGTCGACAGCAGGAGGACCAGTGAAGAGGAGAG
TGAGAAGGAGGAAGAGAAGAGGGAGGAGGAAGTACATGAAGAGGAGGAGG
ATGATGACGAGGCGGCTGTGGTGATGATGAAGAAGGTGAGGACGAAACAG
AAAAAGGGGGTAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGACG
AGGAGGAGGACGAGGGAGAAAGAAAAAGCTGGAGGAGGAAGGGGATTACG
ATGCCCCTCGTTGGTCCACACTTTCTGACTCCGAGGATGAGGAAGGGGAA
GATAAAGGGGGGAACAAGAAGAAAGAGGAGGGGGAGGAGGGGGAGAAGGA
GAAGGAGGAGGAGGAGCAGCAGCAGCAGCAGGAGGAGGAGAAGGAAAAGA
AGAGGAAATTGAGGAGGAAGAACCCCTTTCATCGTCCTTATCCTCCTCAT
GCAGCATCATCAGGAGGACCCCCATCATCAGCGATTTCGACGCCTATGAA
GGCCAAGGCCAATGCCGTGACAGCGACGATAATGGCGCTCGCTTCCACCT
CCTCCTTGTTCCCCCCTCCCTCCTCCGCCCCTCCCTCCCCCTCCCCTCCT
CCTCCTTCTCTTCCTCCTTCATGA
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protein sequence of NO23G00910.1

>NO23G00910.1-protein ID=NO23G00910.1-protein|Name=NO23G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=482bp
MLSQFWAHVLTDSSQLQRSPSPGTYLPFLLRVIALPFQAAVASMTIKASK
INDNTRLAQQPRQQPKKKQMQMHEKDEVEEVEEKEEVEEEVEVELLVKAS
SKTIPTTRTTDLMRERKQTQQQQQQYHQNEKRAKQGESGGEESPKAHRKE
KEASPMAQKELTFGRKVFKAKRTYGSRKVSSAVSIFSVLESGASRLDTGK
VRKWREKERGEEVEEKEEDDEEEEDKKKRVFSLIQENKSGKKGTGKKQAK
QHHHIKKNVATGRERGRGKKGGKKKEEYGGVDSRRTSEEESEKEEEKREE
EVHEEEEDDDEAAVVMMKKVRTKQKKGVGRGGGRGGGRGGRGGGRGRKKK
LEEEGDYDAPRWSTLSDSEDEEGEDKGGNKKKEEGEEGEKEKEEEEQQQQ
QEEEKEKKRKLRRKNPFHRPYPPHAASSGGPPSSAISTPMKAKANAVTAT
IMALASTSSLFPPPSSAPPSPSPPPPSLPPS*
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Synonyms
Publications