NO23G00880, NO23G00880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G00880 vs. NCBI_GenBank
Match: EWM22948.1 (hypothetical protein Naga_100396g5 [Nannochloropsis gaditana]) HSP 1 Score: 553.5 bits (1425), Expect = 6.100e-154 Identity = 272/421 (64.61%), Postives = 323/421 (76.72%), Query Frame = 0 Query: 25 MCRPPGAGWSRACFTAKGRSALLFMGCLCAFIYVAVMQPYTFHSVPSLSSSSSSLSKPQFEALSHNEVEPTERRSSSRVSTDAVHSDDCLDGDTLMLFPTAPPTYLKELNSSAVSP---RPRPIPLLATNLDYDTEGFLARLLEGWSDAKARHKLVVAGGCDPSTIEAVAFVRREHPDIAVFREREMLGCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPGFCRGFFNVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDHEMDLRHNRSQGLCTTPPTRFLAASLHHGKLDRVDYKSGTSILRDRLNDEKKAQRSNLRAKKRERDLANRLDRGFKSSKMYVNAKWGCDSEQENCVFTHPFNNEQHALSYWRLDWGRRECILRQERKVRACEYTLEKPVG 443 M PPG R T KGRS +L G LC +YVA++ PY SVPSL S +++PQ+EAL + S+ V++ DCL+ DTL+L PT P + + N S V P RPIPLLATNLDYDTEGFL RLL+GW++A ARHKLVVAGGCDPS ++AV +VR + PD+AVFRERE LGCAPGWN+ALDYM++HEDVEWCL+FNTD+YVPPG+LD LAEE+W EYD+DP FCRGFFNVTAGPDAVVFAFTR G+Q LG+FDENIYPAYYED EMDLRHNRS CT+PP RF+AA+LHHG+L +YKSGTS+LRD E K Q + + +K ERDL+NRLDRGF SS++YV+AKWGCD+EQE C+F HPFNN QH LSYWRLDW RRECILRQER+VRAC YTLE+P G Sbjct: 26 MPHPPGG--DRTPCTGKGRSTVLIAGVLCVVVYVAIIHPY---SVPSL---GSVVARPQYEAL-------RQAGGSAGGGGRGVYT-DCLNTDTLLLTPTKPAHHAE--NDSVVDPTRRTSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLE-CTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRACRYTLEEPAG 427
BLAST of NO23G00880 vs. NCBI_GenBank
Match: XP_005707650.1 (hypothetical protein Gasu_16270 [Galdieria sulphuraria] >EME31130.1 hypothetical protein Gasu_16270 [Galdieria sulphuraria]) HSP 1 Score: 147.5 bits (371), Expect = 1.000e-31 Identity = 102/315 (32.38%), Postives = 147/315 (46.67%), Query Frame = 0 Query: 136 SAVSPRPRPIPLLATNLDYDTEGFLARLLEGWSDAKARHKLVVAGGCDPSTIEAVAFVRREHPDIAVFREREMLGCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPGFCRGFF---NVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDHEMDLR---HNRSQGLCTTPPTRFLAASLHHGKLDRVDYKSGTSILRDRLNDEKKAQRSNLRAKKRERDLANRLDRGFKSSKMYVNAKWGCD-SEQENCVFTHPFNNEQHALSYWRLDWGRRECI-----LRQERKVRACEYTLE 439 S S + IP L T+L+++ F RL+ D +H +VV G D S + ++ + + E +G G+N L YM W LI N D+Y P GSL L + DP C GF N+ G F T R +Q G FDEN++PAYY+D+E+D+R NR+ +CT F + +HHG D+ Y SGT+I D + + S+ R +R RG +++ +YV KWGC ++ +C + PFN +L WR D R CI R +R C Y LE Sbjct: 55 SQFSESNQSIPFLCTSLEFNHHNFTERLINS-VDYPTKHFVVVVAGFDSSARQIARWIAENFKQVKIVWESSRIGGTGGFNICLRYMHEFYRERWGLIVNNDVYFPSGSLKSLKYQTELTLLEDPHLCLGFVSFRNMHFGYSG--FVATSRLVQYAGYFDENLFPAYYDDNELDIRLREVNRNDDVCTRHDIVF-SNGIHHGIEDQQGYLSGTAIYLD------EHENSSFRDAQR---------RGSRNNPVYVAEKWGCQGTDWNSCSYKRPFNKSYLSLKDWRFDPVYRICIEYGKFARHDR----CTYDLE 346
BLAST of NO23G00880 vs. NCBI_GenBank
Match: XP_005537766.1 (hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D] >BAM81730.1 hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 142.1 bits (357), Expect = 4.200e-30 Identity = 93/284 (32.75%), Postives = 134/284 (47.18%), Query Frame = 0 Query: 146 PLLATNLDYDTEGFLARLLEGWSDAKARHKLVVAGGCDPSTIEAVAFVRREHPDIAVFREREMLGCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPGFCRGFFNVTAGPDAV--VFAFTRRGMQMLGKFDENIYPAYYEDHEMDLRHNR---SQGLCTTPPTRFLAASLHHGKLDRVDYKSGTSILRDRLNDEKKAQRSNLRAKKRERDLANRLDRGFKSSKMYVNAKWGCDSE-QENCVFTHPFNNEQHALSYWRLDWGRRECI 424 P+L +++ GF RLL D +H +VV G DPS +E +R+++P + R+++ +G WN + YM+ V W L+ N DI +PPGSL ++ E + ++P FC G + + +RR Q+ G FDENI+PAYYED+E +R + S C P R + + HHG D DY SGT I + D R+KK +D AN + YV KW C E C HPF + W D G R C+ Sbjct: 60 PMLCFGAEFEHHGFTTRLLAS-IDEPVKHVVVVLAGEDPSILELEQTIRQDYPFCTIIRKKQRIGNVGIWNTCMRYMLDVAKVPWALLLNNDIMMPPGSLGNVSVEA-QRVVQNPEFCLGPTKLRNVRKMLWSALVVSRRTAQIAGFFDENIFPAYYEDNEFSIRIRKIHESGTPCRLFPVR-VRNTFHHGPADSPDYISGTVIYYNGGGD---------RSKKVIQDRANAW------NPHYVALKWDCPLYLWEKCKNMHPFGRSDLSPKDWAFDPGYRHCL 325
BLAST of NO23G00880 vs. NCBI_GenBank
Match: XP_005785564.1 (hypothetical protein EMIHUDRAFT_202327 [Emiliania huxleyi CCMP1516] >EOD33135.1 hypothetical protein EMIHUDRAFT_202327 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.0 bits (193), Expect = 4.400e-11 Identity = 76/267 (28.46%), Postives = 105/267 (39.33%), Query Frame = 0 Query: 174 HKLVVAGGCDPSTIEA-----VAFVRREHPD----IAVFREREMLGCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEY------DRDPGFCRGFFNVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDHEMDLRHNRSQGLCTTPPTRFLAASLHHGKLDRVDYKSGTSILRDRLNDEKKAQRSNLRAKKRERDLANRLDRGFKSSKM---YVNAKWGCDSE--QENCVFTHPFNNEQHALSYWRLDWGRR 421 HKLV+ D A A +R+ P+ ++V RE LGCA WN M+ ++ W LI N D+ PG+L +A +W RDP C F+ + FA R + +G FDEN +PAY ED+ L P R+ H L V +G+ + + KA S +RL R KS K Y+++KWG + QE P WRLD RR Sbjct: 49 HKLVLVHNLDDGQPNAEVCAWTARMRKSPPNHVKQVSVVTYRENLGCAAAWN---TIMLQNQQSPWWLIVNADVSFRPGTLRTIASHVWAGLLASTPGGRDP-VCNWLFHGWS-----AFALANRALHRVGTFDENFWPAYSEDY---------SSLSPINPDRY--PRWVHPLLKIVSSLTGSVSIAHETSSTFKANSS------------SRLHRTVKSGKNNNDYLSSKWGTKFKYCQEG-----PLQTNATVPIRWRLDKARR 278
BLAST of NO23G00880 vs. NCBI_GenBank
Match: XP_005779447.1 (hypothetical protein EMIHUDRAFT_236095 [Emiliania huxleyi CCMP1516] >EOD27018.1 hypothetical protein EMIHUDRAFT_236095 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 75.1 bits (183), Expect = 6.300e-10 Identity = 45/143 (31.47%), Postives = 65/143 (45.45%), Query Frame = 0 Query: 174 HKLVVAGGCDPSTIEA-----VAFVRREHPD----IAVFREREMLGCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPG----FCRGFFNVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDH 304 HKLV+ D A A +++ P+ ++V RE LGCA WN M+ ++ W LI N D+ PG+L +A +W PG C F+ + FA R + +G FDEN +PAY ED+ Sbjct: 49 HKLVLVHNLDDGQPNAEVCAWTARMKKSPPNHVKQVSVVTYRENLGCAAAWN---TIMLQNQQSPWWLIVNADVSFRPGTLRTIASHVWAGLLASPGGRDPVCNWLFHGWS-----AFALANRALHRVGTFDENFWPAYSEDY 183
BLAST of NO23G00880 vs. NCBI_GenBank
Match: GAQ85850.1 (hypothetical protein KFL_002570180 [Klebsormidium nitens]) HSP 1 Score: 72.0 bits (175), Expect = 5.400e-9 Identity = 74/294 (25.17%), Postives = 128/294 (43.54%), Query Frame = 0 Query: 143 RPIPLLATNLDYDTEGFLARLLEGWSDAKARHKLVVAG------GCDPSTIEAVAFVRREHPD--IAVFREREMLGCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPGFCRGFFNVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDHEMDLRHNRSQGLCTTPPTR---FLAASLHHG-KLDRVDYKSGTSILRDRLND---EKKAQRSNLRAKKRERDLANRLDRGFKSSKMYVN----AKWGC-DSEQENCVFTHPFNNEQHALSYWRLD 417 RPIP++ T + + +L RL+ D R ++ G D S +A+ + + P ++V +G GWN + H+ D W L+ + D+ PG+L + +E+ E+ + F + FA R + ++G +DEN++P+YY+D+E R R+Q L TP + ++ + G + D + G S L D E+ A+R + + R A + GF S + +N + W EQ + PFNN + + W LD Sbjct: 128 RPIPVVGTPV-LNNGHWLKRLVYS-IDVPVRMIQIIVGTMPGSKTMDTSVRDALEELNQRLPPGFLSVVDMGCNMGSGGGWNAVFE---HNLDAPWYLLVSGDVAFAPGALARIPDEL-EDPQNEKIFAFMYSQFR------FFALRREALDLVGVWDENMWPSYYDDNEYQARMERAQAL--TPGVQRICYIGEPMPDGRRFDEPAHIHGGSELLGPYADVWLEEGAERISGALRAEPRLAARKGPSGFNSLRFMMNKYNFSYWEMKPKEQLEISWRLPFNNPERGIPRWVLD 407
BLAST of NO23G00880 vs. NCBI_GenBank
Match: GAQ78373.1 (hypothetical protein KFL_000120210 [Klebsormidium nitens]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 65/212 (30.66%), Postives = 88/212 (41.51%), Query Frame = 0 Query: 210 GCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPGFCRGFFNVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDHEMDLRHNRSQGLCTTPPTRFLAASLHHGKLDRVDYKSGTSILRDRLNDEKKAQRSNLRAKKRERDLANRLDRGFKSSKMYVNAKW-----GCDSEQENCVFTHPFNNEQHALSYWRLD 417 GCA GWN + + D W LI N D PG+L L ++ +P F+ +TA VF T+R + +G FDENI+PAY ED + DLR S + + P F S HG D +SG+S L D + S + + NR+ Y KW GC + E +F P N L W D Sbjct: 196 GCAGGWNTIVHSTL---DSPWWLIINDDAAFVPGALRTL----YDYVSSNPNV--AFYKLTA---YQVFIITQRAVAEVGVFDENIWPAYVEDCDYDLRLKLSGVMVASRPPEF---SNIHG-----DPESGSS---SSLIDTRGGGHSGYGQRSKCSHSNNRI---------YYQKKWNLSVPGCGRQLEG-MFQTPHGNPSRNLDSWTFD 374
BLAST of NO23G00880 vs. NCBI_GenBank
Match: GAQ82940.1 (hypothetical protein KFL_001300030 [Klebsormidium nitens]) HSP 1 Score: 68.6 bits (166), Expect = 5.900e-8 Identity = 63/212 (29.72%), Postives = 87/212 (41.04%), Query Frame = 0 Query: 210 GCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPGFCRGFFNVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDHEMDLRHNRSQGLCTTPPTRFLAASLHHGKLDRVDYKSGTSILRDRLNDEKKAQRSNLRAKKRERDLANRLDRGFKSSKMYVNAKW-----GCDSEQENCVFTHPFNNEQHALSYWRLD 417 GCA GWN + + D W LI N D PG+L L + + D F+ +T VF T+R + +G FDENI+PAY ED + DLR S + + P F S HG D +SG S L + + S + + NR+ Y KW GC + E +F P N +L+ W D Sbjct: 230 GCAGGWNTIIHSTL---DSPWWLIVNDDAAFVPGALRTLYDYVSSNPD------VAFYKLTT---YQVFLITKRAVTEVGVFDENIWPAYGEDCDYDLRLQLSGVMVASRPPEF---SNIHG-----DPESGAS---SSLINTRGGGHSGYGQRSKCSHSNNRI---------YYQKKWNLSVPGCGRQLEG-MFRTPHGNPSRSLASWTFD 408
BLAST of NO23G00880 vs. NCBI_GenBank
Match: GAQ86300.1 (hypothetical protein KFL_002810080 [Klebsormidium nitens]) HSP 1 Score: 66.2 bits (160), Expect = 2.900e-7 Identity = 60/213 (28.17%), Postives = 80/213 (37.56%), Query Frame = 0 Query: 210 GCAPGWNKALDYMMHHEDVEWCLIFNTDIYVPPGSLDVLAEEIWEEYDRDPGFCRGFFNVTAGPDAVVFAFTRRGMQMLGKFDENIYPAYYEDHEMDLRHNRSQGLCTTPPTRFLAASLHHGKLDRVDYKSGTSILRDRLNDEKKAQRSNLRAKK--RERDLANRLDRGFKSSKMYVNAKWGCDSE----QENCVFTHPFNNEQHALSYWRLD 417 GCA GWN + W L+ N D PG+L L + + D GF VF T+ + +G FDENI+PAY ED + DLR S L P F HG D +SG S S+L + D R +++MY KW S+ Q +F P N +L+ W D Sbjct: 154 GCAGGWNSIIH---STSSAPWWLVINDDAAFTPGALRTLHDYVSGTPDVAVYKLTGF---------QVFVLTQLAVAKVGVFDENIWPAYAEDCDYDLRIQLSGVLVAPRPPEFTNI---HG-----DPESGAS--------------SSLVTSRGGGHPDYGRRNQCSHTNNRMYYQKKWNLSSQSCGKQLEGMFLTPHGNPSRSLASWTFD 332 The following BLAST results are available for this feature:
BLAST of NO23G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00880 ID=NO23G00880|Name=NO23G00880|organism=Nannochloropsis oceanica|type=gene|length=4230bpback to top protein sequence of NO23G00880.1 >NO23G00880.1-protein ID=NO23G00880.1-protein|Name=NO23G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bpback to top Synonyms
Publications
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