NO23G00870, NO23G00870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G00870 vs. NCBI_GenBank
Match: EWM22953.1 (Protein of unknown function DUF2358 [Nannochloropsis gaditana]) HSP 1 Score: 329.3 bits (843), Expect = 1.900e-86 Identity = 162/194 (83.51%), Postives = 181/194 (93.30%), Query Frame = 0 Query: 266 ASGDLLRAFPSMTEQTPPPSPRLQGDDDKRNQQGGNNFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEVLNIRWCPARQCIEVRFQIRVDTLSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRNDLSEKPSMVSLFYATRQVLIGGNQPIPDSVGM 460 A G++ +AFPSMTEQ PPPSP++QGD + N+ +NFTINLG+ALDHLRVDVPLLF+REPDLSIYTEDVRLRD AR+YASGKFMYQMVYFSLR+A++FMPMPPLVEVLNIRWCPARQ IEVRFQIRVDTLSDSLYFDAVSVYRVNA+GLIYEHLIEK+IRNDLSEKPS+V+LFYATRQVL+GG PIPDSVGM Sbjct: 309 ARGEVRQAFPSMTEQ-PPPSPQVQGDGPEPNR--NDNFTINLGKALDHLRVDVPLLFEREPDLSIYTEDVRLRDHARIYASGKFMYQMVYFSLRVARIFMPMPPLVEVLNIRWCPARQSIEVRFQIRVDTLSDSLYFDAVSVYRVNARGLIYEHLIEKVIRNDLSEKPSIVNLFYATRQVLVGGKVPIPDSVGM 499
BLAST of NO23G00870 vs. NCBI_GenBank
Match: KOO23847.1 (hypothetical protein Ctob_000770 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 78.6 bits (192), Expect = 5.700e-11 Identity = 64/207 (30.92%), Postives = 100/207 (48.31%), Query Frame = 0 Query: 272 RAFPSMTEQTPPPSPRLQGDDDKRNQQGGNNFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEV-LNIRWCPARQCIEVRFQIR---------VDTLSDS----LYFDAVSVYRVNAKGLIYEHLIEKIIRNDLSEKPSMVSLF-------YATRQVLIGGNQPIPDSV 458 RA P E TP P P L G Q+G + F +N GRA+D LR D P LF PD+SI+T+++ L D + +GK Y+ V+ +LR F+ + + + IR + I VR+ + + TL + ++ D VSVY ++ GLI +H +E I+ + + L YAT Q + QP+ D++ Sbjct: 50 RATPK-KESTPEPLP-LWGLPPPPEQRGPSVFKLNQGRAIDVLRHDYPRLFTERPDMSIFTDNIELHDPSGKRLAGKKQYERVFDALR----FLRRTTMQDAQVGIRLVADDKSIRVRWNAKLWMRDPATGLTTLVNGEPALVHIDGVSVYDLDKDGLIRQHRLENIVLTGQEPLATPIQLAFAWPATGYATPQAAVPFFQPLADAL 250
BLAST of NO23G00870 vs. NCBI_GenBank
Match: CBN79040.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.1 bits (183), Expect = 6.300e-10 Identity = 47/165 (28.48%), Postives = 77/165 (46.67%), Query Frame = 0 Query: 274 FPSMTEQTPPPSPRLQGDDD----KRNQQGGNNFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLR-LAKVFMPMPPLVEVLNIRWCPARQCIEVRFQIRVDTLSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRNDLSEKP 434 FPS+T Q P G +D +R+ +F +NLG+ + LR D P +F P I+TE++ LRD V G Y+ V+ +LR + FM L W + + +++ +Y D +S Y +N+ GL Y H +E ++ N + +P Sbjct: 40 FPSITRQPRPGIIARDGTEDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEP 204
BLAST of NO23G00870 vs. NCBI_GenBank
Match: XP_002956607.1 (hypothetical protein VOLCADRAFT_77161 [Volvox carteri f. nagariensis] >EFJ42374.1 hypothetical protein VOLCADRAFT_77161 [Volvox carteri f. nagariensis]) HSP 1 Score: 75.1 bits (183), Expect = 6.300e-10 Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 0 Query: 295 RNQQGGNNFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEVLNIRWCPARQCIEVRFQI----RVDTLSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRNDLSEKPSMVSLFYATRQVLIGG--------NQPIP 455 RNQ ++ N+G A+ LR D+P+LF RE + IY +DV RD + G YQ++++SLR V+V I W P I++R+ + RV ++ FD +S YR+++ G IYEH ++ I+ D P M AT L+ G QP+P Sbjct: 106 RNQGRSEDYFANVGDAIRCLREDIPMLFQRELNFDIYRDDVVFRDPRNCF-KGMKNYQLIFWSLRFHGKIFFKTLYVDVRRI-WQPEDGIIKMRWTVHGIPRVPWEAEGT-FDGISTYRLDSHGKIYEHSVDNILLRD----PPM-----ATNPPLLAGLNLQPLAPQQPVP 265
BLAST of NO23G00870 vs. NCBI_GenBank
Match: PNW70701.1 (hypothetical protein CHLRE_17g731100v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 74.3 bits (181), Expect = 1.100e-9 Identity = 51/157 (32.48%), Postives = 81/157 (51.59%), Query Frame = 0 Query: 302 NFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEVLNIRWCPARQCIEVRFQI----RVDTLSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRNDLSEKPSMVSLFYATRQVLIGGNQPIP 455 ++ N+G A+ LR D+P+LF RE + SIY ED+ RD R G YQ++++SLR V+V I W P I++R+ + RV ++ FD +S YR+++ G IYEH ++ ++ D + L Q L+ QP+P Sbjct: 107 DYFANVGDAIRSLREDIPMLFQRELNYSIYREDIVFRD-PRNTVKGMKNYQLIFWSLRFHGKLFFNKLYVDVKRI-WQPEDSVIKMRWTVHGIPRVPWEAEGT-FDGISTYRLDSHGRIYEHCVDNVLLRDPPMATNPPLLAGLNLQPLV-PQQPVP 259
BLAST of NO23G00870 vs. NCBI_GenBank
Match: EPS65551.1 (hypothetical protein M569_09224, partial [Genlisea aurea]) HSP 1 Score: 73.9 bits (180), Expect = 1.400e-9 Identity = 54/171 (31.58%), Postives = 88/171 (51.46%), Query Frame = 0 Query: 278 TEQTPPPSPRLQGDDDKRNQQGGNNFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEVLNIRWCPARQCIEVRFQIR-VDTL--SDSLYFDAVSVYRVNAKGLIYEHLIEKIIRN---DLSEKPSMVSLFYAT 443 T + P R G +DK+ Q + F +NLG A+ LR D+P +F R+ + IY +D+ RD + +G Y+M++++LR + ++VL I W P+ I VR+ +R V + S F A S Y+++ G IYEH ++ + N L S++ L AT Sbjct: 3 TRRAVVPVSRSAGVEDKKQQDQRDEFYVNLGLAVRTLREDMPSIFSRDLNYDIYRDDITFRDPLNTF-TGIENYKMIFWALRFHGRLLFSEISLDVLRI-WQPSETTILVRWNLRGVPRIPWEASGQFQATSRYKLDRNGRIYEHKVDNLAFNFPKTLKPAVSVLDLVTAT 171
BLAST of NO23G00870 vs. NCBI_GenBank
Match: XP_020585753.1 (uncharacterized protein LOC110028302 [Phalaenopsis equestris]) HSP 1 Score: 73.6 bits (179), Expect = 1.800e-9 Identity = 44/143 (30.77%), Postives = 75/143 (52.45%), Query Frame = 0 Query: 288 LQGDDDKRNQQGGNNFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEVLNIRWCPARQCIEVRFQ---IRVDTLSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRN 428 + G DDK N++ +NLG A+ LR D P++F +EP SIY +D+ +D + G Y+ ++ ++R + V+++++ W P I +R+ IR FD +SVY+++ KG I+EH + I RN Sbjct: 94 MDGGDDK------NDYYVNLGNAIRTLREDYPIIFYKEPGFSIYRDDIVFKDPLNTFV-GINNYKQIFSAMRFIGPVLFKALWVDIVSV-WQPVENTIMIRWTVNGIRRVPWESCGRFDGISVYKLDRKGKIFEHQVNNIARN 228
BLAST of NO23G00870 vs. NCBI_GenBank
Match: XP_009039918.1 (hypothetical protein AURANDRAFT_66460 [Aureococcus anophagefferens] >EGB05266.1 hypothetical protein AURANDRAFT_66460 [Aureococcus anophagefferens]) HSP 1 Score: 72.4 bits (176), Expect = 4.100e-9 Identity = 45/159 (28.30%), Postives = 73/159 (45.91%), Query Frame = 0 Query: 301 NNFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRL-AKVFMPMPPLVEVLNIRWCPARQCIEVRFQIRVDTLSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRNDLSEKPSMVSLFYATRQVLIGGNQPIPDSVG 459 + F +NLG A+D L+ DVP DREP+ ++YT DV+L D V G Y+ + +RL +V + + L W R + + DAVS + +N +G I++H ++++ N P + A RQ ++ G P G Sbjct: 96 SEFELNLGEAIDALKADVPDFPDREPNYAVYTADVQLADPTGVQTRGLTSYKQFFAMIRLFRRVMIDRAEVTYRLRYDWSGKRIIVTWYSSWTARGSRTPAHVDAVSYFHLNEEGRIFKHEVDRVQINGQMMNPPYSVGWLAFRQYVLQGLDGAPAPAG 254
BLAST of NO23G00870 vs. NCBI_GenBank
Match: XP_001701509.1 (predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 72.0 bits (175), Expect = 5.400e-9 Identity = 45/131 (34.35%), Postives = 72/131 (54.96%), Query Frame = 0 Query: 302 NFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEVLNIRWCPARQCIEVRFQI----RVDTLSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRND 429 ++ N+G A+ LR D+P+LF RE + SIY ED+ RD R G YQ++++SLR V+V I W P I++R+ + RV ++ FD +S YR+++ G IYEH ++ ++ D Sbjct: 30 DYFANVGDAIRSLREDIPMLFQRELNYSIYREDIVFRD-PRNTVKGMKNYQLIFWSLRFHGKLFFNKLYVDVKRI-WQPEDSVIKMRWTVHGIPRVPWEAEGT-FDGISTYRLDSHGRIYEHCVDNVLLRD 157
BLAST of NO23G00870 vs. NCBI_GenBank
Match: PRW57262.1 (U2 snRNP-associated SURP motif-containing [Chlorella sorokiniana]) HSP 1 Score: 72.0 bits (175), Expect = 5.400e-9 Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 0 Query: 302 NFTINLGRALDHLRVDVPLLFDREPDLSIYTEDVRLRDEARVYASGKFMYQMVYFSLRLAKVFMPMPPLVEVLNIRWCPARQCIEVRFQIRVDT-LSDSLYFDAVSVYRVNAKGLIYEHLIEKIIRNDLSEKPSMVSLFYATRQVL 447 +F N+G A+ LR D PLLF +E + +IY ED+ +D ++ G Y+++++SLR V+VL I W P I++R+QI T + + FD +SVYR++ G +Y+H + + L + P L YA VL Sbjct: 166 DFFANVGDAIRTLREDYPLLFAKELNYAIYREDLVFKD-PQLSFRGLRNYKLIFWSLRFHGRLFLQAANVQVLRI-WQPQDDVIKLRWQISARTRMGTNGTFDGISVYRLDRHGRVYQHEVTDV---QLRDPPVTNPLLYALNFVL 306 The following BLAST results are available for this feature:
BLAST of NO23G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00870 ID=NO23G00870|Name=NO23G00870|organism=Nannochloropsis oceanica|type=gene|length=1762bpback to top protein sequence of NO23G00870.1 >NO23G00870.1-protein ID=NO23G00870.1-protein|Name=NO23G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bpback to top Synonyms
Publications
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