NO23G00650, NO23G00650 (gene) Nannochloropsis oceanica

Overview
NameNO23G00650
Unique NameNO23G00650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1267
Alignment locationchr23:258828..260094 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:258828..260094 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO23G00650 vs. NCBI_GenBank
Match: EWM22960.1 (hypothetical protein Naga_100102g3 [Nannochloropsis gaditana])

HSP 1 Score: 188.3 bits (477), Expect = 3.200e-44
Identity = 108/205 (52.68%), Postives = 124/205 (60.49%), Query Frame = 0
Query:    3 SVVSGAQSPPIVKSPLPPEIEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNVGKKKVDWVMADGTKYTAKKAAALTQLAKRANSRGGSPERKRGEDKDDNNYGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATKGLVTETTINCGGTQMAGSILPGTGPLPGTSGGCVLATTLILRP 208
            S  S A +PP VK PLPPEIE+LHAS VA GQETYTDPATGYMVM+ALYH RRG+CCGN+CRHCPY+S+NVGKKKVDWVM+DG+KYTAKKAAAL + AK     G SP    G+D   +  G                                     A      ET +      +  S LPGTGPLPG SGGCVLA+ LI+RP
Sbjct:    2 SPASSATAPP-VKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAK---DHGASPSAGEGDDHGGHG-GGQENSGSDHNSTVQVLTADLVKGSATAKMGQDDAEGMANVANPRETGVFAVRPAVVTSALPGTGPLPGASGGCVLASLLIMRP 201          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: XP_005853618.1 (putative-like protein [Nannochloropsis gaditana CCMP526] >EKU22744.1 putative-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 167.9 bits (424), Expect = 4.500e-38
Identity = 85/122 (69.67%), Postives = 96/122 (78.69%), Query Frame = 0
Query:    3 SVVSGAQSPPIVKSPLPPEIEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNVGKKKVDWVMADGTKYTAKKAAALTQLAKRANSRGGSPERKRGEDKDDNNYG 125
            S  S A +PP VK PLPPEIE+LHAS VA GQETYTDPATGYMVM+ALYH RRG+CCGNVCRHCPY+S+NVGKKKVDWVM+DG+KYTAKKAAAL + AK     G SP    G+D   +  G
Sbjct:    2 SPASSATAPP-VKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNVCRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAK---DHGASPSAGEGDDHGGHGGG 119          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: KXS09726.1 (hypothetical protein M427DRAFT_63628 [Gonapodya prolifera JEL478])

HSP 1 Score: 95.9 bits (237), Expect = 2.200e-16
Identity = 46/76 (60.53%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   18 LPPEIEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNVGKKKVDWVMADGTKYTAKKA 94
            LPPEIEELH   V  G  TYTDPATGYMV +AL H  RGYCCGN CRHCP+   NVG+K  + +  D     AKKA
Sbjct:   31 LPPEIEELHRCAVEKGDRTYTDPATGYMVFTALSHRDRGYCCGNTCRHCPFEYENVGRKGKNMIRRD---KEAKKA 103          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: ORZ33978.1 (hypothetical protein BCR44DRAFT_37294 [Catenaria anguillulae PL171])

HSP 1 Score: 86.3 bits (212), Expect = 1.700e-13
Identity = 46/107 (42.99%), Postives = 63/107 (58.88%), Query Frame = 0
Query:   11 PPIVKSPLPPEIEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNVGKKKVDWVMADGTKYTAKKAAALTQLAKRANSRGGSPERKRGED 118
            P    S  PP  +++H   +  GQ++Y DPATGYMVM++L H++RGYCCGN CRHCP++  NVG  K+D V  D      K  A   Q A +A++ G       G+D
Sbjct:    5 PTSPSSDPPPSWQKVHDEAIMKGQDSYIDPATGYMVMTSLSHSKRGYCCGNNCRHCPFDHRNVG--KLDQVKID------KAQARARQKAAKADNAGVGAASASGDD 103          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: KNE55667.1 (hypothetical protein AMAG_01555 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 80.9 bits (198), Expect = 7.300e-12
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   24 ELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNVGK 76
            ++HA     G+ETYTDP TGY V +A+ H +RGYCCGN CRHCPY   NVGK
Sbjct:   73 QIHADACKRGEETYTDPVTGYSVFTAVSHKKRGYCCGNQCRHCPYEYRNVGK 124          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: PAA74019.1 (hypothetical protein BOX15_Mlig015826g4 [Macrostomum lignano])

HSP 1 Score: 80.5 bits (197), Expect = 9.500e-12
Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    2 SSVVSGAQSPPIVKSPLPPEIEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNVGK 76
            S   S  ++    ++ LPPE+++ H   V  G++TY DPATGY V + L H +RG+CCG++CRHCPYN   V K
Sbjct:   54 SPSASNCKTSTTAQAALPPEVQQAHKCAVDRGEDTYIDPATGYRVFTELAHKKRGHCCGHLCRHCPYNHEAVKK 127          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: XP_003641717.3 (PREDICTED: uncharacterized protein C1orf53 homolog isoform X1 [Gallus gallus])

HSP 1 Score: 80.1 bits (196), Expect = 1.200e-11
Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   16 SPLPPEIEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNV---GKKK 78
            +PL   I ELH    AAG++TY DPATGY V++ + H RRG CCG+ CRHCPY  +NV    KKK
Sbjct:   97 TPLERRIVELHREAAAAGRQTYVDPATGYQVLTEVAHLRRGKCCGSACRHCPYEQVNVKDQSKKK 161          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: XP_020041520.1 (uncharacterized protein C1orf53 homolog [Castor canadensis])

HSP 1 Score: 80.1 bits (196), Expect = 1.200e-11
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 0
Query:   22 IEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNV---GKKK 78
            I ELHA+  AAGQ++Y DPATGY+V++ L H +RG CCG+ CRHCPY  +NV    KKK
Sbjct:   81 IAELHAAACAAGQQSYVDPATGYLVLTRLAHLQRGSCCGSACRHCPYGQVNVKDPSKKK 139          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: PAA62640.1 (hypothetical protein BOX15_Mlig015826g1, partial [Macrostomum lignano])

HSP 1 Score: 79.3 bits (194), Expect = 2.100e-11
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    2 SSVVSGAQSPPIVKSPLPPEIEELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYN 70
            S   S  ++    ++ LPPE+++ H   V  G++TY DPATGY V + L H +RG+CCG++CRHCPYN
Sbjct:   51 SPSASNCKTSTTAQAALPPEVQQAHKCAVDRGEDTYIDPATGYRVFTELAHKKRGHCCGHLCRHCPYN 118          
BLAST of NO23G00650 vs. NCBI_GenBank
Match: KNE58481.1 (hypothetical protein AMAG_04052 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 79.0 bits (193), Expect = 2.800e-11
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   24 ELHASVVAAGQETYTDPATGYMVMSALYHTRRGYCCGNVCRHCPYNSMNVGK 76
            ++HA      +ETYTDPATGY V +A+ H +RGYCCGN CRHCPY   NVGK
Sbjct:   76 QIHADACMRCEETYTDPATGYSVFTAVSHKKRGYCCGNQCRHCPYEYRNVGK 127          
The following BLAST results are available for this feature:
BLAST of NO23G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22960.13.200e-4452.68hypothetical protein Naga_100102g3 [Nannochloropsi... [more]
XP_005853618.14.500e-3869.67putative-like protein [Nannochloropsis gaditana CC... [more]
KXS09726.12.200e-1660.53hypothetical protein M427DRAFT_63628 [Gonapodya pr... [more]
ORZ33978.11.700e-1342.99hypothetical protein BCR44DRAFT_37294 [Catenaria a... [more]
KNE55667.17.300e-1261.54hypothetical protein AMAG_01555 [Allomyces macrogy... [more]
PAA74019.19.500e-1245.95hypothetical protein BOX15_Mlig015826g4 [Macrostom... [more]
XP_003641717.31.200e-1155.38PREDICTED: uncharacterized protein C1orf53 homolog... [more]
XP_020041520.11.200e-1159.32uncharacterized protein C1orf53 homolog [Castor ca... [more]
PAA62640.12.100e-1147.06hypothetical protein BOX15_Mlig015826g1, partial [... [more]
KNE58481.12.800e-1161.54hypothetical protein AMAG_04052 [Allomyces macrogy... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL034nonsL034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006313NSK006313Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00650.1NO23G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601932gene_8413Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100102g3gene7479Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00650.1NO23G00650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00650 ID=NO23G00650|Name=NO23G00650|organism=Nannochloropsis oceanica|type=gene|length=1267bp
ATGTCGTCGGTAGTTTCGGGGGCGCAGTCGCCCCCAATCGTCAAGTCGCC
CTTGCCTCCCGAGATCGAGGAGCTACATGCCTCGGTGGTCGCCGCAGGAC
AAGAGACCTACACGGACCCTGCAACTGGCTATATGGTCATGAGTGCCCTC
TACCACACgtatgttacaaatcagaatgaaagaaaagtgaaaggcgcaat
gcttgttggtcttttcggcttatttttggactcacttttcccttcctcct
cccgaacccacgccacgcacgcaccataactactactacttcacctctac
gacctagGCGGCGTGGCTACTGCTGCGGAAACGTGTGTCGGCACTGCCCA
TATAATTCTATGAATGTGGGCAAGAAGAAGGTGGACTGGGTAATGGCGGA
TGGGACCAAGTACACGGCCAAGAAAGCTGCCGCCTTGACACAGTTGGCCA
AACGTGCAAACTCAAGGGGGGGGTCCCCAGAAAGGAAAAGGGGCGAGGAT
AAAGACGACAACAACTATGGATGTGCGGGAAGCAGTAGTGGTAGCAGCCA
TGATGGTAAAAGCAGCGGCAACAGCAGCGACAGCTGCAGCAGCTGCTGCA
GCAGCAACGGGAGCAGCACTGTGGCGGCGGAGGCCACCAAGGGGCTCGTC
ACCGAGACCACGATAAATTGCGGTGGCACGCAGATGGCGGGCTCAATTCT
ACCAGgtgagcagcaggggggtcctcaagagggaatgaaagcgactttga
ttgatcaactctttttcattctttttttgggaagGGACTGGCCCACTGCC
GGGGACGAGTGGGGGGTGCGTGCTAGCAACCACGTTGATATTGCGGCCCG
CGGCTCTCTTCCACGTTGGTAGGGTTTGCACCCCTGCGAACGATGCAGCT
GGAGCGTCAACATTTTTGCAAAGAAATACGTGGTGGGCAGGGGCCGTCAG
CGGCAGGCATTCCTGGGGTAGGGCGATACGGCAGGTGCTTGGGTCGTATC
Ggtacgcatggaaggaagggggcggctggatttttttgatttttgacctc
caacgaggccatgatttaatttgttggcatccttccaagaagtatcttga
agaagcaggaaatgacccatacaatgtttgctactatctatcttttcctc
gcatcctcctcttgacaacacagGTCGGCTCGGGTTGGGGGCTTAGCGAT
GGCCTTTACGCTGCTGCGAGGACCACGCACGACAGTGAGCATGATAGACA
TACACAGTGAGACATGA
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protein sequence of NO23G00650.1

>NO23G00650.1-protein ID=NO23G00650.1-protein|Name=NO23G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=289bp
MSSVVSGAQSPPIVKSPLPPEIEELHASVVAAGQETYTDPATGYMVMSAL
YHTRRGYCCGNVCRHCPYNSMNVGKKKVDWVMADGTKYTAKKAAALTQLA
KRANSRGGSPERKRGEDKDDNNYGCAGSSSGSSHDGKSSGNSSDSCSSCC
SSNGSSTVAAEATKGLVTETTINCGGTQMAGSILPGTGPLPGTSGGCVLA
TTLILRPAALFHVGRVCTPANDAAGASTFLQRNTWWAGAVSGRHSWGRAI
RQVLGSYRSARVGGLAMAFTLLRGPRTTVSMIDIHSET*
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Synonyms
Publications