NO23G00610, NO23G00610 (gene) Nannochloropsis oceanica

Overview
NameNO23G00610
Unique NameNO23G00610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2896
Alignment locationchr23:247212..250107 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:247212..250107 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL034nonsL034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006310NSK006310Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00610.1NO23G00610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|195514gene_8407Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00610.1NO23G00610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00610 ID=NO23G00610|Name=NO23G00610|organism=Nannochloropsis oceanica|type=gene|length=2896bp
GTCCTTATTGTTTGTTTCTCTTCTTGCGCTTTGGTATGCGAACCGAGACA
CACGGAAACCGGTCAATTCTTCACAAACGACTGCCCGATCCAAAGCTACC
ACTATTGCTTTATCTTGCATCCCAAACACCAGGTTTTCCGTACGCTTATT
CCACTAATAGTTGAGACCTCCTGATGATCATCCAGTGCCGCCCGATGGCG
ACCAGATCGCTCCAAGTCCCATATCAAGGATTTGGTGGCGTTCATGCCAA
CGACTCCTTTTGCCACAGCGGCATACATGCATATATATACACACACACAC
ACACATACATATATATATACACATATATCATATGCTTATATGTCCGATTC
AGGTCCACCAGCGGAAGCGTAAATCTTCGATTGAAAGTTGCGGAAAGGAG
AGAACCTGTGAGAATAAAGATGAAGGAAAAAGGGAAGCGTGATAGAAAGG
ATGTAGATCTAGGACAAAAGGCGATTGATGCGCGGGAAAAAGGTATAAAA
GGGTGAACAAAAAGCAGCAGCAAGAAGAAAAAGAACAAAGAACATCACCC
TCGGTCACCCTCCTGCGTTCTCCTGCGTTTCCTTCACCAACGGCTTGGTC
CCTTGGCCCTATGGGCGAGAGACAACGAACCGAACACACCTTTCCACCAC
GCAACTCATACACTTCATGAAGATTTTATTATGCCAAGATCCGCGGCTCT
AAAGTTGCTTCAGTGGCCGGCAAAGGCAAGCACAGATTCACGCAAAGAAT
AAGACGACAACATACACCATCATCATCACTCTCCCGCCGCTTATACCCTC
CCCCTCGTCTTGCCTTGGACCCAGCGTGCACGCCGTACCGTGGCGTAGAA
GCAACAAAATGATGCGCAGTGCCTTTCTCCCATCCTTTCCATGCCCCCCT
GCCTCTCCCCGCTGATCCCCACCACCTCCTCTCCATTTTTTCAATACAGA
CACCCCCCCGCTCCAATTTAACGCACCATGGCCACGCCACTCGGCCCTCC
TCCTCCCAGCAACAAGCCCCGCGCTCCTGCTCCTTCCTCCTCTCGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAACACTGAATTCGACCTCGTTCGT
CACGGTCCGCCTGGAGACATCCTCCACCAACTCATCCGATTCGATGACGG
CGAAGACCCCTTCAATCGAGGCCAGCCTCCCTTCTACTGCTACCAAGAAA
AAGAGGAAATTCTCCCGGATGCCGACGAAGCAAGTGCAACTGAGCCCTCA
GGAAAGGCTGCGAAACGCCCACCACGCGCTCCCCGCGCTAGCGTGCGTTG
GACGCTCGAAGACAAGGCCACTATTACGGCACGTAAACACCAAGCAGAAG
CAGCAGCAGCAGCAGCCGCAACATCAGGAAATGGAGAGGTAGGAAACGAG
CAGCAATCACAACAACCGCAAGGTCAACGATTGCTCTACCACGGCAAGCC
CCTAGCACACGCCCCCGGAACAGCCTACGTTCTGATGGTGCCCAACCGTT
CCTCAACAGCTGGAGGGAAGGATGGAGGGAAAGGGGGAGGGAGGAAGCAG
ATTTTTGTCGTGCCGGTCGGTCCATGGATCGGATATCACCGAGTAGCGGA
TGCGGTTGATGTCCCTTCGTCTGTGAAAGAGGCGGAGGCCATGATGAAGG
CAGGAGGGGGAGGAGGAGCCGGGGGAGGAAAAGGGAGAGGGAAGAAGGAG
GAGGAGGAGGAGCAGGGGGAGGAGAAGCTGACGCGAAGGGAGCTGCTCGA
GAGGTTTCTGACGAAGAGCAGAGGGATTCTGGACGAGGGGGGAAAGGTGG
GAGGGAAAGTGGGGGGGAAGGGGGGTAAACAGAACTCGTCCTCAGGAGGG
GGGCTGAGAGGAAGGAAAGGGGTGAAGATGGAACGGAGTCACGAGGAAGG
GCGGAAGGGGAGAGAGGGTCCAGGAAGAAGAAGGAGAGAAGGAGGGCTAG
GAGGCGTGGATGGGGATATAGGGGATGACGACTTGGCTCAGAATGCGGAT
AGTCGCGAATTGATCGGCTTGGGTTCGGATAACGAGgtaagtcagccttc
cctcccttcctccctccctccctctctccctccctctttattcctccccc
tctccttgtttgtttcttaaccctttccacttgccgtatgtggcggggct
taaagtcaatttgtagagggattttgtcttgtgtcatgtctcgctcaacg
cctgtccatcctccctccctccccccctccctctctcagGATGAATACGA
ATTCCAAGATGACGAGGAAGACAAGCACGATGAGACCAATTTCCACCTAG
GCGAAATGGATGAAGATAGCAGCGAGGAGGAAGAGGAAGAGGAAGAGGAA
GAGGAAGAGAAGGAGGCGGATAGGGCACTGTTGTGTTCCCTGGCCGAGAG
GGAAGAGGACGACGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGAAGAGAC
TTGTGGCTGCTTCTGCCGCTGCTCAAGCGACGACATTGACGGCAAAGGAT
TTAGCGGCAAGATTCGAAAGGACGCTTGGCAGTGGCGGTGACGGGGAGAG
AGGGGGCAAGGGAGCGAAGCGCAGTGCACCAGGAGGGGATTCTCCCTCTG
TGGCGGCTGCTGTGGAAGGAGGGGAAGGAAGAGGAGGAGGAGCAGGGGCA
GGAGGAAAGAGGGCCAAGGTGACTTTTGCTCCGGGTAGCCTGGAGAGCGC
GGTGAGGGAGCGGTTGGTGGGCTTGGGAGGGCGGGTGACGGGGAAGGACC
TGAGCAGGGAGGTGAAGGACTTGTTGAAGCGGCCGAGCGACGTGGACCTG
GTTAAGAGGGTGCTGGCACGCATTTCCACCACCGAGATAGACCCCGTGGA
TGGGGGAAAAATCTACTCCGTGCGCCCGGAGTACCGGTTGGGTTAG
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protein sequence of NO23G00610.1

>NO23G00610.1-protein ID=NO23G00610.1-protein|Name=NO23G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp
MATPLGPPPPSNKPRAPAPSSSRSSSSSSSSSSNTEFDLVRHGPPGDILH
QLIRFDDGEDPFNRGQPPFYCYQEKEEILPDADEASATEPSGKAAKRPPR
APRASVRWTLEDKATITARKHQAEAAAAAAATSGNGEVGNEQQSQQPQGQ
RLLYHGKPLAHAPGTAYVLMVPNRSSTAGGKDGGKGGGRKQIFVVPVGPW
IGYHRVADAVDVPSSVKEAEAMMKAGGGGGAGGGKGRGKKEEEEEQGEEK
LTRRELLERFLTKSRGILDEGGKVGGKVGGKGGKQNSSSGGGLRGRKGVK
MERSHEEGRKGREGPGRRRREGGLGGVDGDIGDDDLAQNADSRELIGLGS
DNEDEYEFQDDEEDKHDETNFHLGEMDEDSSEEEEEEEEEEEEKEADRAL
LCSLAEREEDDEEEEEEEEERKRLVAASAAAQATTLTAKDLAARFERTLG
SGGDGERGGKGAKRSAPGGDSPSVAAAVEGGEGRGGGAGAGGKRAKVTFA
PGSLESAVRERLVGLGGRVTGKDLSREVKDLLKRPSDVDLVKRVLARIST
TEIDPVDGGKIYSVRPEYRLG*
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Synonyms
Publications