NO23G00550, NO23G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G00550 vs. NCBI_GenBank
Match: EWM22980.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 286.6 bits (732), Expect = 1.100e-73 Identity = 143/227 (63.00%), Postives = 167/227 (73.57%), Query Frame = 0 Query: 1 MSSFQRKGHPSSSSSLPFILGDRYVYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQERYNKGGQGGKSVDVIKRLGAVETNGTDSPLFTHKVVVTDCGAWEERG 228 MSSF+ + SLP ILGD YVY DLS+GGVP+GRLVFLLYN VTP+TC NF+ALCTGEKGLS S KKLHYKGS+FHR+IPGFMAQGGD+T +GTGGES+YGPTFPDENFR+ H + GLLSMANAGP TNGSQFFLTF+ TPHL+G HVVFGE +H G++ G G S ++ ++KRL VET G D P+ T +VVVT CG WE G Sbjct: 1 MSSFR-----NDKKSLPAILGDTYVYFDLSVGGVPEGRLVFLLYNHVTPQTCENFRALCTGEKGLSKFSRKKLHYKGSVFHRIIPGFMAQGGDYTAGNGTGGESVYGPTFPDENFRVEHGRAGLLSMANAGPDTNGSQFFLTFRRTPHLDGKHVVFGE-VHREILPGQRAG--HGPSPDLKFK----------ILKRLERVETTGADLPVLTERVVVTGCGEWERGG 209
BLAST of NO23G00550 vs. NCBI_GenBank
Match: ERN01482.1 (hypothetical protein AMTR_s00002p00269760 [Amborella trichopoda]) HSP 1 Score: 216.9 bits (551), Expect = 1.100e-52 Identity = 108/206 (52.43%), Postives = 136/206 (66.02%), Query Frame = 0 Query: 25 VYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQERYNKGGQGGKSVDVIKRLGAVETNGTDSPLFTHKVVVTDCGAWEERGREG 231 V++D+SIGG P G++VF L++ V PKT NF+ALCTGEKG+ ++GK LHYKGSIFHR+I GFMAQGGDF+ DGTGGESIYG F DENF++ H+ PG+LSMANAGP TNGSQFF+TFK T HL+G HVVFG+L+ + +DV+K+ +E GTD TH V + DCG + E G Sbjct: 9 VFLDVSIGGDPAGKMVFELFSDVVPKTAENFRALCTGEKGIGQVTGKPLHYKGSIFHRIIKGFMAQGGDFSRKDGTGGESIYGGKFVDENFKLHHDGPGVLSMANAGPDTNGSQFFITFKSTGHLDGKHVVFGKLV-----------------------------EGMDVLKK---IEQVGTDQGRPTHNVKIVDCGEFIEAKAHG 182
BLAST of NO23G00550 vs. NCBI_GenBank
Match: XP_006838913.2 (peptidyl-prolyl cis-trans isomerase CYP63 [Amborella trichopoda]) HSP 1 Score: 216.9 bits (551), Expect = 1.100e-52 Identity = 108/206 (52.43%), Postives = 136/206 (66.02%), Query Frame = 0 Query: 25 VYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQERYNKGGQGGKSVDVIKRLGAVETNGTDSPLFTHKVVVTDCGAWEERGREG 231 V++D+SIGG P G++VF L++ V PKT NF+ALCTGEKG+ ++GK LHYKGSIFHR+I GFMAQGGDF+ DGTGGESIYG F DENF++ H+ PG+LSMANAGP TNGSQFF+TFK T HL+G HVVFG+L+ + +DV+K+ +E GTD TH V + DCG + E G Sbjct: 14 VFLDVSIGGDPAGKMVFELFSDVVPKTAENFRALCTGEKGIGQVTGKPLHYKGSIFHRIIKGFMAQGGDFSRKDGTGGESIYGGKFVDENFKLHHDGPGVLSMANAGPDTNGSQFFITFKSTGHLDGKHVVFGKLV-----------------------------EGMDVLKK---IEQVGTDQGRPTHNVKIVDCGEFIEAKAHG 187
BLAST of NO23G00550 vs. NCBI_GenBank
Match: GAQ86678.1 (cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Klebsormidium nitens]) HSP 1 Score: 209.5 bits (532), Expect = 1.700e-50 Identity = 103/201 (51.24%), Postives = 131/201 (65.17%), Query Frame = 0 Query: 21 GDRYVYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQERYNKGGQGGKSVDVIKRLGAVETNGTDSPLFTHKVVVTDCG 222 G+ +V+ D+SIG GR+V LY V P+T NF+ALCTGEKGL +GK L YKGSIFHR+IPGFM QGGDF+N +GTGGESIYG F DENF + HN PG+LSMANAGP+TNGSQFF+ FK TPHL+G HVVFG+++ + +D++KR+ V T+ D P+ + V + DCG Sbjct: 5 GNPHVFFDVSIGTQNAGRIVIELYADVVPRTAENFRALCTGEKGLGKTTGKALTYKGSIFHRIIPGFMMQGGDFSNKNGTGGESIYGAKFADENFTLSHNGPGVLSMANAGPNTNGSQFFICFKKTPHLDGKHVVFGKVV-----------------------------EGLDIVKRIEEVPTDAKDRPM--NPVTIKDCG 174
BLAST of NO23G00550 vs. NCBI_GenBank
Match: SGZ49629.1 (CIC11C00000005016 [[Candida] intermedia]) HSP 1 Score: 209.1 bits (531), Expect = 2.200e-50 Identity = 101/155 (65.16%), Postives = 117/155 (75.48%), Query Frame = 0 Query: 25 VYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQ 180 V+ DLS GGVP+GR+VF LYN V PKT NF+ALCTGEKG S SG KLHYKGS FHRVI FM QGGDFT+ G GGESIYG F DENF++ H+KP LLSMANAGP TNGSQFF+T PTPHLNG HVVFGE++ + + E +KG + + Sbjct: 4 VFFDLSEGGVPKGRVVFQLYNDVVPKTTENFRALCTGEKGESAKSGAKLHYKGSTFHRVIKDFMCQGGDFTHGTGVGGESIYGEKFEDENFKLNHDKPFLLSMANAGPGTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQMERCEKGANDK 158
BLAST of NO23G00550 vs. NCBI_GenBank
Match: SGZ53294.1 (CIC11C00000005625 [[Candida] intermedia]) HSP 1 Score: 208.8 bits (530), Expect = 2.900e-50 Identity = 101/155 (65.16%), Postives = 117/155 (75.48%), Query Frame = 0 Query: 25 VYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQ 180 V+ DLS GGVP+GR+VF LYN V PKT NF+ALCTGEKG S SG KLHYKGS FHRVI FM QGGDFT+ G GGESIYG F DENF++ H+KP LLSMANAGP TNGSQFF+T PTPHLNG HVVFGE++ + + E +KG + + Sbjct: 4 VFFDLSEGGVPKGRVVFQLYNDVVPKTTENFRALCTGEKGESAKSGAKLHYKGSTFHRVIKDFMCQGGDFTHGTGVGGESIYGEKFEDENFKLNHDKPFLLSMANAGPGTNGSQFFITTVPTPHLNGKHVVFGEVVQGKSIVRQMERCEKGANDK 158
BLAST of NO23G00550 vs. NCBI_GenBank
Match: XP_013753092.1 (peptidyl-prolyl cis-trans isomerase D [Thecamonas trahens ATCC 50062] >KNC55269.1 peptidyl-prolyl cis-trans isomerase D [Thecamonas trahens ATCC 50062]) HSP 1 Score: 208.4 bits (529), Expect = 3.800e-50 Identity = 110/200 (55.00%), Postives = 128/200 (64.00%), Query Frame = 0 Query: 22 DRYVYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQERYNKGGQGGKSVDVIKRLGAVETNGTDSPLFTHKVVVTDCG 222 D + D+SIGGVP GR+VF LY +TPKT NF+ALCTGEKG+ SGK L YKGS FHRVI FM QGGDFTN +GTGGESIYG F DENF + H KPGLLSMANAGP TNGSQFF+T PTPHL+G HVVFGE+L K + V++ + A+ET D P+ VV+ DCG Sbjct: 8 DVRTFFDISIGGVPAGRIVFKLYTDITPKTSENFRALCTGEKGVGE-SGKALSYKGSTFHRVIEDFMIQGGDFTNHNGTGGESIYGAKFEDENFEVMHTKPGLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVL-----------------------------KGMGVVREIEALET-ADDRPI--DAVVIEDCG 174
BLAST of NO23G00550 vs. NCBI_GenBank
Match: XP_002618818.1 (hypothetical protein CLUG_02277 [Clavispora lusitaniae ATCC 42720] >EEQ38154.1 hypothetical protein CLUG_02277 [Clavispora lusitaniae ATCC 42720]) HSP 1 Score: 207.6 bits (527), Expect = 6.500e-50 Identity = 98/155 (63.23%), Postives = 118/155 (76.13%), Query Frame = 0 Query: 25 VYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQ 180 V+ D++ GG P+GR+VF LYN V PKT NF+AL TGEKG S +SGK LHYKGSIFHRVI FM QGGDFT+ G GGESIYG F DENF++ H+KP LLSMANAGP+TNGSQFF+T PTPHLNG HVVFGE++ + + E +KG + + Sbjct: 4 VFFDITAGGKPKGRIVFKLYNDVVPKTAENFRALATGEKGNSSVSGKPLHYKGSIFHRVIKDFMCQGGDFTHGTGVGGESIYGEKFEDENFKLTHDKPFLLSMANAGPNTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQMERCEKGANDK 158
BLAST of NO23G00550 vs. NCBI_GenBank
Match: OVF10234.1 (putative peptidyl-prolyl cis-trans isomerase [Clavispora lusitaniae]) HSP 1 Score: 207.2 bits (526), Expect = 8.500e-50 Identity = 98/155 (63.23%), Postives = 118/155 (76.13%), Query Frame = 0 Query: 25 VYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQ 180 V+ D++ GG P+GR+VF LYN V PKT NF+AL TGEKG S +SGK LHYKGSIFHRVI FM QGGDFT+ G GGESIYG F DENF++ H+KP LLSMANAGP+TNGSQFF+T PTPHLNG HVVFGE++ + + E +KG + + Sbjct: 4 VFFDITAGGKPKGRIVFKLYNDVVPKTAENFRALATGEKGNSSVSGKPLHYKGSIFHRVIKDFMCQGGDFTHGTGIGGESIYGEKFEDENFKLTHDKPFLLSMANAGPNTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQMERCEKGANDK 158
BLAST of NO23G00550 vs. NCBI_GenBank
Match: XP_018713566.1 (hypothetical protein METBIDRAFT_9397 [Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993] >OBA23085.1 hypothetical protein METBIDRAFT_9397 [Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993]) HSP 1 Score: 206.8 bits (525), Expect = 1.100e-49 Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 0 Query: 25 VYMDLSIGGVPQGRLVFLLYNFVTPKTCANFQALCTGEKGLSPLSGKKLHYKGSIFHRVIPGFMAQGGDFTNADGTGGESIYGPTFPDENFRIPHNKPGLLSMANAGPHTNGSQFFLTFKPTPHLNGVHVVFGELLHTHPPLGRKEGSQKGGSSQ--ERYNKGGQGGKSVDVIKRLGAVETNGT 207 V+ DL+ G+P+GR+VF LYN V PKT NF+ALCTGEKG S SGK LHYKGS FHRVI FM QGGDFT+ G GGESIYG F DENF++ H+KP LLSMANAGP+TNGSQFF+T PTPHLNG HVVFGE++ + E +KG + E + G D + AV +GT Sbjct: 4 VFFDLTANGIPKGRVVFKLYNDVVPKTTENFRALCTGEKGNSAESGKPLHYKGSTFHRVIKSFMCQGGDFTHGTGIGGESIYGNKFEDENFKLTHDKPFLLSMANAGPNTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSVVRELERCEKGDGDKPTEDWVIADCGELPADYVPEASAVSDDGT 187 The following BLAST results are available for this feature:
BLAST of NO23G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00550 ID=NO23G00550|Name=NO23G00550|organism=Nannochloropsis oceanica|type=gene|length=1698bpback to top protein sequence of NO23G00550.1 >NO23G00550.1-protein ID=NO23G00550.1-protein|Name=NO23G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=364bpback to top Synonyms
Publications
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