NO23G00520, NO23G00520 (gene) Nannochloropsis oceanica

Overview
NameNO23G00520
Unique NameNO23G00520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4272
Alignment locationchr23:219166..223437 -

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Properties
Property NameValue
DescriptionATP synthase gamma chain
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:219166..223437 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
GO:0016020membrane
GO:0009536plastid
Vocabulary: INTERPRO
TermDefinition
IPR035968ATP_synth_F1_ATPase_gsu
IPR000131ATPase_F1-cplx_gsu
Homology
BLAST of NO23G00520 vs. NCBI_GenBank
Match: Q06908.1 (RecName: Full=ATP synthase gamma chain, chloroplastic; AltName: Full=F-ATPase gamma subunit; Flags: Precursor >CAA49993.1 adenosinetriphosphatase [Trieres chinensis])

HSP 1 Score: 363.2 bits (931), Expect = 1.200e-96
Identity = 210/369 (56.91%), Postives = 261/369 (70.73%), Query Frame = 0
Query:   44 FALSLLFAGANAFQAPFFSRAASNSRSLRTNDFTTVQSFEPSALPTVPRGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIR-SFDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            F ++ L A A AFQA     AA  + S      T+    E S+     R  TI MDGK+NAIR RI SVK+TKKIT AM+LVAAAKVRRAQ+AVL+TRPF+E LQSVF GL+ R+  E ++LPLL  R V  VT+V +TGDRGLCGGYN+ MIK+ E R  ELK QG+  +++ IG KG TYF+ R  PIR +F+ GQ P    A AI+EELL+ YLSGE D VE LYT+FI+LI S PS RT++P  A  I  Q DE+F +T+  G    E++    A  +D   D+IFEQDPIQI+N+ILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA +LA +LS  YNRARQ+A+T EI EIV+GAS++
Sbjct:    4 FCVAGLLASAAAFQA---QPAAFTTYSPAVGGATSNVFSESSSPAHRNRRATIVMDGKANAIRDRITSVKNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIARMGGEALDLPLLTQREVSKVTLVVITGDRGLCGGYNSFMIKKAEARFNELKDQGVACDMVLIGKKGITYFQRRGYPIRKTFETGQNPDSKQALAISEELLNTYLSGESDAVELLYTKFISLIASSPSARTLIPFSASEITQQGDEVFQLTSSGGDFEVERTELEVAEPQDFPNDMIFEQDPIQIINSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGDLAKRLSTEYNRARQAAVTQEILEIVSGASAL 369          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: CBN76659.1 (ATP synthase gamma chain [Ectocarpus siliculosus])

HSP 1 Score: 361.3 bits (926), Expect = 4.400e-96
Identity = 203/366 (55.46%), Postives = 261/366 (71.31%), Query Frame = 0
Query:   52 GANAFQAPFFSRAASNSRSLRTNDFTTVQSFEPSALPTVPRGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNR---FPPIRSFDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSVGGG 415
            G+ A  + F   A ++   +R  D        P+    V    T  M GK NAIR RIV+V +TKKIT AMRLVAAAKVRRAQ+AVL TRPF+E LQS+F  L+ +L  EN++LPLL  R VK+V +V ++GDRGLCG YN+  IK+TE R  EL +QG  V  +TIG K   YFK R   +   R+FD GQAP+ A ASAIA+ELLS+YLSGE D VE +YT+F++LI SEPSIRT+LPL  +GIED++DEIF +TT  GK   ++  + P    ++  D+IFEQDPIQILN+ILPLY++GQ+LRMLQESVA+EL ARMA+M +ASDNA +LA +LS+ YNRARQ+++T E+ EIVAGA +   G
Sbjct:   13 GSAACASAFMGPAVTSFSGVRVVDNVDAVVASPARRSVV----TPRMGGKENAIRQRIVTVNNTKKITTAMRLVAAAKVRRAQDAVLRTRPFSETLQSIFGALIAQLGKENLDLPLLNAREVKNVLLVGLSGDRGLCGAYNSYAIKKTEARGNELTAQGYNVEYVTIGKKISQYFKRRSDTYTVKRAFDCGQAPNAAEASAIAQELLSDYLSGEFDSVEIVYTKFVSLIASEPSIRTLLPLSIRGIEDETDEIFQLTTQGGKFTVDREEAEPVENAEIPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAADLAKRLSLQYNRARQASVTQELLEIVAGADAAQSG 374          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: AAO43198.1 (chloroplast ATPase gamma subunit precursor [Phaeodactylum tricornutum])

HSP 1 Score: 358.2 bits (918), Expect = 3.700e-95
Identity = 202/372 (54.30%), Postives = 267/372 (71.77%), Query Frame = 0
Query:   43 AFALSLLFAGANAF--QAPFFSRAASNSRSLRTNDFTTVQSFEPSALPTVPRGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIR-SFDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            +F ++ LFA A+AF  Q   F+   +N     +  F    S   +      R  TI MDGK+NAIR RI SVK+T+KIT AM+LVAAAKVRRAQ+AVL+TRPF+E LQSVF GL++RL  E+++LPLL +R VK VT++ +TGDRGLCGGYN+ MIK+ E R  ELK  G+  +LI +G KG  YF+ R  PIR  ++ GQ P+   A AIAEE+ S +LSGE D VE LYT+F++LI S PSIRT++P  A  I  + DE+F +T++ G+   E++    AA ++   D+IFEQDPIQI+NAILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA  LA +L++ YNRARQ+A+T E+ EI++GAS++
Sbjct:    3 SFCIAALFAVASAFTTQPTSFTVKTANVGERASGVFPEQSSAHRT------RKATIVMDGKANAIRDRITSVKNTRKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIQRLGGESVDLPLLTEREVKKVTLLVITGDRGLCGGYNSFMIKKAEARFKELKKNGVEADLILVGKKGIAYFERRGYPIRKKYETGQNPTAKQALAIAEEVSSTFLSGESDAVELLYTKFVSLIASSPSIRTLVPFSASDITAKGDEVFQLTSESGQFGVERTELDVAAPQEFPNDMIFEQDPIQIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGSLAKQLNLEYNRARQAAVTQELLEIISGASAL 368          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: XP_002180505.1 (precursor of ATPase ATPase gamma subunit [Phaeodactylum tricornutum CCAP 1055/1] >EEC47913.1 precursor of ATPase ATPase gamma subunit [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 355.5 bits (911), Expect = 2.400e-94
Identity = 201/372 (54.03%), Postives = 266/372 (71.51%), Query Frame = 0
Query:   43 AFALSLLFAGANAF--QAPFFSRAASNSRSLRTNDFTTVQSFEPSALPTVPRGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNR-FPPIRSFDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            +F ++ L A A+AF  Q   F+   +N     +  F    S   +      R  TI MDGK+NAIR RI SVK+T+KIT AM+LVAAAKVRRAQ+AVL+TRPF+E LQSVF GL++RL  E+++LPLL +R VK VT++ +TGDRGLCGGYN+ MIK+ E R  ELK  G+  +LI +G KG  YF+ R FP  + ++ GQ P+   A AIAEE+ S +LSGE D VE LYT+F++LI S PSIRT++P  A  I  + DE+F +T++ G+   E++    AA ++   D+IFEQDPIQI+NAILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA  LA +L++ YNRARQ+A+T E+ EIV+GAS++
Sbjct:    3 SFCIAALLAVASAFTTQPTSFTVKTANVGERASGVFPEQSSAHRT------RKATIVMDGKANAIRDRITSVKNTRKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIQRLGGESVDLPLLTEREVKKVTLLVITGDRGLCGGYNSFMIKKAEARFNELKKNGVEADLILVGKKGIAYFERRGFPIRKKYETGQNPTAKQALAIAEEVSSTFLSGESDAVELLYTKFVSLIASSPSIRTLVPFSASDITAKGDEVFQLTSESGQFGVERTELDVAAPQEFPNDMIFEQDPIQIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGSLAKQLNLEYNRARQAAVTQELLEIVSGASAL 368          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: EJK68017.1 (hypothetical protein THAOC_10857 [Thalassiosira oceanica])

HSP 1 Score: 352.1 bits (902), Expect = 2.700e-93
Identity = 193/351 (54.99%), Postives = 251/351 (71.51%), Query Frame = 0
Query:   73 TNDFTTVQSFEPSALPTVP-----------RGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIRS-FDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            T+ FTTV S +    P  P           R  TI MDGK+NAIR RI SV +TKKIT AM+LVAAAKVRRAQ+AVL+TRPF+E LQSVF GL++RL  E ++LPLL  R V  VT+V +TGDRGLCGGYN+ MIK+ E R  ELK+QG+  ++I IG KG +YF+ R  PIR+ +D  Q P    A  I+EE+++ +L+GE D VE LYT+F++LI+S PS+RT++P  A  I ++ DE+F +T+  G    E+     A  ++   D+IFEQDP+QI+N+ILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA  LA  LS  YNRARQ+A+T E+ EIVAGA+++
Sbjct:   14 TSAFTTVPSHQTVLAPAAPADVFAPATHRTRRSTIVMDGKANAIRDRITSVNNTKKITSAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIQRLGGEAVDLPLLTQREVNKVTLVVITGDRGLCGGYNSFMIKKAEARFNELKAQGIEADMILIGKKGASYFQRREFPIRAIYDCTQNPDSKQALGISEEIINSFLAGETDAVELLYTKFVSLISSTPSVRTLVPFSASEITNKGDEVFQLTSAGGDFGVERKELDVAEPQEFPNDMIFEQDPLQIVNSILPLYLNGQILRTLQESVASELAARMQSMQSASDNASALAKTLSQEYNRARQAAVTQELLEIVAGAAAL 364          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: XP_002289138.1 (ATP synthase [Thalassiosira pseudonana CCMP1335] >EED92675.1 ATP synthase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 350.5 bits (898), Expect = 7.800e-93
Identity = 187/321 (58.26%), Postives = 237/321 (73.83%), Query Frame = 0
Query:   92 RGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIRS-FDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            R  TI MDGK+NAIR RI SV +TKKIT AM+LVAAAKVRRAQ++VL+TRPF+E LQSVF GL+ RL  E  +LPLL  R V  VT+  +TGDRGLCGGYN+ MIK+ E R  EL +QG+  + I IG KG +YF  R  PIR  FD GQ P+   A AI+EE+++ +LSGE D VE LYT+F++LI S PS+RT++P  A  I  + DE+F +T+  G    E+     A  +D   D+IFEQDP+QI+N+ILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA+ LA +LS  YNRARQ+A+T EI EIV+GA+++
Sbjct:   46 RRATIVMDGKANAIRDRITSVNNTKKITSAMKLVAAAKVRRAQDSVLATRPFSETLQSVFGGLINRLGGEAADLPLLTQREVNKVTITVITGDRGLCGGYNSFMIKKAEARYKELTAQGIECDFILIGKKGASYFARREYPIRKVFDCGQNPNSKEALAISEEIINSFLSGETDAVELLYTKFVSLIASSPSVRTLVPFSASEISQKGDEVFQLTSQDGDFGVERKELEVAEPQDFPNDMIFEQDPLQIVNSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAKALAKRLSQEYNRARQAAVTQEILEIVSGATAL 366          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: OEU16307.1 (chloroplast ATPase gamma subunit precursor [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 350.5 bits (898), Expect = 7.800e-93
Identity = 198/369 (53.66%), Postives = 261/369 (70.73%), Query Frame = 0
Query:   44 FALSLLFAGANAFQAPFFSRAASNSRSLRTNDFTTVQSFEPSALPTVPRGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIRS-FDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            F L+   A ANAF     S  A+ + S+       + +    +     R  TI MDGK+NAIR RI SVK+TKKIT AM+LVAAAKVRRAQ+AVL+TRPF+E LQSVF GL+ RL  E ++LPLL  R VK VT+  +TGDRGLCGGYN+ MIK+ E R  EL +QG+ V+++ IG+KG  YF+ R  PIR+ F+ GQ P+   A AI+EELL+ +LSGE D +E LYT+F++LI S P++RT++P  A  I    DE+F +T++ G+   E++    A  ++   D+IFEQDP+QI+N+ILPLY+NGQVLR LQESVASEL ARM +MQSASDNA  L  +LS+ YNRARQ+A+T E+ EIVAGA ++
Sbjct:    4 FCLAAFLATANAFT----SGPAAFTTSVPAVGGRALDNVVAPSQSHANRRATIVMDGKANAIRDRISSVKNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIARLGGEAMDLPLLTQREVKKVTLTVVTGDRGLCGGYNSFMIKKAEARYKELTAQGIEVDMVLIGVKGIAYFERRKFPIRAKFECGQNPNAKDALAISEELLNTFLSGETDAIELLYTKFVSLIASVPAVRTLVPFSASDITQTGDEVFQLTSESGEFSVERTELAVAEPQEFPNDMIFEQDPLQIVNSILPLYLNGQVLRTLQESVASELAARMQSMQSASDNAGALEKELSLQYNRARQAAVTQELLEIVAGAMAL 368          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: Q41075.1 (RecName: Full=ATP synthase gamma chain, chloroplastic; AltName: Full=F-ATPase gamma subunit; Flags: Precursor >AAA73506.1 AtpC [Phaeodactylum tricornutum])

HSP 1 Score: 348.6 bits (893), Expect = 3.000e-92
Identity = 199/373 (53.35%), Postives = 265/373 (71.05%), Query Frame = 0
Query:   43 AFALSLLFAGANAF--QAPFFSRAASNSRSLRTNDFTTVQSFEPSALPTVPRGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLV-AAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNR-FPPIRSFDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            +F ++ L A A+AF  Q   F+   +N     +  F    S   +      R  TI MDGK+NAIR RI SVK+T+KIT AM+LV AA KVRRAQ+AVL+TRPF+E LQSVF GL++RL  E+++LPLL +R VK VT++ +TGDRGLCGGYN+ MIK+ E R  ELK  G+  +LI +G KG  YF+ R FP  + ++ GQ P+   A AIAEE+ S +LSGE D VE LYT+F++LI S PSIRT++P  A  I  + DE+F +T++ G+   E++    AA ++   D+IFEQDPIQI+NAILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA  LA +L++ YNRARQ+A+T E+ EI++GAS++
Sbjct:    3 SFCIAALLAVASAFTTQPTSFTVKTANVGERASGVFPEQSSAHRT------RKATIVMDGKANAIRDRITSVKNTRKITMAMKLVRAAPKVRRAQDAVLATRPFSETLQSVFGGLIQRLGGESVDLPLLTEREVKKVTLLVITGDRGLCGGYNSFMIKKAEARFNELKKNGVEADLILVGKKGIAYFERRGFPIRKKYETGQNPTAKQALAIAEEVSSTFLSGESDAVELLYTKFVSLIASSPSIRTLVPFSASDITAKGDEVFQLTSESGQFGVERTELDVAAPQEFPNDMIFEQDPIQIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGSLAKQLNLEYNRARQAAVTQELLEIISGASAL 369          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: GAX26882.1 (F-type H+-transporting ATPase subunit gamma [Fistulifera solaris])

HSP 1 Score: 347.1 bits (889), Expect = 8.600e-92
Identity = 185/321 (57.63%), Postives = 243/321 (75.70%), Query Frame = 0
Query:   92 RGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIR-SFDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            R  T+  DGK+NAIR RI +VK+T KIT+AM+LVAAAKVRRAQ+AVL+TRPF+E LQSVF GL++RL  E ++LPLL  R VK VT+  +TGDRGLCGGYN+ MIK+ E R A+LK  G+ V+++ +G KG  YF+ R  PIR +F  GQ PS   A AI++ELL+ +LSGE D VE  YT+F +LI+S PS+RT++P  A  I  ++DE+F +T+D G     +     AA ++   D+IFEQDP+QI+N+ILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA +LA  L++ YNRARQ+A+T EI EIV+GAS++
Sbjct:   28 RQATVVFDGKANAIRDRIKNVKNTGKITKAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIQRLDGEAVDLPLLTQREVKKVTLTVITGDRGLCGGYNSFMIKKAEARFAQLKKSGVDVDMVLVGNKGIKYFQRRNYPIRKTFQTGQNPSAKQALAISDELLNTFLSGESDAVELFYTKFESLISSSPSVRTLVPFSASDITQKADEVFQLTSDHGAFGVTREELDVAAPQEFPNDMIFEQDPLQIVNSILPLYLNGQILRCLQESVASELAARMQSMQSASDNASQLAKSLTLEYNRARQAAVTQEILEIVSGASAL 348          
BLAST of NO23G00520 vs. NCBI_GenBank
Match: BAP91042.1 (precursor of ATPase gamma subunit [Fistulifera solaris] >GAX11086.1 F-type H+-transporting ATPase subunit gamma [Fistulifera solaris])

HSP 1 Score: 346.3 bits (887), Expect = 1.500e-91
Identity = 185/321 (57.63%), Postives = 243/321 (75.70%), Query Frame = 0
Query:   92 RGLTITMDGKSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSVFSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTERRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIR-SFDMGQAPSPATASAIAEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDEIFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYINGQVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNEICEIVAGASSV 412
            R  T+  DGK+NAIR RI +VK+T KIT+AM+LVAAAKVRRAQ+AVL+TRPF+E LQSVF GL++RL  E ++LPLL  R VK VT+  +TGDRGLCGGYN+ MIK+ E R A+LK  G+ V+++ +G KG  YF+ R  PIR +F  GQ PS   A AI++ELL+ +LSGE D VE  YT+F +LI+S PS+RT++P  A  I  ++DE+F +T+D G     +     AA ++   D+IFEQDP+QI+N+ILPLY+NGQ+LR LQESVASEL ARM +MQSASDNA +LA  L++ YNRARQ+A+T EI EIV+GAS++
Sbjct:   28 RQATVVYDGKANAIRDRIKNVKNTGKITKAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIQRLDGEAVDLPLLTQREVKKVTLTVITGDRGLCGGYNSFMIKKAEARFAQLKKSGVDVDMVLVGNKGIKYFQRRNYPIRKTFPTGQNPSAKQALAISDELLNTFLSGESDAVELFYTKFESLISSSPSVRTLVPFSASDITQKADEVFQLTSDHGAFGVTREELDVAAPQEFPNDMIFEQDPLQIVNSILPLYLNGQILRCLQESVASELAARMQSMQSASDNASQLAKSLTLEYNRARQAAVTQEILEIVSGASAL 348          
The following BLAST results are available for this feature:
BLAST of NO23G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
Q06908.11.200e-9656.91RecName: Full=ATP synthase gamma chain, chloroplas... [more]
CBN76659.14.400e-9655.46ATP synthase gamma chain [Ectocarpus siliculosus][more]
AAO43198.13.700e-9554.30chloroplast ATPase gamma subunit precursor [Phaeod... [more]
XP_002180505.12.400e-9454.03precursor of ATPase ATPase gamma subunit [Phaeodac... [more]
EJK68017.12.700e-9354.99hypothetical protein THAOC_10857 [Thalassiosira oc... [more]
XP_002289138.17.800e-9358.26ATP synthase [Thalassiosira pseudonana CCMP1335] >... [more]
OEU16307.17.800e-9353.66chloroplast ATPase gamma subunit precursor [Fragil... [more]
Q41075.13.000e-9253.35RecName: Full=ATP synthase gamma chain, chloroplas... [more]
GAX26882.18.600e-9257.63F-type H+-transporting ATPase subunit gamma [Fistu... [more]
BAP91042.11.500e-9157.63precursor of ATPase gamma subunit [Fistulifera sol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00520.1NO23G00520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|195044gene_8395Nannochloropsis oceanica (N. oceanica CCMP1779)gene
AtpCgene7466Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00520.1NO23G00520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00520 ID=NO23G00520|Name=NO23G00520|organism=Nannochloropsis oceanica|type=gene|length=4272bp
CCCTCGTCAACAACCTTTGGGTGAGAGGCGACGACGACGAGGAGAGAAGA
GATCCTCGAGGACGTGCGGCTTGGTCGTTGGCATGTGTGGGGGTATCTCC
ACGCTGTCTGTGCGGTGGCTATGCGTCGCTCCCTAATTATTAAATTCATG
TTGCCCCTCTGGGCTGCCTGCCACCCATTGCTCACCGTTCACGGATTTGG
ACACCAGCAGCAACAGCAGCAGCAACAAGCAAGCCAAAGGAAGTCGATAC
ACACGCCCTGGCCTCGCCTTTCCTCCTCCCCGTATTGTTGTTGCAGCTCC
TGTGGCTATCACCCTGCATTAAAGACACCTATGCATGCTACAGCGCGGCT
TCATTTAGCTGCAGTCCAATCTCGGGGAAGGCAGCCGCCAGGGCAAGCAG
CTCGCACTCCCCCTCCCCCCTCCTCCACTCCGGCATGGGGTGGATGTTGC
AGCCTTGTTTCCTCTTATTCGAATGCCCTATCTTACCGGCATATGAATTC
TCACTCACACATGCTCACACACATGCACGTATTCAAATTTACGCAGAGAG
GATGAAGACCGCCTTTGCTTTAAGCCTACTCTTTGCGGGTGCGAATGCCT
TTCAGgtacgacagaaacgatgaagtggggagggaggaaggaaaggattg
aggtgtggagacgacaaggaagtagttcgaaagagagagaaggagagaca
taggagggcctgccttcagtgcggtatgggcgcggaggcgaaggccagat
agagacgaaagagcatggaggagaagaaggcaccagcggcacgccgacaa
gtgaggaggatgtgacaacttcttctttgctgattatctaatggagtgcg
gtgggcgggacatgagaagaggcgaggaaggaagcgagggagggagggga
agaagacgagatgcagaagcagtagatatcaggacgtcgtcaaagctgct
gctgctgcgactgctgctgcttcgtccctgtctttcttgaagcaatgatg
cttttgtcacgtcatctcttttcttgaccagaggcaaggtggattgtcag
agtgctcacacattcctccctccctccctccttccttccttccctccatt
ccgcccagGCTCCCTTCTTCTCCCGCGCCGCCTCCAACAGCCGCTCCCTG
CGCACGAACGATTTCACCACCGTGCAGTCCTTCGAGCCCTCCGCGCTTCC
TACCGTCCCCCGGGGCCTGACCATCACCATGGACGGCAAGTCCAACGCAA
TCCGTGGGCGCATCGTGTCAGTGAAGAGCACCAAGAAGATCACGGAGGCC
ATGCGTCTCGTCGCCGCCGCCAAGgtacgccctccctctctccatttctc
ttaatctttcgtgtcccagcattgctgtccatcagggcacgtgatccgtc
tacgcatcaattaaattaccctgcagttaatgaacctaaaccatgaatcc
acctcaaggccaaatcaaaaccctgaccctccgagactcaactccaccac
aaccacccacccatccctaccctacccctgccccctaatcccacagGTGC
GACGTGCTCAAGAAGCCGTGCTCTCTACGCGCCCGTTCAATGAGGGCCTG
CAGTCGGTCTTCTCGGGCCTGGTGAAGCGCTTGGCTCTTGAGAACATCGA
GCTCCCCCTCCTCCAAGACCGTGCCGTCAAGTCCGTCACTGTCGTCTGCA
TGACGGGCGACAGgtacgtccgcttgctataccctccctccctccctccc
ttctctcccttctctccctccctccctccctccctccctccactcctcct
tccctccttctctttcttctcgctcggtctcgacggccaagcctgtcatt
cagatacatccgagacatgcccctccttaccttcgataagacacatgcct
ttcccccagctccccttcactgcatcctccctccttccctccttccttcc
tgcagGGGTCTGTGCGGCGGGTACAATGCCAAGATGATCAAGCAGACGGA
GAGGCGCCTGGCCGAGCTCAAGAGCCAGGGTCTCAGGGTCAACCTCATCA
CCATCGGGATGAAGGGACAGACTTgtacgtactccccttgcccgccctcc
ctccctccctccccatcaccatgccttccttgtcgcatgcgtcctcattc
gaccacgcgtgttcccctccctctctgtttcccccccccccccccccccc
ccccctaacccaaatccgggcacccactcacctcccccccctctcctccc
tccctccctccctccctccctagACTTCAAGAACCGCTTCCCTCCCATCC
GCTCCTTTGACATGGGCCAGGCTCCGTCCCCCGCCACGGCCTCTGCCATC
GCCGAGGAGCTTCTGTCTGAGTACCTTTCGGGGgtaaggattgagggagg
gagggagggagggagggagggagggaaggagggagggagggaggggcagt
gtgagtgtggtaggctggcacgtttccccactgttgcttctgtcgttgtt
attcccaggaatcggtgatctctatcggtgatatctgagtgcttgttggg
aatgctccctcaaggccgtctccctcttctgacacccccatatgcctcca
gcctcgctgctaaactcgttcttatgcacccgcacccactcattccccct
ttctccctccctccttccctccgtatctcattggtctctacagGAGGTGG
ACCGCGTGGAGTTTCTGTACACGCGCTTCATCAACCTCATCACGTCGGAG
CCCTCGATCCGCACCGTCCTCCCTCTCAAGGCACAGGGCATTGAAGATCA
GAGCGATGAGATCTTCACCATGACCACCGgtacgaatgcccctccctccc
acccttcctcgctccctccctcccttccttcctgctcttgttccgtccac
agaaacaagagtgagatattcggtgttttgcaatttgatggccagtattc
accttccttccccccctctctccctccctcccaccctccctcccttagAC
AAGGGGAAGGTGGTGGGCGAGAAATCCTCGTCCCCGCCCGCGGCTGCCGA
GGATTTGTTCGGTGACGTGATTTTCGAGCAAGACCCGATCCAGATCCTCA
ACGCTATCCTCCCCCTCTACATCAACGGACAAGgtaaccccccctccctc
cctccctccctgctgcctgcctgtagaggtctatcacggaggtcgtctcg
tcgagccgttttgccctgtctgacacccacacataccacatatcctcccg
cctgaagcatctctttccacaccctcacctccccctccctccctccctcc
ctccctccccccctccctcccagTCCTGCGCATGCTCCAAGAGTCGGTGG
CCTCGGAGCTGGGGGCCCGTATGGCGGCCATGCAGTCCGCGTCCGACAAC
GCCGAGGAGCTGGCGGACAAGCTCTCCGTCATCTACAACAGGgtatgtca
tccctccctccctctctccctccctccctccctttttcgcagctgccctc
tcctcttccctcttccctcttccacccgatggtggtagcaaaacctcaag
taggcctgtatgtcgatctcccaacgccaatgaaaggcctcttcgtacgt
ctgtcagatcaatattccacccgtgtttgtgttgacccacctgtaataaa
acatatccccttcttgagagactcgccattatgatcgtaatacacaaagg
ggggggctcggctactactcttaaactgaatttcgtgaatttcttccatg
tttcccttcctcccctccatgcacacactcaccctctacctccaatcgtc
cttttccatgcacccccagGCGCGTCAATCGGCCATCACCAACGAGATTT
GCGAGATCGTGGCCGGTGCCTCCAGCGTCGGGGGGGGAGACGGAAATGCC
AAGGACTTGTTGGCGTTTGAATACGAGAACGGGGATGAATTCGAGGGGGA
GCGCATCAGGGAGTTCGCGGACTGGTTCAAGGATTTGGACGAGTACAAGG
AGGGTTTGTTGGAGGACGCGTAAAGACTCGAAAGCTGCGTGGAGGAGAGG
GGGAGGGGTGGAGGGAGGGAGGGGTTGGAGGGTAGGCTGTTGAGGAGGCG
GTGGGTGTGTCTGGGAGTGGCGGGAGGGAAAAGAGGAAGATTGTATGTGT
GTGCGTGTGAATGTACGTGTGTCGTATCTTTGCGATGGTTCGAAGGCACC
AAATGGTTTTGTGAGTGCCTCTCCTCTGGATGGGGAGGGGGCAGGAGGGA
GGGAGGGAGGGAGGGAGGGAAT
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protein sequence of NO23G00520.1

>NO23G00520.1-protein ID=NO23G00520.1-protein|Name=NO23G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=459bp
MGWMLQPCFLLFECPILPAYEFSLTHAHTHARIQIYAERMKTAFALSLLF
AGANAFQAPFFSRAASNSRSLRTNDFTTVQSFEPSALPTVPRGLTITMDG
KSNAIRGRIVSVKSTKKITEAMRLVAAAKVRRAQEAVLSTRPFNEGLQSV
FSGLVKRLALENIELPLLQDRAVKSVTVVCMTGDRGLCGGYNAKMIKQTE
RRLAELKSQGLRVNLITIGMKGQTYFKNRFPPIRSFDMGQAPSPATASAI
AEELLSEYLSGEVDRVEFLYTRFINLITSEPSIRTVLPLKAQGIEDQSDE
IFTMTTDKGKVVGEKSSSPPAAAEDLFGDVIFEQDPIQILNAILPLYING
QVLRMLQESVASELGARMAAMQSASDNAEELADKLSVIYNRARQSAITNE
ICEIVAGASSVGGGDGNAKDLLAFEYENGDEFEGERIREFADWFKDLDEY
KEGLLEDA*
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Synonyms
Publications