NO23G00490, NO23G00490 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO23G00490
Unique Name	NO23G00490
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4264
Alignment location	chr23:208467..212730 +

Link to JBrowse

Properties


Property Name	Value
Description	Calnexin

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr23	genome	chr23:208467..212730 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0051082	unfolded protein binding
GO:0005509	calcium ion binding
GO:0051082	unfolded protein binding
GO:0005509	calcium ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum
GO:0016021	integral component of membrane
GO:0016020	membrane
GO:0005783	endoplasmic reticulum

Vocabulary: **INTERPRO**
Term	Definition
IPR013320	ConA-like_dom
IPR009033	Calreticulin/calnexin_P_dom
IPR001580	Calret/calnex

Homology

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: CAB92410.1 (calreticulin-like protein [Tritrichomonas suis])

HSP 1 Score: 234.6 bits (597), Expect = 7.200e-58
Identity = 120/240 (50.00%), Postives = 158/240 (65.83%), Query Frame = 0

Query:    7 LAFLF-------LASSSTLVPVASAEDALFLETFQGKPDPLSNWHLSKQDKYVEQPVEVSSSKVP-GMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDE 239
            LAFLF           S+ +P     +    ++F G  D  + W +SK D Y     EVS S  P  +  E  + + + M +YGL+T   +P   TDKT V QYE+++++ L CGGAY+KL G+     PD+L NET YVIMFGPDKCGSTNKVHFI R++NP +G+ EEKH +  P IKTDK +HLYTL++RPDN+FEIL+D  S K+G+LL + +P VNPP+ IDDPSDTKP DWVD+
Sbjct:    4 LAFLFGLIHCEDEVEPSSQIPTVPEGNIFHFQSF-GNSDWSNTWSVSKLDNYT-GVWEVSESAQPQAIPGEKMIYMTKAMSYYGLSTKFDQPLVLTDKTLVLQYELRLQDALNCGGAYIKLFGKENFETPDSLCNETRYVIMFGPDKCGSTNKVHFIFRYKNPKTGEVEEKHMQEAPGIKTDKLTHLYTLIVRPDNSFEILIDAESVKQGNLLTDFVPSVNPPKEIDDPSDTKPADWVDD 241

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: OHS96093.1 (Calreticulin family protein [Tritrichomonas foetus])

HSP 1 Score: 234.6 bits (597), Expect = 7.200e-58
Identity = 120/240 (50.00%), Postives = 158/240 (65.83%), Query Frame = 0

Query:    7 LAFLF-------LASSSTLVPVASAEDALFLETFQGKPDPLSNWHLSKQDKYVEQPVEVSSSKVP-GMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDE 239
            LAFLF           S+ +P     +    ++F G  D  + W +SK D Y     EVS S  P  +  E  + + + M +YGL+T   +P   TDKT V QYE+++++ L CGGAY+KL G+     PD+L NET YVIMFGPDKCGSTNKVHFI R++NP +G+ EEKH +  P IKTDK +HLYTL++RPDN+FEIL+D  S K+G+LL + +P VNPP+ IDDPSDTKP DWVD+
Sbjct:    4 LAFLFGLIHCEDEVEPSSQIPTVPEGNIFHFQSF-GNSDWSNTWSVSKLDNYT-GVWEVSESAQPQAIPGEKMIYMTKAMSYYGLSTKFDQPLVLTDKTLVLQYELRLQDALNCGGAYIKLFGKENFETPDSLCNETRYVIMFGPDKCGSTNKVHFIFRYKNPKTGEVEEKHMQEAPGIKTDKLTHLYTLIVRPDNSFEILIDAESVKQGNLLTDFVPSVNPPKEIDDPSDTKPADWVDD 241

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: CEM22137.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 226.1 bits (575), Expect = 2.600e-55
Identity = 225/386 (58.29%), Postives = 266/386 (68.91%), Query Frame = 0

Query:   25 EDALFLETFQGKPDPLSNWHLSKQDKYVEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAKXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXFRDDHPHNFPAIAGIALEVWTTQPGLRFDSFYLGHDPANAAAHALKTWKVKFDAE 411
            E  LF E F    D  + W  SK DK+  +  + S  +   +  + +L +    +H+G+A  +PE  +  D  FV QYEVK +  LQCGGAY+KL    + + P+   N+TPYVIMFGPD+CG+TNKVHFILRHQNP S +W EKH    P++  D+ +HLY L I+PDNTF+IL+DN  EK GSLL++M PP+NPPEMIDDP+D KP DWVD  KXXXXXXXXXXXXXX  P   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXX YKXXXXXXXXXXXXXXXXXXXXXXXXXXX  D+ PH    I  I +E+WT Q G+ FD+  +  D A A A    TWKV+ D E
Sbjct:   96 EGLLFAELFDA--DWSTRWQKSKADKFTGE-WKHSLREKEAIVGDYALEVGNEARHHGVAVEIPEVTSNKDGHFVVQYEVKFQRELQCGGAYLKLFKLESGTKPEDFTNDTPYVIMFGPDRCGTTNKVHFILRHQNPTSKEWSEKHFSSPPSVPYDQLTHLYALHIKPDNTFDILIDNKVEKSGSLLKDMEPPINPPEMIDDPTDKKPDDWVDNPKXXXXXXXXXXXXXXDAP--KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTAPLVDNPKCKVGCXXXXXXXXXXXXYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDNAPHALSPINAIGIELWTMQSGILFDNIVVSRDMAKAKAFGEATWKVRHDIE 476

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: ORY31544.1 (Calreticulin-domain-containing protein [Rhizoclosmatium globosum])

HSP 1 Score: 225.3 bits (573), Expect = 4.400e-55
Identity = 115/240 (47.92%), Postives = 153/240 (63.75%), Query Frame = 0

Query:   18 LVPVASAEDALFLETFQGKPDPLSNWHLSKQDKYV-----------------EQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAK 241
            +V V +  +ALFL+ F   P+ +  W  S+  K V                 E+P+       PG++ +  L +K    H+ ++   P P   TDKTFV QYEVK++  L+CGGAY+KLL       P+   ++TPY IMFGPD+CGSTNKVHFILRHQNP+S + EEKH   V A K DK +++YTL+IRPD +FEIL++  SEKKGSLLE++ PPVNP ++IDDP D KP DW+DEAK
Sbjct:   44 VVFVPTKRNALFLDQF--VPETVKRWIPSEAKKIVDGVEDEDLIRYRGKWNIEEPI-----VFPGLKADRGLTVKTAAAHHAISAVFPAPVDTTDKTFVAQYEVKLQNGLECGGAYMKLLTYDPKFIPEKFSDKTPYTIMFGPDRCGSTNKVHFILRHQNPISKEIEEKHMNSVVAAKIDKLTNVYTLIIRPDQSFEILINGESEKKGSLLEDLEPPVNPSKLIDDPEDKKPADWIDEAK 276

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: OHT01537.1 (Calnexin like protein [Tritrichomonas foetus])

HSP 1 Score: 223.8 bits (569), Expect = 1.300e-54
Identity = 107/216 (49.54%), Postives = 133/216 (61.57%), Query Frame = 0

Query:   36 KPDPL-------------SNWHLSKQDKYVEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDE 239
            KP+PL               W ++    Y  Q     S        E  + +     +YGL+T  PEP   TDKT V QYE++ E+ ++CGGAY+KL  +     P  + NET YVIMFGPDKCG TNKVHFI RH  P SG+WEEKH E  P +K DK +HLYTL++RPDNTFE+L+D VSEK GSL ++  P VNPP+ IDDP+D KP DWVDE
Sbjct:   17 KPEPLPFHFESFGDDTWTDQWQVTTLPNYTGQWEHRESKAPQSHPGEKMIFMSTENSYYGLSTKFPEPLDVTDKTLVVQYEIRFEDTIECGGAYIKLYSKENFDTPSTVSNETRYVIMFGPDKCGDTNKVHFIFRHLEP-SGEWEEKHLEDPPLVKVDKVNHLYTLIVRPDNTFEVLIDGVSEKSGSLFDSFTPSVNPPKTIDDPTDHKPADWVDE 231

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: POF25991.1 (calnexin like [Quercus suber])

HSP 1 Score: 223.4 bits (568), Expect = 1.700e-54
Identity = 234/361 (64.82%), Postives = 275/361 (76.18%), Query Frame = 0

Query:   52 VEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAKXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXFRDDHPHNFPAIAGIALEVWTTQPGLRFDSFYLGHDPANAAAHALKTWKVKFDAELA 413
            VEQP     S + G+E +  L+LK+   H+ ++    +P     KT V QYEVK++  L+CGGAY+KLL +      +   N +PY+IMFGPDKCGSTNKVHFI RH+NP SG++EEKHAE VPA +  KK+ LYTL++RPD TFEI +DNVS K G+LLE+  P VNP + IDD  D KP DWV+ + XXXXXXXXXXXXXXX P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+YKXXXXXXXXXXXXXXXXXXXXXXXXXXX  D  P NF  + GI  E+WT Q  + FD+ Y+GH  A+A   A +T+K+K+D E A
Sbjct:   92 VEQP-----SVLRGIEGDKGLVLKDKAAHHAISAKFDKPINNKGKTLVLQYEVKLQGGLECGGAYLKLLQDNKALQSEEFSNASPYIIMFGPDKCGSTNKVHFIFRHKNPKSGEYEEKHAELVPAARITKKTALYTLIVRPDQTFEIKIDNVSSKNGTLLEDFAPAVNPEKEIDDADDKKPEDWVENSXXXXXXXXXXXXXXXXAPFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKTPSNFEPMGGIGFELWTMQNDILFDNIYIGHSEADAHVLAEETFKIKYDVETA 447

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: XP_023912867.1 (calnexin homolog [Quercus suber])

HSP 1 Score: 223.4 bits (568), Expect = 1.700e-54
Identity = 234/361 (64.82%), Postives = 275/361 (76.18%), Query Frame = 0

Query:   52 VEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAKXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXFRDDHPHNFPAIAGIALEVWTTQPGLRFDSFYLGHDPANAAAHALKTWKVKFDAELA 413
            VEQP     S + G+E +  L+LK+   H+ ++    +P     KT V QYEVK++  L+CGGAY+KLL +      +   N +PY+IMFGPDKCGSTNKVHFI RH+NP SG++EEKHAE VPA +  KK+ LYTL++RPD TFEI +DNVS K G+LLE+  P VNP + IDD  D KP DWV+ + XXXXXXXXXXXXXXX P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+YKXXXXXXXXXXXXXXXXXXXXXXXXXXX  D  P NF  + GI  E+WT Q  + FD+ Y+GH  A+A   A +T+K+K+D E A
Sbjct:   92 VEQP-----SVLRGIEGDKGLVLKDKAAHHAISAKFDKPINNKGKTLVLQYEVKLQGGLECGGAYLKLLQDNKALQSEEFSNASPYIIMFGPDKCGSTNKVHFIFRHKNPKSGEYEEKHAELVPAARITKKTALYTLIVRPDQTFEIKIDNVSSKNGTLLEDFAPAVNPEKEIDDADDKKPEDWVENSXXXXXXXXXXXXXXXXAPFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKTPSNFEPMGGIGFELWTMQNDILFDNIYIGHSEADAHVLAEETFKIKYDVETA 447

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: XP_018993403.1 (hypothetical protein L202_03999 [Cryptococcus amylolentus CBS 6039] >ODN78357.1 hypothetical protein L202_03999 [Cryptococcus amylolentus CBS 6039] >ODO07046.1 hypothetical protein I350_04414 [Cryptococcus amylolentus CBS 6273])

HSP 1 Score: 223.0 bits (567), Expect = 2.200e-54
Identity = 242/389 (62.21%), Postives = 283/389 (72.75%), Query Frame = 0

Query:   39 PLSNWHLSKQDK----------YVEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLL-----GEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAKXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXFRDDHPHNFPAIAGIALEVWTTQPGLRFDSFYLGHDPANAAAHALKTWKVKFDAELA 413
            P S W +SK  K          YV Q         PG+E +  L+LK    H+ ++T  PEP     K FV QYEVK+++ L+CGGAY+KLL     GEG  +  D  D +TP+ IMFGPDKCGSTNKVHFI RH+NP++G+WEEKH +  P+ K  K ++LYTL+  PD TFEIL+++ S KKGSLLE+  P VNPP+ IDDP D KP  WV+EA XXXXXXXXXXXXXXXXP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+YKXXXXXXXXXXXXXXXXXXXXXXXXXXX  D HP +F  +AG+ +E+WT    + FD+ Y+GHD   A   A +T+ VK   E A
Sbjct:   46 PESRWTVSKATKQTPVGDEIFSYVGQWEIEEPEIFPGIEGDKGLVLKTKAAHHAISTLFPEPIDPKGKPFVVQYEVKLQKGLECGGAYIKLLTEHEEGEGLRAGEDYTD-KTPFTIMFGPDKCGSTNKVHFIFRHKNPLTGEWEEKHLKNPPSPKISKTTNLYTLITNPDQTFEILINDESVKKGSLLEDFDPAVNPPKEIDDPEDFKPETWVEEAXXXXXXXXXXXXXXXXXPLMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLHPSDFTKLAGVGIELWTMTENILFDNLYIGHDVDQAKKFAAETFHVKKPLEKA 433

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: OCF37028.1 (calnexin [Kwoniella heveanensis BCC8398])

HSP 1 Score: 222.6 bits (566), Expect = 2.800e-54
Identity = 251/423 (59.34%), Postives = 294/423 (69.50%), Query Frame = 0

Query:    5 SSLAFLFLASSSTLVPVASAEDALFLETFQGKPDPLSNWHLSKQDK----------YVEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLL-----GEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAKXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXFRDDHPHNFPAIAGIALEVWTTQPGLRFDSFYLGHDPANAAAHALKTWKVKFDAELA 413
            S+L     AS+   V  A++  A F+E F  +  P S W +S+  K          YV Q         PG+  +  L+LK    H+ ++T  PEP     K  V QYEVK+++ L+CGGAY+KLL     GEG  +  D  D +TP+ IMFGPDKCGSTNKVHFI RHQNPV+G+WEEKH +  PA K  K + LYTL++ PD TFEIL+++ S KKGSLLE+  P VNPP+ IDDP D KP  WVD A XXXXXXXXXXXXX   P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y XXXXXXXXXXXXXXXXXXXXXXXXXXXF D HP +F  IAGI +E+WT    + FD+ ++GHD + A   A +T+ VK   E A
Sbjct:   13 SALFLAATASAEQAVFQATSLTAPFIEQF-NEAIPESRWTISRATKQTPVGDETFSYVGQWEVEEPEVYPGIAGDKGLVLKTKAAHHAISTLFPEPIDPKGKPLVVQYEVKLQKGLECGGAYIKLLTEDAKGEGLRAGEDYTD-KTPFTIMFGPDKCGSTNKVHFIFRHQNPVTGEWEEKHLKNPPAPKITKTTALYTLIVNPDQTFEILINDESVKKGSLLEDFTPAVNPPKEIDDPEDFKPETWVDIAXXXXXXXXXXXXXXEAAPLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEDLHPSDFTKIAGIGIELWTMTEDILFDNIFVGHDASQAKKFADETFHVKKPIEKA 433

[Close]

BLAST of NO23G00490 vs. NCBI_GenBank
Match: OCF43499.1 (calnexin [Kwoniella heveanensis CBS 569])

HSP 1 Score: 222.6 bits (566), Expect = 2.800e-54
Identity = 251/423 (59.34%), Postives = 294/423 (69.50%), Query Frame = 0

Query:    5 SSLAFLFLASSSTLVPVASAEDALFLETFQGKPDPLSNWHLSKQDK----------YVEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVFQYEVKMEEPLQCGGAYVKLL-----GEGAVSAPDALDNETPYVIMFGPDKCGSTNKVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILVDNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAKXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXFRDDHPHNFPAIAGIALEVWTTQPGLRFDSFYLGHDPANAAAHALKTWKVKFDAELA 413
            S+L     AS+   V  A++  A F+E F  +  P S W +S+  K          YV Q         PG+  +  L+LK    H+ ++T  PEP     K  V QYEVK+++ L+CGGAY+KLL     GEG  +  D  D +TP+ IMFGPDKCGSTNKVHFI RHQNPV+G+WEEKH +  PA K  K + LYTL++ PD TFEIL+++ S KKGSLLE+  P VNPP+ IDDP D KP  WVD A XXXXXXXXXXXXX   P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y XXXXXXXXXXXXXXXXXXXXXXXXXXXF D HP +F  IAGI +E+WT    + FD+ ++GHD + A   A +T+ VK   E A
Sbjct:   13 SALFLAATASAEQAVFQATSLTAPFIEQF-NEAIPESRWTISRATKQTPVGDETFSYVGQWEVEEPEVYPGIAGDKGLVLKTKAAHHAISTLFPEPIDPKGKPLVVQYEVKLQKGLECGGAYIKLLTEDAKGEGLRAGEDYTD-KTPFTIMFGPDKCGSTNKVHFIFRHQNPVTGEWEEKHLKNPPAPKITKTTALYTLIVNPDQTFEILINDESVKKGSLLEDFTPAVNPPKEIDDPEDFKPETWVDIAXXXXXXXXXXXXXXEAAPLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEDLHPSDFTKIAGIGIELWTMTEDILFDNIFVGHDASQAKKFADETFHVKKPIEKA 433

The following BLAST results are available for this feature:

BLAST of NO23G00490 vs. NCBI_GenBank

BLAST of NO23G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CAB92410.1	7.200e-58	50.00	calreticulin-like protein [Tritrichomonas suis]	[more]
OHS96093.1	7.200e-58	50.00	Calreticulin family protein [Tritrichomonas foetus...	[more]
CEM22137.1	2.600e-55	58.29	unnamed protein product [Vitrella brassicaformis C...	[more]
ORY31544.1	4.400e-55	47.92	Calreticulin-domain-containing protein [Rhizoclosm...	[more]
OHT01537.1	1.300e-54	49.54	Calnexin like protein [Tritrichomonas foetus]	[more]
POF25991.1	1.700e-54	64.82	calnexin like [Quercus suber]	[more]
XP_023912867.1	1.700e-54	64.82	calnexin homolog [Quercus suber]	[more]
XP_018993403.1	2.200e-54	62.21	hypothetical protein L202_03999 [Cryptococcus amyl...	[more]
OCF37028.1	2.800e-54	59.34	calnexin [Kwoniella heveanensis BCC8398]	[more]
OCF43499.1	2.800e-54	59.34	calnexin [Kwoniella heveanensis CBS 569]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniR039	ncniR039	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR047	ngnoR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO23G00490.1	NO23G00490.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|673302	gene_8391	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO23G00490.1	NO23G00490.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO23G00490 ID=NO23G00490|Name=NO23G00490|organism=Nannochloropsis oceanica|type=gene|length=4264bp
ATGCGTCTCGgtaagttcccctcaggaagcggtgcagcacacgccatggg
ctccccctctccctcacttcgtctctctctctttcacccttccgtgatca
tcatcattacctcacgctaacacactccaacccccctcctctctttgcac
cccagCATCTTCCCTCGCATTCCTCTTCCTCGCCTCTTCCTCCACCCTTG
TGCCGGTGGCATCCGCGGAAGACGCTCTGTTCCTGGAGACCTTCCAGGGA
AAGCCAGACCCTCTCTCGAACTGGCACCTGTCCAAGCAAGACAAgtgagt
agacatattgacaacagaggagggagaggagggagatgagaggaggtttt
ggtaacttcagccatagtcatcgtgtattcgaatgcggaggggaggggag
gagagagtgacggaatggtgggtaagaggagttggccactctcagcaact
ggcgcctctatctgcctcttctttcagagagatggaggaaggcgagagat
gagaagttacacactcaccgctcctcacgccccctcctcttcttcctcct
tctcccactccttgccatcctagGTATGTGGAGCAGCCGGTGGAGGTGTC
GAGCAGTAAGGTGCCAGGCATGGAGgtgcgtagcaagagagggagggagg
gaggaagggagaaagggaaggagggagggagggccggggaaatgcaccgc
tggcccacacactcccatacgttttttactcactcagcttacactccctc
ttcctcccccccccttcaaacagCAAGAGTCCTCGTTGCTCCTGAAGGAG
GGCATGAAGCACTACGGCCTCGCCACGTTCCTTCCCGAGCCCCAGGCCTT
CACCGACAAGACTTTCGTCTTCCAATACGAGGTGAAGATGGAGGAGCCCC
TGCAGTGCGGTGGCGCCTACGTCAAGCTGCTGGGCGAGGGGGCGGTGTCT
GCGCCCGATGCCCTGGACAACGAGACTCCCTATGTCATCATGTTCGGGCC
TGACAAATGCGGGAGCACCAATAAGgtactcttccaccctcccctcccct
ccccccttccctccctcccttctctattctcacccgctcgactgccctcc
ctcccctccctcccctcccgccatatcacagGTGCACTTTATTCTCCGTC
ACCAGAACCCGGTCAGCGGGAAGTGGGAGGAGAAGCACGCCGAGGgtacg
tcctccctccccccccccccttttcctcactccctcctccacctctttct
cccgactgatgctccagtgccccaccttctacttgcaaatacctcaatat
ttcttccccgatgtccccctcacccaaaacccgtcctccgaattgctcac
ctcttcctcgccctccctcctccccttcctagGCGTGCCGGCCATCAAAA
CGGACAAGAAGAGTCATCTGTACACTCTCGTCATTCGCCCCGACAACACC
TTCGAGATTCTCGTGGACAATGTCAGCGAGAAGAAGGGCAGgtacgcccc
ccctccccttccctccctctctccctccctcccctccctccctcccttat
ttccttccttccctccctccctccctccctccctccctccctccctgctt
ttctccctcgacctttcgcccataattagcacctcgagcccctcagacga
cgcccacacctccctatttccaaacaagtcaagaaagcctgaccctccct
ccctccctccttccctttctccctccctccagCCTCCTCGAGAACATGCT
GCCCCCCGTGAACCCTCCCGAGATGATCGACGACCCCTCCGACACCAAGC
CCACGGACTGGgtacgccccccctccctccctccctccctccctccctct
caaacctttagttccatatccatcccacacaacctccccccctctctccc
tccccccctccagGTGGACGAGGCAAAGATCCCGGACCCGGATGCTCGCA
AGCCGGACGATTGGGACGAGGACGCCCCTGCCACCATCCCCGACATGGAC
GCCACCAAGgtacctcgccctccctccctccctccctccctccctccatc
cctccctccctccctccctccctccctccctccctccctccctccctccc
tccctccctccctccctctccctctttctctctttctttctccctctttc
ccttccgccttccgccttccccctcctttctctctttttcctgtttcctc
ccgtggttctcagtactcgtcaaagctgtcgtcattccaacactcatctc
tctctctcccccctcaaaactcccaaccctctctccctccctcctcccct
ccctccagCCTGACGGCTGGCTGGACGATGCCCCCGACATGGTTCCCGAT
CCCGAGGCCGTCATGCCGGAGGACTGGGACGAAGACGAGGACGGTGACTG
GGAGGCGCCCACAGTGGTGAATCCCGCGgtatgcacaactccctccctcc
ctccctccctccctcccttcctcctgtgcgttgtttttgtctgcctgccc
ttgactctgctccggtcccaagaaattgggccaggcagggaaggaaggaa
ggagggagggaggatgatgacaaacgagccaaccaaagtgtagccagcga
ctcacccttccctttcctttccttcctccctccctccccccctccagTGC
GTGGAGGGCCCGGGCTGTGGGGAGTGGGTTCGACCTACCAAGCCCAACCC
CGAGTACAAGGgtaagtgcccccccctccctccctccctccctccctccc
tccctccctctctccctccctccctccctccgttccccccttcttccttt
cctcctttctttccctcctcggcactcctcgtcccttacatccctcgttg
tcgagcctctcatttcggtgaccatatagcataccgccctgtccctatct
ttttcccaatcaacattaaacaaactccgaacccttccctccctccctcc
ctccctccctccctccagtcacatgattgtctcaccagtgagtgacccat
tcccctccctccctccctccccccccctccctccctccctccctccctcc
ctccctcagGCAAGTGGTTCGCCCCCATGATCGACAACCCGGAGTACAAG
GGCGTGTGGACCCCTCTCCAGATTCCCAACCCGTCCTTCTTCCGCGACGA
CCACCCCCACAATTTCCCCGCCATCGgtacggcctccctaaacctcacct
ctccctccctccctccctcccttaccctccatcgcccctccttcgtcaag
cccatttatctgtgacgatccctccctccctccctccctccctccctccc
tccccgcagCCGGCATCGCCCTTGAGGTGTGGACGACGCAGCCGGGCCTG
CGATTCGACTCCTTCTACCTCGGCCACGACCCGGCCAACGCCGCCGCCCA
TGCCCTGAAAACCTGGAAAGgtaaagcccctccctccctccctccctccc
tccctccctccctttccgtcttctcacatcctggcccccctctccttcct
tccccatccctccctcccttcctcagTCAAATTCGACGCAGAGCTCGCGG
AAGAGGAGGCTGCCATCGCCGCCAACAAAAAGGAGGCTGCCCAGGGATAC
AAGGAGAAGGCCATGgtacgtgcatttccctccctccctccctccctccc
tccctccctctctccctccctcctctccggtgctatcgatcgatctcgcc
ttcatcgagcccgcaatgccgacttacatctgcttctgcttctaaacacc
ctctttcccttcttccctccccatcatgcccacctgcccaagcccatgac
gctgactgtccctcacgccttgtcccccctagactttccaacaccctctt
ccctccccatcacgccccgcaaaccgcaagcccgtcatgtttacaccttc
ataaatgaaaattaaaccgcccactcacccctccctcccacccgccctcc
ctccctccctccctcactagTTCTACCTGGAGGAGGCTGTGCGCCGGGTG
AAGAAGCAGCCGGTGGCAGCCGCCGCGACCGGAGCCACCCTCCTCCTCTC
CCTCCTCTACCTTGCCATGTTCACGGGCAAGGAGGAAGAGGAAGAGAAGC
CGAAGGAGGGAGGGAAGGAGAAGGAAGGGAGCGAGAAGGAGATTCAGGAG
GAGGAGGAGGAGGATGCAGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGA
GGAGGAGGAGGAGGTAAAGGGGAAGAAGACCACTCGTGCGTCCTCCAGGA
AGAAGGCGGAATAA

protein sequence of NO23G00490.1

>NO23G00490.1-protein ID=NO23G00490.1-protein|Name=NO23G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MRLASSLAFLFLASSSTLVPVASAEDALFLETFQGKPDPLSNWHLSKQDK
YVEQPVEVSSSKVPGMEQESSLLLKEGMKHYGLATFLPEPQAFTDKTFVF
QYEVKMEEPLQCGGAYVKLLGEGAVSAPDALDNETPYVIMFGPDKCGSTN
KVHFILRHQNPVSGKWEEKHAEGVPAIKTDKKSHLYTLVIRPDNTFEILV
DNVSEKKGSLLENMLPPVNPPEMIDDPSDTKPTDWVDEAKIPDPDARKPD
DWDEDAPATIPDMDATKPDGWLDDAPDMVPDPEAVMPEDWDEDEDGDWEA
PTVVNPACVEGPGCGEWVRPTKPNPEYKGKWFAPMIDNPEYKGVWTPLQI
PNPSFFRDDHPHNFPAIAGIALEVWTTQPGLRFDSFYLGHDPANAAAHAL
KTWKVKFDAELAEEEAAIAANKKEAAQGYKEKAMFYLEEAVRRVKKQPVA
AAATGATLLLSLLYLAMFTGKEEEEEKPKEGGKEKEGSEKEIQEEEEEDA
EEEEEEEEEEEEEEEVKGKKTTRASSRKKAE*

Synonyms

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