NO23G00450, NO23G00450 (gene) Nannochloropsis oceanica

Overview
NameNO23G00450
Unique NameNO23G00450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1504
Alignment locationchr23:197592..199095 -

Link to JBrowse

Properties
Property NameValue
DescriptionCycloeucalenol cycloisomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:197592..199095 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0047793cycloeucalenol cycloisomerase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR020532Cycloeucalenol_cycloisomerase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO23G00450 vs. NCBI_GenBank
Match: EWM22977.1 (Cycloeucalenol cycloisomerase [Nannochloropsis gaditana])

HSP 1 Score: 408.7 bits (1049), Expect = 1.800e-110
Identity = 210/290 (72.41%), Postives = 237/290 (81.72%), Query Frame = 0
Query:   68 LIFQFLTPVKGGVGRWLPPPETDKGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPP--------SDALAGSS---SFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDEWEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIKG 347
            ++F FLTP KGG GRWLPP +TDKGAYERFVL Y+PVW+GVFAVIIAGQLYE+FTA+TYMLVC  LC+PLF Y  LAP+LP H PP        + +L  SS   S  + YP KA+ WLAIYSHIGNYWYTHYFY VL ASYSMPS RLNDVPLPLYFATFFYFSTYH LSN+LLRRV +GY     R IFL+ L++ LSY TAF ETLTIS+FPYYSF+DPFMA TVGSAFYG+YFLVSFPAFFRLDE++  RLSLYQ+ MD+LGAGMLILILLDAVRL L +PLT+ G
Sbjct:   65 VVFVFLTPAKGG-GRWLPPADTDKGAYERFVLAYSPVWMGVFAVIIAGQLYETFTAHTYMLVCTTLCLPLFFYPFLAPALPSHAPPPKEASEGDNTSLPSSSTVPSLLQGYPLKATAWLAIYSHIGNYWYTHYFYTVLGASYSMPSLRLNDVPLPLYFATFFYFSTYHALSNLLLRRVTSGYQRTPARGIFLLLLLLALSYCTAFMETLTISAFPYYSFQDPFMAFTVGSAFYGLYFLVSFPAFFRLDEFKEGRLSLYQSAMDALGAGMLILILLDAVRLWLGMPLTMAG 353          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: XP_009035135.1 (hypothetical protein AURANDRAFT_23404 [Aureococcus anophagefferens] >EGB10328.1 hypothetical protein AURANDRAFT_23404 [Aureococcus anophagefferens])

HSP 1 Score: 260.4 bits (664), Expect = 8.000e-66
Identity = 145/284 (51.06%), Postives = 177/284 (62.32%), Query Frame = 0
Query:   68 LIFQFLTPVKGGVGRWL-PPPETDKGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDEW-----EGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIK 346
            ++ Q   P   G G WL P     K A E + L Y  VWIG FA I+  + YE F A  Y LVC GL +PL+    L P+L                 ERY FKA+VWLAI+  +GNYWYTHYFY+VL A+Y+MP++RLNDVP+ ++FAT FYF  YH+LSN  LR++ T Y P+  R  F    +V +SY TAF ETLTIS FPYYSFED  MA TVGSAFYGIYFLVSFP F RLDE       GA   L+ T +++L + M +L LLD VRL L IP  +K
Sbjct:   13 VVLQRCVPRPTGRGTWLAPKTNAPKRATELWFLAYAVVWIGAFACIVGFEWYERFDALAYFLVCGGLALPLYAQPFLLPAL--------TYDERRPLAERYSFKANVWLAIFGFVGNYWYTHYFYSVLGAAYTMPAWRLNDVPVAMFFATHFYFCFYHVLSNAALRKIRTSYEPSKRRLAFEAASIVAMSYLTAFMETLTISGFPYYSFEDRDMAYTVGSAFYGIYFLVSFPMFLRLDETPPTVVNGATHDLFATAVEALASSMAVLCLLDFVRLALGIPFAMK 288          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: KOO24809.1 (hypothetical protein Ctob_006556 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 253.4 bits (646), Expect = 9.800e-64
Identity = 141/269 (52.42%), Postives = 181/269 (67.29%), Query Frame = 0
Query:   83 WLPPPETDKGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDEWEGARLS----LYQTGMDSLGAGMLILILLDAVRLC-LAIPLTIKG 347
            WL PP  +K AYE +VL Y+ VW+G FAVIIAGQLYE F A  Y +VC GL  PL L        P   PP  A          +  +A +W+AI+  IGNYWYTHYFY VL+A Y+MP++RLNDVP+ +Y  T FYF++YH+L+N+ +RRV + +AP   R+   + LV+ +SY TAF ETLTIS+FPYY FE+  MA TVGSAFYG+YF+VSFP +F LDE + A  S    L +  + SLGAGM +L+LLDA RL  + +PLTI G
Sbjct:   67 WL-PPSGEKRAYEVWVLKYSVVWMGAFAVIIAGQLYEQFDALGYFVVCGGLAAPLLLQ-------PLFFPPRAA---------GHALRAQLWIAIFGFIGNYWYTHYFYCVLRAKYTMPAWRLNDVPIAMYAGTHFYFTSYHVLANLPIRRVRSTFAPGTARTCLELGLVLAMSYATAFMETLTISNFPYYDFENRSMAYTVGSAFYGLYFVVSFPIYFALDEPDAALPSPGAALVEVALSSLGAGMAVLLLLDAARLAVVGVPLTITG 318          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: OEU13221.1 (hypothetical protein FRACYDRAFT_189108 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 249.2 bits (635), Expect = 1.900e-62
Identity = 142/282 (50.35%), Postives = 176/282 (62.41%), Query Frame = 0
Query:   83 WLPPP--ETDKGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSS----FFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDE--------------WEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTI 345
            WLP P  E  K AYE +VL YTP+WI  F  I+A  LYE F   +YM VC GL +P  L  +L PS       S   + +        ERY FKA++WLA+YS IGNYWYTHYFY+VL A Y+MP+ RLN+VP+ LYFAT        + SN+LLR+V T Y PN+ R I  + +V   +YFTAF ETLTIS++P YSFED  MA TVGSAFYGIYF+VSFPAFF  D+                  ++S + T + S G GM+I+ILLD VRL L IPL +
Sbjct:   36 WLPNPITEPSKRAYEIYVLCYTPIWIIAFCCIVAFGLYEDFDEWSYMKVCVGLSLPYLLQPILYPSAGTSSSTSTINSSNPDVQRPILERYSFKANLWLAVYSFIGNYWYTHYFYSVLHAKYTMPAHRLNNVPIALYFATHXXXXXXXVFSNMLLRKVTTTYQPNLTRKILYIAVVATFAYFTAFMETLTISAYPDYSFEDRDMAYTVGSAFYGIYFIVSFPAFFVFDQDIDXXXXXXXXXXXXXXXKISAWDTIISSCGYGMIIMILLDIVRLYLDIPLVV 317          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: CBJ29974.1 (Cycloeucalenol cycloisomerase [Ectocarpus siliculosus])

HSP 1 Score: 244.6 bits (623), Expect = 4.600e-61
Identity = 144/291 (49.48%), Postives = 180/291 (61.86%), Query Frame = 0
Query:   73 LTP--VKGGVGRWLPPPETD--KGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDEWE-------------GARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIKG 347
            LTP   K G   WL   +T+  K A+E F L Y   W+G FA II   LYE F   +YM+VC GL +P+  + +++      + PS+A     +  +RY  +A+VW+AIYS IGNYWYTHYFY VL A Y+ PS+RLNDVP+PL  AT FYFS YH LSN+ +R+V T +     R++ LV LV V+SY  AFTETLTIS FPYY FED  MA  VGSAFYGIYF+VSFP F+  DEW               +   L+   +DSLGA MLIL LLD VRL +     +KG
Sbjct:   82 LTPKDSKRGGSTWLACAKTNPAKRAWEVFNLRYAVFWVGCFAAIIGFSLYEDFDEVSYMVVCFGLSLPIVAFPLVS------MHPSEA---GLAVGQRYGVRANVWIAIYSFIGNYWYTHYFYCVLGAKYTFPSWRLNDVPIPLIAATVFYFSLYHALSNMAIRKVVTSFEATTSRAVTLVVLVGVMSYAVAFTETLTISGFPYYEFEDRDMAYVVGSAFYGIYFVVSFPMFYAFDEWPQEDENKLADRKAGNSARGLWGAAVDSLGASMLILCLLDFVRLAVGSEFFMKG 363          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: XP_005767265.1 (hypothetical protein EMIHUDRAFT_432676 [Emiliania huxleyi CCMP1516] >XP_005772660.1 hypothetical protein EMIHUDRAFT_444727 [Emiliania huxleyi CCMP1516] >EOD14836.1 hypothetical protein EMIHUDRAFT_432676 [Emiliania huxleyi CCMP1516] >EOD20231.1 hypothetical protein EMIHUDRAFT_444727 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 231.9 bits (590), Expect = 3.100e-57
Identity = 131/245 (53.47%), Postives = 159/245 (64.90%), Query Frame = 0
Query:  106 IGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDEWEGARL---SLYQTGMDSLGAGMLILILLDAVRLCLA-IPLTIKG 347
            +G F VIIA +LYE FTA TY LVC GL  PL L  +               A      ER+  +A +W+AI+  IGNYWYTHYFY VL+A Y++P++RLNDVP+ +Y AT FYFS+YH+ +N+ LRRV TG+AP   R+     +V  LSY TAF ETLTIS FPYY FED  MA T+GSAFYGIYFLVSFP ++ LDE     L    L    + SLGAGML+L+LLD  RL  A  PLTI G
Sbjct:    1 MGAFGVIIALELYEEFTAATYFLVCGGLAAPLVLRELARGG-----------ADGRPLGERHGARAQLWIAIFGFIGNYWYTHYFYCVLRARYTVPAWRLNDVPICMYLATHFYFSSYHVFANLALRRVATGFAPGNLRTALFAYVVCALSYATAFMETLTISHFPYYDFEDRHMAYTLGSAFYGIYFLVSFPVYYALDEPGNTPLEGTGLRGVALSSLGAGMLVLLLLDLTRLAAAGAPLTIGG 234          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: XP_002291862.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90713.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 231.9 bits (590), Expect = 3.100e-57
Identity = 139/282 (49.29%), Postives = 173/282 (61.35%), Query Frame = 0
Query:   84 LPPP--ETDKGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSL-------PPHVPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHI-LSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLD---------EWEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIKG 347
            LP P  E  K  YE F   Y+ VWIG+F  I+  Q YE FTA +Y+ VC GL +PL L  ++ P          P + P        SF +RY  KA+++L IYS IGNYWYTHYFY+VLKA Y+MPS RLND+P+ ++ AT FYF TYH+ +SN +LR V   Y     +S+     V+ LSYFTAF ETL+ISSFPYYSFED  MA   GSAFYGIYF+VSFP F+  D         + +   ++L  T   + G GM+IL LLD VRL L IPL I G
Sbjct:   45 LPDPLTEPSKYCYEIFCWYYSIVWIGIFGFIVVSQCYEYFTAWSYLGVCGGLALPLMLQPMVYPQAWKATVDGKPIINPD----AHQSFTQRYSTKATLYLFIYSFIGNYWYTHYFYSVLKAKYTMPSHRLNDIPIAMFLATHFYFCTYHVCVSNSILRFVDRSYKNGWRKSVLFWYTVLFLSYFTAFVETLSISSFPYYSFEDRTMAYVWGSAFYGIYFIVSFPGFYYFDADVDYVGSTKQQHKHITLMDTFTTACGHGMMILTLLDFVRLYLGIPLKIGG 322          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: XP_005836865.1 (hypothetical protein GUITHDRAFT_85507 [Guillardia theta CCMP2712] >EKX49885.1 hypothetical protein GUITHDRAFT_85507 [Guillardia theta CCMP2712])

HSP 1 Score: 228.8 bits (582), Expect = 2.600e-56
Identity = 126/268 (47.01%), Postives = 169/268 (63.06%), Query Frame = 0
Query:   79 GVGRWLPPPET-DKGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDEWEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIK 346
            G G WL P  +  K A E + L Y   WI  F +IIA +LY+ F    Y LVC GL +PL L  VL P +                 ER+ FKA+VW+ I+  IGNYWYTHYFY VLKASY+M S+ +N VP+P++FAT FYF+ YH LSN+ +R+  + Y  +  R+I+L+ L+  +SY TAF E LTIS F  YSF D  MA  +GSAFYGIYF+VSFP ++R+DE +    S +Q  ++SL +GM++L LLD VR+ L + L  +
Sbjct:   42 GSGYWLAPKTSKSKRACELWFLVYGCFWISCFGIIIALRLYDDFDRKDYFLVCGGLMLPLLLQPVLFPKI--------TADDGRPLLERHSFKANVWIFIFGFIGNYWYTHYFYNVLKASYTMKSWDVNGVPIPMFFATHFYFTFYHALSNMAIRKAVSTYENSFARTIYLMLLIFTMSYITAFMEALTISGFSCYSFADRHMAWILGSAFYGIYFIVSFPMYYRVDELKVPH-SAFQAAIESLASGMMVLCLLDFVRVYLNLDLEFR 300          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: EJK52525.1 (hypothetical protein THAOC_28184 [Thalassiosira oceanica])

HSP 1 Score: 226.5 bits (576), Expect = 1.300e-55
Identity = 135/278 (48.56%), Postives = 171/278 (61.51%), Query Frame = 0
Query:   84 LPPPETD--KGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSS---FFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHI-LSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLD---------EWEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIKG 347
            LP P T+  +  YE F   Y+  WI +F  I+  Q YESFTA +Y+ VC GL +PL +  +L P   P       +    +   F +RY  KA ++L  YS IGNYWYTHYFY+VL ASYSMP+ RLNDVP+ ++ AT FYF+TYH  +SN +LR V   YA    + +     V+ LSYFTAF ETLTISSFPYYSF+D  +A   GSAFYGIYF+VSFP F+  D         +    R++L  T   + G GM+IL +LD VRL L IPLTI G
Sbjct:   56 LPDPTTEPTRYCYELFSWHYSVFWIAIFGYIVMSQCYESFTAFSYLYVCGGLALPLVVQPLLYPQACPVSMNGYVIVNPDTRRPFVKRYSTKAVLYLMTYSFIGNYWYTHYFYSVLNASYSMPAHRLNDVPIAMFLATHFYFTTYHASISNGILRFVEMRYANGWRKQVLFWYTVLFLSYFTAFMETLTISSFPYYSFDDRTVAYIWGSAFYGIYFIVSFPGFYHFDSCVDVVEENQSTRPRVTLIDTFTTACGHGMMILTMLDFVRLHLGIPLTIGG 333          
BLAST of NO23G00450 vs. NCBI_GenBank
Match: XP_003079009.2 (Cycloeucalenol cycloisomerase [Ostreococcus tauri] >CEF97728.1 Cycloeucalenol cycloisomerase [Ostreococcus tauri])

HSP 1 Score: 221.9 bits (564), Expect = 3.200e-54
Identity = 128/284 (45.07%), Postives = 168/284 (59.15%), Query Frame = 0
Query:   73 LTPVKGG---------VGRWLPPPETD--KGAYERFVLTYTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPHVPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSMPSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVCLVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAFFRLDEWEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIK 346
            LTPV+GG           RW+     +  K + E FV+ Y+  WI    V+IA + YESF    Y+  C     P   + ++ PS       +DA        ERY  KA+VW+A++S IGNYWYTHYFY VLKA Y+  + RLNDVP+ +Y  T  YF  YH+LSN  LRR+ TGY  N  R +F    +  +SY TAF E+LTI  FPYYSF D  MA T+GSAFYGIYFLVSFP F R+DE +   + + Q   +++G+GM +L LLD VR+ L IP  ++
Sbjct:   19 LTPVRGGKMTSETEARSARWIVDARVNPSKASAETFVMRYSMCWIASVGVVIATKAYESFDRWGYLAYCGACAAPAIAWPLMFPS------RADA---GKPLGERYIVKANVWIAVFSFIGNYWYTHYFYGVLKAEYTFDAHRLNDVPISMYLMTHAYFMFYHVLSNAALRRIRTGYVDNAQRFVFECAAIGAMSYTTAFMESLTICGFPYYSFADRHMAYTLGSAFYGIYFLVSFPMFLRVDETK--LMPMSQVFWEAMGSGMAVLCLLDFVRVYLRIPFQMR 291          
The following BLAST results are available for this feature:
BLAST of NO23G00450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22977.11.800e-11072.41Cycloeucalenol cycloisomerase [Nannochloropsis gad... [more]
XP_009035135.18.000e-6651.06hypothetical protein AURANDRAFT_23404 [Aureococcus... [more]
KOO24809.19.800e-6452.42hypothetical protein Ctob_006556 [Chrysochromulina... [more]
OEU13221.11.900e-6250.35hypothetical protein FRACYDRAFT_189108 [Fragilario... [more]
CBJ29974.14.600e-6149.48Cycloeucalenol cycloisomerase [Ectocarpus siliculo... [more]
XP_005767265.13.100e-5753.47hypothetical protein EMIHUDRAFT_432676 [Emiliania ... [more]
XP_002291862.13.100e-5749.29predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_005836865.12.600e-5647.01hypothetical protein GUITHDRAFT_85507 [Guillardia ... [more]
EJK52525.11.300e-5548.56hypothetical protein THAOC_28184 [Thalassiosira oc... [more]
XP_003079009.23.200e-5445.07Cycloeucalenol cycloisomerase [Ostreococcus tauri]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00450.1NO23G00450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601847gene_8386Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00450.1NO23G00450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00450 ID=NO23G00450|Name=NO23G00450|organism=Nannochloropsis oceanica|type=gene|length=1504bp
GTGGGTTTATGCCTATGTTCGTGACCTTTATGAGGTCGTAAAGTTGAAGA
CTGGCAGCAGCAACAGCCCAAAAGCGGGTGCCGACAACGCCTCGCCAACA
TCGAGTGCAATGATATATTCAATAATCATTCCACGTGTCTGATACCTTAC
AAACCCTTCGCGCACACACCGTGACACTCTCACAGCTGCCTAGCCCACCC
GTCCGAAGATCATGGCTGTGTCATCCTGGTCGTCCTCGATAACCTCCTCC
CTTGCCTCCTTTCTTCCTTCTTCGGCCACCGATGCGGCAACTGCCACGCT
GGCCTGGTTCACGGGCACACCCCCTACACCTCCACCACCACCTATAGATA
CAAGTGCGAGGGTCGAGCTGGTCATGAGTTTGATTCTCCTGGCGCAATTG
GCCCTTTTGCTATTGATCTTTCAATTTTTGACGCCGGTCAAGGGAGGCGT
CGGGCGGTGGCTGCCTCCACCTGAGACGGACAAAGgtacatgtatatttg
tgcgtgcttgaagcaggaaaaaaaggaagagcgaaacaagcttctcgtaa
tgaaagtagagctttgatgcacgcattctgcgaatcccacctacccagct
cccttatcctcccttccctcccttccctccctcatcccccctcatccctc
tcctttcgctcataacagGCGCTTACGAACGCTTTGTCTTGACCTACACC
CCCGTATGGATTGGTGTCTTTGCTGTCATTATCGCTGGACAACTCTACGA
GTCTTTCACCGCTAACACTTATATGCTTGTTTGTGCCGGATTATGCGTCC
CCCTTTTTCTCTATGCTGTCCTCGCCCCCTCCCTGCCTCCTCATGTCCCT
CCAAGCGATGCACTAGCCGGATCATCCTCCTTCTTCGAGCGGTACCCATT
CAAGGCGTCGGTTTGGTTAGCGATTTACTCGCATATCGGCAATTATTGGT
ACACACATTACTTTTACGCGGTCCTTAAAGCCTCCTACAGCATGCCGTCC
TTCCGCCTGAACGATGTGCCCTTGCCTCTATACTTCGCGACGTTTTTCTA
TTTCTCGACCTACCACATCCTGTCGAATGTATTGCTACGACGAGTGTGTA
CTGGGTATGCACCTAACATTTTCCGCTCCATCTTTCTGGTGTGCTTGGTG
GTGGTTTTGAGCTACTTCACTGCGTTCACTGAGACATTAACAATCAGCTC
GTTCCCCTACTATTCGTTTGAAGATCCGTTCATGGCCATGACCGTGGGAA
GTGCATTTTATGGAATTTATTTTCTGGTAAGCTTTCCGGCGTTCTTCCGA
CTGGATGAGTGGGAGGGGGCGAGGTTGAGTCTGTATCAGACAGGAATGGA
TTCTCTGGGTGCAGGGATGTTGATTCTCATATTGTTGGATGCCGTCAGGC
TGTGCTTGGCGATTCCTCTGACGATCAAAGGGTAGGGGTATCACTGCTGT
TCACGATAATACGAGGATGTTTACATGCATGTAAAAGGAATTAAAAATAC
TCTA
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protein sequence of NO23G00450.1

>NO23G00450.1-protein ID=NO23G00450.1-protein|Name=NO23G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp
MAVSSWSSSITSSLASFLPSSATDAATATLAWFTGTPPTPPPPPIDTSAR
VELVMSLILLAQLALLLLIFQFLTPVKGGVGRWLPPPETDKGAYERFVLT
YTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPH
VPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSM
PSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVC
LVVVLSYFTAFTETLTISSFPYYSFEDPFMAMTVGSAFYGIYFLVSFPAF
FRLDEWEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIKG*
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