NO23G00390, NO23G00390 (gene) Nannochloropsis oceanica

Overview
NameNO23G00390
Unique NameNO23G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3997
Alignment locationchr23:175604..179600 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:175604..179600 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00390.1NO23G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00390.1NO23G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00390 ID=NO23G00390|Name=NO23G00390|organism=Nannochloropsis oceanica|type=gene|length=3997bp
ATGGAGTGCTTCGTGCCCGTGCTGCAGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGATGGACCTGAACCCATACTTGCCCTCGCTGCGGCAGC
GGGAGCACCAGCAGCAGAAGGAGCAGGAGGTGATCGACGACATCCTCTCC
TTCCTCCTCGCTCTCATCACACACACACCCTCCTCCCCCCCTTCCTCCTC
CTCCTCCTCCTCCTCGTCGGCCCCTCTGACCCTTGCTACCAAATGCCCTC
TCCTCCCCTCCCTTCTCCGCCTCCTCCACACCTCTCCCCCTCCCTCCTCC
CACACCACCGCTCTCGCCCTTCGCCTCCTTTCTCACCTTCTCCCTTTCCA
CATAGGAGGGAGGGAAGGAGAGAATGAGGGGCCCTTCCTCCTCTCTTTTT
CCTCGGGAGGGAGGGAGGGAGGGAAGGAGGACATCGCCTTCCTTCCCTTC
CTCTTGCGGTTGGCCACCCAAGAGCACGACCCTGACAGCTTCCAGGGCTC
GGGTAAAACGAAAGCTGCCCTATGTTGTGCACGGGCCTACCTCTCCCTCC
CGCCCTCCTACCCTCCCTCCCTGAGGACAGGGAAAGGAGGGAGGGCGGGA
GGGAGGGCGGGATCGTTGGTGCGATTTTTGCATGATAAACAAGCAGCTGT
ACGGGCCTTGGCCTTTGGCTGTCTAGTGGCGCTTGTGAGGGGGGGGAGgt
gggggaggaggatggggagggagggaaggaaggagggctggtgaagctgg
cattggatgttgtgggggacagGAGGGAGGCACCTGCCGTAGCAGCAGAG
GCCCTCAGCATCGTGACTGCCCACCTGGCCCTCCCTCCCTCCCCCCCTCC
CTCTCTTTCTCCCTCCTTCCTTTTCACGGGGGTGACGTTGATGACCCTCT
TGCAAACGGCAAGCGAGGCGTTAGCTCTTACCGTTCTCCCTCCTTCCTTT
CCTTCCCTCCCTCCCTCTATCGACCCCCACACGGGGAGGAGGGGAGGAGC
GAGGGGTAGGCAGGGAGGGGGAGGAGGAGGGATGGTGCGTCTTTTTGCTG
CTCTCGAGAGCGTACAAGCCGCCCTCCTGTCCTCATCCTCCTTCCAGGGG
GAGGGCGAGGGAGGGAGGGAGGGAGGGATGGAGGGAGGGCTCGTCAAGCG
GTTGGTGTGGGAGCAGGGCTTGCCCCATGATGTGGGTAAATTCCTTCTTT
GTTCTAGAACATTAAAGGCCAACCATCAACAAGCAGCACGGGTTTCACTG
GGTCTGCCCTCCCTTCCCCCTTCCCTCCTGTCCTACTCTGCCTCCTCTAC
TTATTTTACTGGTGAGGGGGAGGAACGGAGGAGGAGGAGGAGGAAGGACG
GGAGGAGGGGGGGAGGAGGAGAGTGGGAGGAGAGAGTGGTGGAAGCAGCA
TGGAGGGAGGGAGGGGGAGAGGCGGTGGCATCAGCTGCACAGTCTCAAGG
CATGAAGCTTCTCCGCCTCTTCCTCGCCCTCCCGTCCTCCCTCCCTCCCT
CATCTCAAACGCAGGAGGAGGAGGAGGGTGGGGAGGAGGGAGGGAAGGAG
GGAAGACGGCTGGTCATGGAGACGGAGATTGTCAAAGGAGTGAGTGAGTG
CCTAAGCGCCTGGACCAGGGATTTTGAGGATGAGGGGGAGGAAGGGAGGG
AGGAAGGGGCTGAAGGGGAGGACGAGGACGATTGGGTGCTGGTTCCTTCT
TCAGAATCTCCTTCGTCCTCGTCCTCGTCCTCCCCCCAGCCCGCCCTCCC
TCCCTACTCCTCGGCGGCACGTCGCGTTCTGATCGAGGCCTGCAGGACAG
CTTTCGTCATGTACAGTATCGTCCTCGAGGAAGGGGGGGAGGAAATGGAG
CAGGGAAGGAAGGAAGGAAAATTGGCAAGAGGAGAGAGGGAGGGAGGGAT
GGAGGGATGGGTAGTGCCGTCTTCTCTGTTGATGCGAGATGTGCGATCGC
TTACGTTGGTTTTGATGAGGGAGGTGAGGGAGGGGGGGAGGGAGGGAGGG
AGGGAGGGTGGGCGACGGCTGTTTTTGGAAGCACTTAAGCTTCTCAGTCT
TCTTCTGACCACTACTCAGTACCGAGAGTCGAGAAAGAGGGAGGAGGAGG
AGGAGGAAAGGAAAGGAGGGAGGGAAGGAGGGAAGGAGGACATGCTGTGG
CGCTTGGTGGCTGGGCGATTTAAGGTCGCCTTTGGACAAGGGGGGGGGAA
GAGGAGGAGGAGGAAGGGAGGCAGGGAGGGGAGAAGGAGCGTGTCCTCCT
GTCCTCCTGCCTGGCCTCGCTGTTGGAGTCgtcagagacatgtaggcgaa
acgccctccatcccgcctccgcccttcctccctttctccttcggaccatc
cgcgacctgcgccgagggctgctgctggcgatgggaggactcacccctcc
ctccctcccttcctcctcgccagTGAAGGAGGGAGGGAGGAAGAGTAAGC
AGCAGCAGCAAAAACAGCACCCGTTGAAGCAACTTAACGCTCGCTTGGCC
TCTGGTGGTGGTAGTTGGCCTCCTTCTCGACGAGGAAGAGAAGAAAGAGG
AGGAGGAAGGGAGGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAG
GAAGTGGCGCCAAGTACACTTTGGAAGCCATCGACCTTACCCTCCTCCTT
GCCGTCCTCCGCTCCCTCCTAATCCCTCCCTCCCTCCTCCCTTCCCCCCC
TCCCTCCGTCTCTGCACAAGACCAAGCCCTGGAAGGAGGACTCATCATCC
TTGCCTGCGAGCTCTACCCCCTCGCCCTCACCCTCCACCTGGACGACCCT
CACGGCCTCCCTCCCTCCTTCCCTCCCTCCCTGCCCCCCTCCCTCCTCGC
CGCCCTCCTCTCCATGCTCTGCAATTTGGTAGCTTTCCATGACGTGGCCA
AGCAGGCCCTCCTTCACTTTTCCTCCTCCTCCTCCGCCTCTTCCTCCTTT
CTTCCCTCCCTCCTTCGCCTCGCCCTCCGCCCTTCCCTCCCCCCCTCCAT
CGCTCATCCCCTCCTCTCCCTCCTTCGTTCCCTCTCCCTCCTCCCCGCCG
GACGCCACCACCTTTTCCTCCCTTCCTCTTCCCCCCCGTCTTCCTCTTTC
CTGGCCTCCTCCCTCCTCTCCCTCGTTCCCTCCCTCCTCCTCACCCCTTC
TCCGGCCCATCGTCGTCGCCGACCGGCAGAGGTCGGGAAGGAGGGATGGG
TGCGCCTACTGGGTCTCTTTAAACTGCTCGTCAATCTCACCCTGGCCGCA
GAAGGGCAACAGCTCCTCCACCGGCACCTCCCTCCCACCCTCCTACCCTC
CGTTCTGGAAGACGTCGTTTTATTCATCAAAGAAGGCGAGAAGGACAAAG
GGAAGGAGGGAGGATGGGACGATGGGAAGGAAGAAGAGGTTGAAGAGCTC
ACGGCACAACTCTGCTACCTTCTGCGAAACCTCTCCTTCTTACGAGGAGG
GGGGGGCAAGGGGGGAGGAAAGGCTAGCGTTTTGGCCTCTGGGACGTTGT
TGAGATTTCTGGTGTGTGACGCGATGACGCATTCAAAAATTCAAATTCGC
TTCCCGGCAACGGTCGCCCTGTGGTCTCTGTTACACCATTCGGAGAAGTC
GACCGCGTTGCTCTTGCGCGGGGATTTTTTGGCTTCATCCACCTCTTCCT
CCCTTTCTTCCTCGCCCTCGTCCTCGGTGCCTTCTTGTGTGGGTGTATGG
CAACAGATAGCACTTGCAAAGAAGCTGGCGGGCAGGGATGCCCTCGAAGG
GGAGGAAGGGAGGGAGGGCGAGGGGGAGGAAAGGTTGATGATGGAAGGGG
TGCAGAGGGCCTTGGAGAATATTGAAGCATTGCTTTCATCTTTCTCCACG
GTTGCGTCCTCCTCGCTGTCCTCGTCACCGTCCTCGTTATTGAAGGTGGG
TGAAGGCAAAGGGAAGGTGCAAGGAGGGAGGAGTGGTGGTGGTGGTGATG
GAGCCGCAGCAGCAGCAACAGTAGCTGTCATAGACGAATCGAACTAA
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protein sequence of NO23G00390.1

>NO23G00390.1-protein ID=NO23G00390.1-protein|Name=NO23G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1260bp
MECFVPVLQREGGREGGREGGMDLNPYLPSLRQREHQQQKEQEVIDDILS
FLLALITHTPSSPPSSSSSSSSSAPLTLATKCPLLPSLLRLLHTSPPPSS
HTTALALRLLSHLLPFHIGGREGENEGPFLLSFSSGGREGGKEDIAFLPF
LLRLATQEHDPDSFQGSGKTKAALCCARAYLSLPPSYPPSLRTGKGGRAG
GRAGSLVRFLHDKQAAVRALAFGCLVALVRGGRREAPAVAAEALSIVTAH
LALPPSPPPSLSPSFLFTGVTLMTLLQTASEALALTVLPPSFPSLPPSID
PHTGRRGGARGRQGGGGGGMVRLFAALESVQAALLSSSSFQGEGEGGREG
GMEGGLVKRLVWEQGLPHDVGKFLLCSRTLKANHQQAARVSLGLPSLPPS
LLSYSASSTYFTGEGEERRRRRRKDGRRGGGGEWEERVVEAAWREGGGEA
VASAAQSQGMKLLRLFLALPSSLPPSSQTQEEEEGGEEGGKEGRRLVMET
EIVKGVSECLSAWTRDFEDEGEEGREEGAEGEDEDDWVLVPSSESPSSSS
SSSPQPALPPYSSAARRVLIEACRTAFVMYSIVLEEGGEEMEQGRKEGKL
ARGEREGGMEGWVVPSSLLMRDVRSLTLVLMREVREGGREGGREGGRRLF
LEALKLLSLLLTTTQYRESRKREEEEEERKGGREGGKEDMLWRLVAGRFK
VAFGQGGGKRRRRKGGREGRRSVSSCPPAWPRCWSLKEGGRKSKQQQQKQ
HPLKQLNARLASGGGSWPPSRRGREERGGGREGGGGGGGGRGGGGSGAKY
TLEAIDLTLLLAVLRSLLIPPSLLPSPPPSVSAQDQALEGGLIILACELY
PLALTLHLDDPHGLPPSFPPSLPPSLLAALLSMLCNLVAFHDVAKQALLH
FSSSSSASSSFLPSLLRLALRPSLPPSIAHPLLSLLRSLSLLPAGRHHLF
LPSSSPPSSSFLASSLLSLVPSLLLTPSPAHRRRRPAEVGKEGWVRLLGL
FKLLVNLTLAAEGQQLLHRHLPPTLLPSVLEDVVLFIKEGEKDKGKEGGW
DDGKEEEVEELTAQLCYLLRNLSFLRGGGGKGGGKASVLASGTLLRFLVC
DAMTHSKIQIRFPATVALWSLLHHSEKSTALLLRGDFLASSTSSSLSSSP
SSSVPSCVGVWQQIALAKKLAGRDALEGEEGREGEGEERLMMEGVQRALE
NIEALLSSFSTVASSSLSSSPSSLLKVGEGKGKVQGGRSGGGGDGAAAAA
TVAVIDESN*
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Synonyms
Publications