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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr23 | genome | chr23:171657..175298 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005488 | binding |
Vocabulary: INTERPRO
| Term | Definition |
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| IPR016024 | ARM-type_fold |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044782 | cilium organization |
Homology
BLAST of NO23G00380 vs. NCBI_GenBank
Match: CBJ26926.1 (hypothetical protein Esi_0050_0074 [Ectocarpus siliculosus]) HSP 1 Score: 66.6 bits (161), Expect = 6.000e-7 Identity = 51/155 (32.90%), Postives = 66/155 (42.58%), Query Frame = 0
Query: 116 LLSGYVLPPVPLSRRDNKRLFEFEVRFGTAG--EGERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWARLGKLLRLFREELLEDYPPEAFLARPSIVRRLLRTMREDGEGGREGGVVLEALATLQTLSEKLVAAVKLHAQPAFKP 269
L +G+ P V L R + LF+FEVRF TA GE G L + LR R+E++EDYPPE L RP RLL +R R V+ EAL+T L E+LV + +LH P+F P
Sbjct: 388 LCAGWRFPHVRLVRSEESALFDFEVRFRTASTPAGETG-----------------------------------------LLRCLRHLRDEIVEDYPPEVLLQRPGSFGRLLSLLRTPSASER---VIEEALSTASRLLERLVRSARLHQDPSFLP 498
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00380 ID=NO23G00380|Name=NO23G00380|organism=Nannochloropsis oceanica|type=gene|length=3642bp
ATGGCGTCGTTAGCCGACGATATTCGGAGGACGTTATTGTTGGGGGTAGG
GGAAGGAGGGAGGGAGGGAGGGAGGGTGTCGACGCCGATGCCGCCATTGC
CGATAAGTCTAAGTGGAAGTAGCAGCAGCGGAAGCAGAATGATGCCCCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAACAAGA
TCAACATCAACAACAACAACAACAACAACAACATGTCGATTCTTCCTTCT
CGCCCTCCTCTGCATCAGATCCGACAGAACAAGAAGGAAGGAGAAGGGCA
GGGACCGTTGGAGAGGTGGATGACGTGTACCTCCCCTCCCTCCTCCTCCT
CTCCGGGTATGTTCTCCCCCCCGTGCCGTTGTCAAGGCGCGATAACAAGC
GTTTGTTTGAATTCGAAGTGAGGTTTGGCACCGCCGGTGAAGGGGAAAGG
GGAGGAAGGGAAGGAGGGATCGGATCTCTGAGTGGGAGCATATTTTCGGG
AAGAGACACGGGTGGTGGAGATGGAGCAGGAGAAGGAGGAAGGAAGGAAG
GGAGGGAGGGAGGGCCATGGGCGAGGCTGGGTAAGCTTCTTCGGCTTTTT
CGCGAGGAGTTGTTGGAGGACTATCCTCCTGAAGCCTTTTTGGCTCGGCC
CTCCATAGTCAGGCGACTCCTCCGGACAATGAGGGAGGATGGGGAGGGAG
GGAGGGAGGGAGGGGTGGTTTTGGAGGCGCTGGCGACGTTGCAGACGCTG
AGTGAGAAGCTGGTGGCGGCCGTTAAGCTGCATGCCCAGCCGGCATTCAA
GCCCTTCCTCCTTCGCTCGTCCTCGTCCTCTCTCCCCGCCTACTTCACGC
CCTCCTTGCACCCACCGTCAACCTACCCTGCTTGTCCCACCGGAGCCAAC
GAGGCGGAGGAGGGGGAGGGAGGGAGGGAGGGAGGGGTAGTTTTGTCACT
CCCAGGCTTCGTCTTTTTGTGCCTGAAAGACCTGATTTCTCTCCTCATCA
AGATAGAGAGGGAAGACGCAGATAACACCTCTTCTTCCTCCTCTTCTTCC
TCCTCCTCCTCCTCCTTCTCCTCCTCGAGGACCCGCATTGCCACTCGAGC
CCTTGGAATCATCCACATCCTCCTCCCCTACCACGCCCTTCCCCTCCCTT
CCTCCCTCCCGTCCTCCCTCCCCTCCTCGTCCTCCCTTCCCCCCTCCTCC
CTGGCACACCAACAACGACTCCTTGCCCTCTTTCAGACCCTCGCTCCCGC
CGTCGGCGGCGACAGACGCTCCTCTCCCCCTCCTCCGTCCTCCCTTCACG
GTCCTCTCGTCCTTCTCACCCTCGCCCTCCTCCAACAAGCCCCTCCCTCC
CTTTTCCTCTCCCCCTCCCCCCACCCCTCCTCTTCCTCCTCCCCCCCTCC
CTCCCCCCCTCCCTCCCTCCTTCCTCCCGAAATCACCTCCCTCCTCATCC
TCTCTGCAGCCCACCATCCTCAGCTCCTCGGCCACCTCCTCGTCCTCCAT
CCCTCCATCCTCCCCGTCCTCCGCACTGCCCGCTCTCTGGTCCAGCGCGC
CACGCCCGCCCTCTCCCTCCTTCCCTCCTTTCCTCCGTCCCTTCCTTCTA
CCACTGAAGAAGACGAGGAGAGCGAGCACGAGATGGAGGGAGAGAGAGAG
GGAGGGGGGGAGGGAGGGAGGAAGGGATGGATGGCAGCAATGAAGGCCGC
CATTCCCCTCCTCGCTGTCGCACCAGCGCCCGCTCTGGTGCATCGCGCAG
TCCATCTCTCCATCGGTACATGCTCTTCCCTCCCTCCCTCCTCCTCTTCC
TCCACCTTCTTCTCGTCCACCTCCGCCAAAATCGGGGAAGGTGGCAGGAA
GGGCGAGAGGGCGGAAGCAGCCTCCCTCCTTCTCGCCCTCCTCTCTCTCC
CTCTTGACGAGAACCGGCTTGCCGCTTACCACTCCCTCGTCCAAGGCCTA
AGAGACTCCTCCCTCCTTCCCGCCCTCCCCCTCCTCCTCTTCCTCCAAGA
TGACGATGGAAAGACAAAGGAGGGGGGGATGAAGGGAGGGAAGGGAGGCG
GCTTCGCCCTCTTTCACCACCTCCTCCTTCACTCTCTCCAGGATCCCGCT
TTAGGCGTTCGACAAGCCACCTGGGAAGTCCTGTCCCGGCTCATGTCCCT
CGAAAACCTTTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCGTTCCTGCCT
TGCTGGCCGTAAGAGGGTGGGTGGACCAGGAGGAGGAGGAGGGGGAAGGA
GGGAGGGAGGGAGGGGTGGGAGGACCGGGACCGAAGGGATTGATTATTCG
ATACTTGCTTCAAGTGGTCAAGGCGGCGGGGGAGGGAGGGGCGGAGGAAG
GGGCGGAGGGAGGAGCGGATGTGATGATAGCAGTGTTTGATTTATATTCA
CCGAGTAAGAGCATACGATTGGGAGGGCTGCGGCAGCTGCATGCCCTCCT
TCCCTCCCTCCTTCCCTCCCTTCCTCCCTCGTGCTCCTTGGCACCGGAGA
CCGTTTTCGCGGAGGAGGAGAGGGAGGGAGGAGGAGGACGAGCAAGGGAA
GGAGGAAGGGGGGCGATGTCAGCAGCTGCTGCATGGGCAGGCCTGCGCTC
GCAGAGCCGCACAGCGGTCGGGAAGGAGGGAGGGAGGGAGGGGGGGAGGA
GCCGGTTGATCGCCCTGTGTGAGTTGCTCACTGATCCTGCTGGTGCTTTG
AGTGACGAGGAGCGATTGGTCGCTGCCCAGGACCTGACCCTCCTCCTCCT
CCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGCAGCAGC
AGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAGCAG
CAGACACCTGAAGGTGCCGCAAGGACCTCCCTTTCCTCCCGCCCTTCCTC
CCCCACCTCCGACACTGTCCTCGAGAGCGTCCTCGCCGCCGCCGCCTCCC
TCCTCCAATCTTCTTCTTCCCGCCTCCCTTCCTCCTCCTCCTCCTCTTCC
TCTTCCTCTCCCTCTTCAAGGCAGCTCGAGGAGGCAGGAGTCGAGCTTCT
CCTCGCTCTGGCTTGGGGGGGCGCGTGGGACCCCTCCATCCCTCCCTCTC
TCCCCTCCCTCCTTCGGCACTTCCTCCCTCCCTTCCTCCCCTTCCTCTTC
CACCCTTCCTCCTTCCTGCGTCGCACCCTCCGCATGGCTCTGGTCCCGTT
CCTCTTCCATGCCCACCTGCCTTGCTGGACGGGAGGGAGGGAGGGAGGGA
AGGAGGGAGGGGCCAGTGTCTCCACCCGTCCTCCGGAAGAGATGATCCTG
AGGCAAGGGCGTAGCGATGGACAAGGAGGGAGGAGGGAGGAGGTACTAAC
CTACTACATGCCTCCTCCCTCCTTCCCTTCTTCCCCCTCTTCCTCTACAC
CGTCCTCGTCCTTGCCCATCCTGGCCTTCCTCCCCCAATGCTTCAACTTC
AGAAACCTCTTCCCCCTCCCATCCTCCTCCCCTCGACCCCTCCTTCCCGT
CTACTCCGTCCCTCCTTCCCTCCCTCCCCCCTCCCCACCGGCTCCACCCT
CCTTCACCTCCTCGAAATCGTCCTCCCCCTCTGGCAAGCCGCTTGCCCAC
CCTCCCTCCCTCCCTCCTTCCCTCCCTCTCTCCCGCCCCTAG back to topprotein sequence of NO23G00380.1 >NO23G00380.1-protein ID=NO23G00380.1-protein|Name=NO23G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1214bp
MASLADDIRRTLLLGVGEGGREGGRVSTPMPPLPISLSGSSSSGSRMMPQ
QQQQQQQQQQQQQQQQDQHQQQQQQQQHVDSSFSPSSASDPTEQEGRRRA
GTVGEVDDVYLPSLLLLSGYVLPPVPLSRRDNKRLFEFEVRFGTAGEGER
GGREGGIGSLSGSIFSGRDTGGGDGAGEGGRKEGREGGPWARLGKLLRLF
REELLEDYPPEAFLARPSIVRRLLRTMREDGEGGREGGVVLEALATLQTL
SEKLVAAVKLHAQPAFKPFLLRSSSSSLPAYFTPSLHPPSTYPACPTGAN
EAEEGEGGREGGVVLSLPGFVFLCLKDLISLLIKIEREDADNTSSSSSSS
SSSSSFSSSRTRIATRALGIIHILLPYHALPLPSSLPSSLPSSSSLPPSS
LAHQQRLLALFQTLAPAVGGDRRSSPPPPSSLHGPLVLLTLALLQQAPPS
LFLSPSPHPSSSSSPPPSPPPSLLPPEITSLLILSAAHHPQLLGHLLVLH
PSILPVLRTARSLVQRATPALSLLPSFPPSLPSTTEEDEESEHEMEGERE
GGGEGGRKGWMAAMKAAIPLLAVAPAPALVHRAVHLSIGTCSSLPPSSSS
STFFSSTSAKIGEGGRKGERAEAASLLLALLSLPLDENRLAAYHSLVQGL
RDSSLLPALPLLLFLQDDDGKTKEGGMKGGKGGGFALFHHLLLHSLQDPA
LGVRQATWEVLSRLMSLENLSLPPFLPPSLVPALLAVRGWVDQEEEEGEG
GREGGVGGPGPKGLIIRYLLQVVKAAGEGGAEEGAEGGADVMIAVFDLYS
PSKSIRLGGLRQLHALLPSLLPSLPPSCSLAPETVFAEEEREGGGGRARE
GGRGAMSAAAAWAGLRSQSRTAVGKEGGREGGRSRLIALCELLTDPAGAL
SDEERLVAAQDLTLLLLQQQQQQQEEEEEEEQQQQQQQQQQQQQQQQQQQ
QTPEGAARTSLSSRPSSPTSDTVLESVLAAAASLLQSSSSRLPSSSSSSS
SSSPSSRQLEEAGVELLLALAWGGAWDPSIPPSLPSLLRHFLPPFLPFLF
HPSSFLRRTLRMALVPFLFHAHLPCWTGGREGGKEGGASVSTRPPEEMIL
RQGRSDGQGGRREEVLTYYMPPPSFPSSPSSSTPSSSLPILAFLPQCFNF
RNLFPLPSSSPRPLLPVYSVPPSLPPPSPPAPPSFTSSKSSSPSGKPLAH
PPSLPPSLPLSRP* back to top
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