NO23G00360, NO23G00360 (gene) Nannochloropsis oceanica

Overview
NameNO23G00360
Unique NameNO23G00360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4627
Alignment locationchr23:165928..170554 -

Link to JBrowse

Properties
Property NameValue
Descriptionp-hydroxybenzoic acid efflux pump subunit aaeb
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:165928..170554 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR006726PHBA_efflux_AaeB/fusaric-R
Homology
BLAST of NO23G00360 vs. NCBI_GenBank
Match: EWM22996.1 (p-hydroxybenzoic acid efflux pump subunit aaeb, partial [Nannochloropsis gaditana])

HSP 1 Score: 464.9 bits (1195), Expect = 8.800e-127
Identity = 247/442 (55.88%), Postives = 307/442 (69.46%), Query Frame = 0
Query:  987 RQPVKVALAICLASLMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAGGKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFLQKAPDPVEAMANAQILHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLEVEERDRAMLSSIQGAVHELNQATTSALEEAYEAVKGMTDR-KWKDEYEDR------------TGTTXDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLSTEAAQAVALLRLRQAYVKIQDWVDVYFEEHIRENWTKDDLVFVSADLILSLCGMIFAVEGLGKGLLGLGHAIRELVEREKGNYYRL 1416
            RQP+KVALA  L +L +L   GP T WG+IAVCQ++SSHPGSSFK G  RIQGTVLGGMFGIV+L+W  W S LA++ SLT WVF C+ ++ S  +G+VA++AA TAP+I++GP+ G  GAMIRI QT+LGS +YV +DN FWPVRAKLDLRRELL SL  FR+LWG TFSIFLQK  DPV A+  AQ +H  LT+S ++Q+ YI+LA DEPEL+HKPFH   Y+ V ++L++VSLFMAML+R+S  FPLE+ ERDRA+L+SIQ AV EL + T  AL++A+EAV  MT+R +W++                 +                                        L  +   A+ALL+L +AYVKIQDWVD YFEEHI+ NW  D LV VSADLILSL GMIFAVE LG+GLLG+GHA+RELVEREKGNYY L
Sbjct:  108 RQPLKVALAYVLVTLTMLILTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGEAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTEREEWREXXXXXXXXXXXXXXXRCSAVMPLGDGGDLPPPQPREGRASSHGAHRESSGHRPTRSAALPPDTVPALALLQLGEAYVKIQDWVDGYFEEHIKGNWANDHLVLVSADLILSLNGMIFAVEALGQGLLGVGHALRELVEREKGNYYML 549          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: EWM22994.1 (hypothetical protein Naga_100761g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 339.7 bits (870), Expect = 4.300e-89
Identity = 202/436 (46.33%), Postives = 260/436 (59.63%), Query Frame = 0
Query:  137 PHRVWASPLKT-STAGRTSNTNA-------GNFIHGDAPFSQMTLAALIETQAEGEQGSMQYKPSGFRSHSESHQHNNQASFSTA-STPWRQRESSLE-----DPSGSVSTASRDTHSQKPTRPPRKHGCKRGPAYLHFRSKIEMAIRTASAAGFSTGIMLFVWSWAHSLSWFGVTLAISGTRKSLGETFMAAFDFWKGGLLVLPWIYALNVVRSHAILTLLGLFVSLIFIIWFPGVSDSGKSMATIFLTVVVLTGDKDPVVHYNSLVRDLYMTMIIANAFSVMALLLPLPLPSLALFDVRLKVKIIRHRLGSILRGYDHTFDLGQEVHYSMIEQLLEEISRALVEIRAQLPQVKWEMVVLRFKQYSHAHLVAYVETVEKQLELFKGMRLSLRRMSNNATHQEFLKYLQEPLSHLLEACVAVSDTATRQIESELVV 559
            PH   +SP +   T G++ N  A       GN        SQ      I        G +    +  RSH ES Q  +          P  +R SS        P       S    +  P +  +      G A +HF  K+ +  RTA A   +T    F W+WAH L+WF VTL +SGT +SLG T   AFDFWKG  +VLP +Y +   R    LT+ GLF S+ F+IW PG+SD GK MATIFLT+VV+    DP + YN +VRD+  T++ ANAFS++ALLLP P PSLAL DVR+K+ ++RHRLGSILRG +  F LG+EVHYSM+EQLL+E S  + +I+ Q+P VKWE V+LR        L +++ T+E QLELF+GMRLSLRRMSNNATHQEFLKYLQEPLS +++A VAVSD A R IE+ELV+
Sbjct:   83 PHPSLSSPTEVRETNGKSGNDEAHGNAQADGNNPRRPPSSSQSPARISIHVPPTSTGGKLPTSVNNDRSHVESTQEGSPCRHDAGHRRPVGKRRSSRSKRPAWHPLSFFQRRSARRRATAPVKAAQGPSPLLGAALMHFHRKLRLGFRTALAIALATTTSQFFWNWAHILTWFSVTLVVSGTHESLGRTLRTAFDFWKGFTVVLPLVYLIRPNRDSTPLTITGLFFSVAFLIWLPGISDPGKRMATIFLTIVVIYCVLDPALLYNHMVRDVCFTLLFANAFSIIALLLPFPSPSLALLDVRVKLGMVRHRLGSILRGCNEAFSLGEEVHYSMLEQLLQETSATVADIKEQIPFVKWEAVLLRLPVSMPGQLESFLTTIEAQLELFRGMRLSLRRMSNNATHQEFLKYLQEPLSQVVKASVAVSDAAARHIEAELVL 518          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: EWM30522.1 (hypothetical protein Naga_100013g27 [Nannochloropsis gaditana])

HSP 1 Score: 194.9 bits (494), Expect = 1.700e-45
Identity = 320/1367 (23.41%), Postives = 526/1367 (38.48%), Query Frame = 0
Query:  197 SHSESHQHNNQASFSTAS--TPWRQRESSLEDPSGSVSTASRDT--HSQK-PTRPPRKHGCKRGPAYLHFRSKIEMAIRTASAAGFSTGIMLFVWSWAHSLSWFGVTLAISGTRKSLGETFMAAFDFWKGGLLVLPWIYALNVVRSHAILTLLGLFVSLIFIIWFPGVSDSGKSMATIFLTVVVLTGDKDPVVHYNSLVRDLYMTMIIANAFSVMALLLPLPLPSLALFDVRLKVKIIRHRLGSILRGYDHTFDLGQEVHYSMIEQLLEEISRALVEIRAQLPQVKWEMVVL------RFKQYSHAHLVAYVETVEKQLELFKGMRLSLRRMSNNATHQEFLKYLQEPLSHLLEACVAVSDTATRQIESEL---VVGAWLRKYVKQRRQNQRLDKQRS---REIRAEPHQSTVKEGGASMRQHRRQQT-MSRAVKYQ---LQSRRHSYDLDSLFTIVESRAEVLMKEFVKARLAILCGFKAVSEDGMGDPLSYNLRS--STKPATTIDMNP--TSVTNTIPVTILSQSDSGSTKNKLVTSSSAIRRPSEDSNEGGDADSRKGDSEETAPHQLAPAQEDTMHPKPQQPQKVHWTVDGLE--------LQRHQSGQAVYNAFAAEYSKLGYFNVIPRHAFLLDICNYVRTLPILITACCARKDGDDPFSHFSSTAQNSKLPWSVWAKDKLIGWRGSYLEPALAAIGLLRKRSNVVESAAVMEASEGGRDAAGVGVSEGGTVGTNFKTAKTSTAATTPKASSHYSSSRGRVSEFQGPIRSMDSISISSNFRIPHDRSHQHXXXXXSTRKHRSTKGANGSQKFFSRLRQPVKVALAICLASLMVLYD---VGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAGGKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIF---------------------------------------------------------------------------------------------LQKAPDPVE-----------------------AMANAQILHDTLTSSFSLQKK--YISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLEVEERDRAMLSSIQGAVHELNQATTSALEEAYEAVKGMTDRKWKDEYEDRTGTTXDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLSTEAAQAVALLRLRQAYVKIQDWVDVYFEEHIRENWTKDDLVFVSADLILSLCGMIFAVEGLGKGLLGLGHAIRELVEREK 1410
            S S S     +AS S+AS  TP   R+ ++      V+T  R T  H+ +   RPP     +  P+   F  K+  A R A A   +TG+ + V+ W+H ++WF +TL+ISG  ++LG T       W G  + +P  + L  +    +LT + +F+  + +     ++++ K ++ IF+T VVL     P      L+ DL   ++ AN F  + +L   P P LA+   R +++ ++  LG  L     ++ L  +     +E +++E    +  IRA LP V +E+ +L         + ++ H+V Y+  +E QLE  +GM ++L  M  NATH EF++ ++  L  ++     V +     + + L   +   W  +   + R   R  K +S   RE      QS+  +G     +H+     M  A K Q   L SRR +  L S              +  +AR A  C  +  +   +  P+S   R   S  P +  D++P    V + +P  + S   +   +       + +R       +G   D R           + P  E  +  K +Q      ++D L         L+R ++      +F  +  + GY N++PR+AF+LD+  +V                                                      AA    R   NV  S   +E S                  T+ +  KT  +  T              S F    R++                                    G  + +   RQP+KVALAI LAS++VL D   +G  T W  I V Q MSSHP S+FK G +R+QGTVLG + G+ +  W    +K+AI+  LT WVF+C+ S+ S ++G+ A  A  TAP+I+IGP+ G  GA++RI Q +LG+++YV +DN  +P RAK+ LR +L  S+     L     +IF                                                                                             + K P PV+                         A A++  +T+    +L K+  YIS A DEPEL+HKPF    Y  V     ++  ++ ML RS+ +FP  +   D  ML +    +  L +   +   +    ++ +  +         TG +  +                                P++       V + RLRQ +  IQD +D    ++  +     D V  S D I+ L GMI++   +    +    A+REL  +EK
Sbjct:   84 STSPSRHTYGEASPSSASVRTP---RKDNMGIYLTRVATGLRSTVKHAFRWRKRPPGPRDVR--PSVRAFYYKLLNASRPALACFLATGVSM-VYPWSHKVTWFSITLSISGVGRNLGHTLAGIRQQWMGITVAVPLCFLLKFLEFSKVLTAIAIFLVSVAVCGSDMLNEAAKQVSLIFITWVVLVALVTPDTTMEDLLLDLIKAVLGANIFCTVVML--FPSPRLAVRLCRWRLEELQEVLGRFLEDAVDSYCLQDDSGLHDLEAVIDEAVSLIETIRALLPDVDFELALLSCGCQRSASRRTYDHVVEYLGILEDQLENCRGMAVALSDMYPNATHSEFVRAMRPGLLDVVTESKKVLEGTCYHLSAALQYWIQQKWWWRLCYRGRGPWRPPKTQSFVGRECATRSAQSSRGDG-----KHKHVSIHMEDAGKPQHGGLFSRRPNSSLYS-----------EGGDHEQAR-APNCAAEENTTMSLSGPISEQEREHLSRAPPSFYDIDPQCEDVEDCVPGELFSPPKAALARVLHALLKTRMRVVYGVELKGTAPDDR-----------IEPVHE--LPSKMRQDDLRVLSIDRLAMRSPRSVVLERSRTAAVAAASFQKDSERRGYMNLLPRNAFVLDLKMFV------------------------------------------------------AAFERHRILCNV--SMVAVEPS-----------------ATSTREQKTCCSLAT--------------SVFVNAYRNI----------------------------------CRGPGEGWDAWRQPLKVALAILLASIVVLADDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPVVNKVAIVFILTAWVFVCAFSRGSRTYGEAATSAGLTAPIIVIGPVVGSSGAVVRISQVILGTVIYVGVDNLIFPTRAKILLRSQLCESVEKLGNLCRDGLAIFQTEIALGSRNKDEQNENRGDTVEQHNASPARNKIVGTFDDGGSTGIVTEADEEPQTSLTFKNDETPEFTILEKVKRSALFRFVGWGKGKNGKKIHKTPKPVKMTETHTSPPTPAVETSAHLMAVVQAAEARMRRNTVIIQQALSKEELYISYASDEPELWHKPFQRMAYLKVYAIQLRMHKYLLMLHRSAASFPRTLARCDLEMLQAYGSIILRLQRTLEAVFNDVLLRLRRLAKK------SSSTGASAQS--------------------------MENLSSPIMK---QGGVNVFRLRQEFCDIQDAIDDLVADYFAK-----DPVLTSLDFIVPLNGMIYSTRKMSPECVAFVQAVRELKFQEK 1251          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: PTQ39067.1 (hypothetical protein MARPO_0047s0049 [Marchantia polymorpha])

HSP 1 Score: 92.4 bits (228), Expect = 1.200e-14
Identity = 78/288 (27.08%), Postives = 142/288 (49.31%), Query Frame = 0
Query:  991 KVALAICLASLMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAG---GKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFL-QKAPDPVE-AMANAQILHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLE-VEERDRAMLSSIQGAVHELNQATTSALEEAYEAVK 1273
            KV+LA+ LA+L           W +++V   M +  G SF+    R+QGTVLG ++  ++L+  +   +L +L +L  WV L S  + S   G   V+A  TA ++M+G   G    + A++RI Q  +G L  ++++   WP RA +  RREL+ SL+  R+      +++     P+  +  + + + L   + +  + Q    S A  EPEL+  PF   +Y  ++   S++   +  +V S  A   E + E+ R ++  +Q ++  L     S+L    E ++
Sbjct:  686 KVSLAMSLAALAGCMYNEAYAFWAMVSVAFIMQNQQGGSFRMANLRLQGTVLGSIYAYLMLNLMSKHPQL-LLLALVPWVVLLSYLRFSKLFGASGVIAGLTAAIVMLGAEGGMSIQQLAVVRITQNFIGVLALILVETIIWPERAVILSRRELVLSLIDLRDCVKAVVAVYTGHHCPEHRKLVVLDIKKLEGQIRARIADQTILQSEAVMEPELWSHPFPAEIYSKLLHIQSRMHDLLHFMVCSLHAATEECLSEQIRKLVGPLQTSLVALEDEVLSSLHLLQELLQ 972          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: PTQ39069.1 (hypothetical protein MARPO_0047s0051 [Marchantia polymorpha])

HSP 1 Score: 92.4 bits (228), Expect = 1.200e-14
Identity = 78/288 (27.08%), Postives = 142/288 (49.31%), Query Frame = 0
Query:  991 KVALAICLASLMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAG---GKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFL-QKAPDPVE-AMANAQILHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLE-VEERDRAMLSSIQGAVHELNQATTSALEEAYEAVK 1273
            KV+LA+ LA+L           W +++V   M +  G SF+    R+QGTVLG ++  ++L+  +   +L +L +L  WV L S  + S   G   V+A  TA ++M+G   G    + A++RI Q  +G L  ++++   WP RA +  RREL+ SL+  R+      +++     P+  +  + + + L   + +  + Q    S A  EPEL+  PF   +Y  ++   S++   +  +V S  A   E + E+ R ++  +Q ++  L     S+L    E ++
Sbjct:  401 KVSLAMSLAALAGCMYNEAYAFWAMVSVAFIMQNQQGGSFRMANLRLQGTVLGSIYAYLMLNLMSKHPQL-LLLALVPWVVLLSYLRFSKLFGASGVIAGLTAAIVMLGAEGGMSIQQLAVVRITQNFIGVLALILVETIIWPERAVILSRRELVLSLIDLRDCVKAVVAVYTGHHCPEHRKLVVLDIKKLEGQIRARIADQTILQSEAVMEPELWSHPFPAEIYSKLLHIQSRMHDLLHFMVCSLHAATEECLSEQIRKLVGPLQTSLVALEDEVLSSLHLLQELLQ 687          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: OAE27406.1 (hypothetical protein AXG93_2015s1350 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 91.3 bits (225), Expect = 2.600e-14
Identity = 80/297 (26.94%), Postives = 142/297 (47.81%), Query Frame = 0
Query:  991 KVALAICLASLMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAG---GKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFL-QKAPD----------PVEAMANAQILHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLE-VEERDRAMLSSIQGAVHELNQATTSALEEAYEAVK 1273
            KV+LA+ LA+L           W +++V   M +  G SF+    R+QGTVLG ++  ++L+  +   +L +L +L  WV L S  + S   G   V+A  TA ++M+G   G    + A++RI Q  +G L  ++++   WP RA +  RREL+ SL+  R+      +++     P+           +E    A+I   T+     LQ + +     EPEL+  PF   +Y  ++   S++   +  +V S  A   E + E+ R ++  +Q ++  L     S+L    E ++
Sbjct:  711 KVSLAMSLAALAGCMYNEAYAFWAMVSVAFIMQNQQGGSFRMANLRLQGTVLGSIYAYLMLNLMSKHPQL-LLLALVPWVVLLSYLRFSKLFGASGVIAGLTAAIVMLGAEGGMSIQQLAVVRITQNFIGVLALILVETIIWPERAVILSRRELVLSLIDLRDCVKAVVAVYTGHHCPEHRKLVVLDIKKLEGQIRARIADQTI-----LQSEVVM----EPELWSHPFPAEIYSKLLHIQSRMHDLLHFMVCSLHAATEECLSEQIRKLVGPLQTSLVALEDEVLSSLHLLQELLQ 997          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: GAQ91269.1 (hypothetical protein KFL_007550015 [Klebsormidium nitens])

HSP 1 Score: 86.7 bits (213), Expect = 6.500e-13
Identity = 69/288 (23.96%), Postives = 135/288 (46.88%), Query Frame = 0
Query:  985 RLRQPVKVALAICLASLMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAGGKG----AMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFLQKAPDPVEAMANAQI--LHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVS-LFMAMLVRSSIAFPLEVEERDRAMLSSIQGAVHELNQATTSALE 1266
            +L+   KVA A+ +  L+ +        W V+ +   +  + G+SF+  + R+QGTV G ++G +++   +    +A+   L  WV L +  + S ++G   VVA  TA +IM+G  +  +     A+ RI +T +G + ++V++   WP RA L +R  L+++L   R  +      ++++        A  Q+     TL +  + Q   I  A  EP+ +  PF + VY  +++   +++ L  AM     +       E+   ++  +QG +  L       L+
Sbjct:  507 KLKAGSKVACAVGVGGLLGIIAGRNYGYWAVVTIAFIIGGYQGTSFRAAWLRLQGTVAGAIYGYLVILVVH-GHPVAVGALLVPWVALVTFIRYSKAYGYSGVVAGFTAAIIMLGYKSSNQNVQDYALGRITETCIGIVTFIVVETCVWPNRAALLVREALISALQDARACFAAIVRSYMEEECMQCRQKAVQQVAATEKTLAALMAKQGPLIDEAASEPDFWRAPFPIPVYCKLLDLQKRMARLLYAMDCALRVTGMETAGEQTEKLVKPLQGPLRSLEAEVLLTLD 793          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: OAE19487.1 (hypothetical protein AXG93_1040s1510 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 86.3 bits (212), Expect = 8.500e-13
Identity = 75/291 (25.77%), Postives = 143/291 (49.14%), Query Frame = 0
Query:  983 FSRLRQPVKVALAICLASLMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFG----IVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAG--GKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFLQKAPDPVEAMANAQI--LHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLE-VEERDRAMLSSIQGAVHELNQATTSAL 1265
            + ++ + +K++LA+ +A+L  +        W V+ V   + +H G SF+    R+QGTV+G ++     IVI D  ++     +L +L  WV + S  + S   G   V+A  TA ++M+G       + A+ RI +  +G L  + +++  +P RA +  R+EL++SL+  R+      + +     D    +  + I  L   L S  + Q K  + A  EPEL++ PF   +Y  +V   +++   +  +V S  A   E +  + R ++  +QG++  L +   S+L
Sbjct:  551 YQQVVRALKISLAMAIAALAGILYNKKFAFWAVVTVGFIIQNHQGGSFRMANLRLQGTVIGSIYAYLMVIVIHDHPDF-----VLVALIPWVVVLSYLRFSKLFGAAGVIAGLTAAIVMLGSNGAPIQELAVTRITENFIGVLALIFVESLVFPDRAAILCRKELVSSLVDLRDCVKAVVAAYTGHFCDEHRRIVASDIKKLEAQLRSRIAEQSKLQAEAVMEPELWNVPFPAEIYGQLVNIQTRMLDLLHFMVLSLHAATEECLGSQIRKLVGPLQGSLDALEEEVLSSL 836          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: PTQ37727.1 (hypothetical protein MARPO_0055s0015 [Marchantia polymorpha])

HSP 1 Score: 86.3 bits (212), Expect = 8.500e-13
Identity = 75/291 (25.77%), Postives = 143/291 (49.14%), Query Frame = 0
Query:  983 FSRLRQPVKVALAICLASLMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFG----IVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAG--GKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFLQKAPDPVEAMANAQI--LHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLE-VEERDRAMLSSIQGAVHELNQATTSAL 1265
            + ++ + +K++LA+ +A+L  +        W V+ V   + +H G SF+    R+QGTV+G ++     IVI D  ++     +L +L  WV + S  + S   G   V+A  TA ++M+G       + A+ RI +  +G L  + +++  +P RA +  R+EL++SL+  R+      + +     D    +  + I  L   L S  + Q K  + A  EPEL++ PF   +Y  +V   +++   +  +V S  A   E +  + R ++  +QG++  L +   S+L
Sbjct:  555 YQQVVRALKISLAMAIAALAGILYNKKFAFWAVVTVGFIIQNHQGGSFRMANLRLQGTVIGSIYAYLMVIVIHDHPDF-----VLVALIPWVVVLSYLRFSKLFGAAGVIAGLTAAIVMLGSNGAPIQELAVTRITENFIGVLALIFVESLVFPDRAAILCRKELVSSLVDLRDCVKAVVAAYTGHFCDEHRRIVASDIKKLEAQLRSRIAEQSKLQAEAVMEPELWNVPFPAEIYGQLVNIQTRMLDLLHFMVLSLHAATEECLGSQIRKLVGPLQGSLDALEEEVLSSL 840          
BLAST of NO23G00360 vs. NCBI_GenBank
Match: OAE24457.1 (hypothetical protein AXG93_1615s1100 [Marchantia polymorpha subsp. ruderalis] >PTQ40618.1 hypothetical protein MARPO_0039s0105 [Marchantia polymorpha])

HSP 1 Score: 85.9 bits (211), Expect = 1.100e-12
Identity = 80/337 (23.74%), Postives = 162/337 (48.07%), Query Frame = 0
Query:  957 SHQHXXXXXSTRKHRSTKGANGSQKFFSR--------------LRQPVKVALAICLASLM--VLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVILDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGPMAGG--KGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRELWGLTFSIFLQKAPDPVEAMANAQI--LHDTLTSSFSLQKKYISLAFDEPELFHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLE-VEERDRAMLSSIQGAVHELNQATTSALEEAYEAVK 1273
            SH+H       +K  +    +   +FFS+               R+  K+AL++ +A+    ++      + W  + V   + ++ G S++    R+QGTVLG ++G + L   +     A L +L  WV L S  + S+++G   +V+A TA ++++G       K AM RI +T +G L +V ++   +P RA L +R+EL++SL+  R+      +++ ++      ++A  +I  L   L +SF  Q    + A  EP+L+  PF   VY  ++    ++   +  +V S  A   + + E+ + +L  ++ ++  L +   S ++   + ++
Sbjct:  516 SHRHGVLPSKLKKGTAPVNPSAVSRFFSKAHEILHKCGASRAQARRSFKIALSMVMAATFGNLIVSQEAHSFWATVTVGFIIGNYQGGSWRISSLRLQGTVLGAIYGYLALR-VSKNHSWANLLALIPWVVLSSFVRYSTAYGYSGLVSAFTAAVLILGGFENDIRKYAMDRITETFVGVLSFVFVETVVFPERAVLLVRKELVSSLIGLRDCVAAIVAVYTEQECLDCRSIAVHEIKELEQQLRASFVKQSALRAEACLEPDLWFVPFPGEVYSNLIAIEGRMLDLLFFMVCSLHATTEDCLTEQMQKLLEPLRTSLTALQEEVLSTIDSLQQVLQ 851          
The following BLAST results are available for this feature:
BLAST of NO23G00360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22996.18.800e-12755.88p-hydroxybenzoic acid efflux pump subunit aaeb, pa... [more]
EWM22994.14.300e-8946.33hypothetical protein Naga_100761g1, partial [Nanno... [more]
EWM30522.11.700e-4523.41hypothetical protein Naga_100013g27 [Nannochlorops... [more]
PTQ39067.11.200e-1427.08hypothetical protein MARPO_0047s0049 [Marchantia p... [more]
PTQ39069.11.200e-1427.08hypothetical protein MARPO_0047s0051 [Marchantia p... [more]
OAE27406.12.600e-1426.94hypothetical protein AXG93_2015s1350 [Marchantia p... [more]
GAQ91269.16.500e-1323.96hypothetical protein KFL_007550015 [Klebsormidium ... [more]
OAE19487.18.500e-1325.77hypothetical protein AXG93_1040s1510 [Marchantia p... [more]
PTQ37727.18.500e-1325.77hypothetical protein MARPO_0055s0015 [Marchantia p... [more]
OAE24457.11.100e-1223.74hypothetical protein AXG93_1615s1100 [Marchantia p... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00360.1NO23G00360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601813gene_8376Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101171g2gene7453Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00360.1NO23G00360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00360 ID=NO23G00360|Name=NO23G00360|organism=Nannochloropsis oceanica|type=gene|length=4627bp
AAAATCCATAGGAACCAAAAGATTTACGTCCTTGAAGGAGTGGTGGCGCA
GCCTTTCAACCCCGACGAGATGAGTTAGAATCCGGAAGTCCTCAAGATCC
TACCTCGTGCGCCCAAGTACGCGAAGTGTCTGAGCATGGACTCTGACGCT
GAGAGGGGCACAGATGAGGCAGGGGCGCCCTCGTACTCGTCATCAAATGG
GCCGTCCTTGCCCTTGCATGTGCTCTCCCCCGCACTCTTAGACCATGTCG
GGCCTCCGAGCCGACACTGCAGCCAATGGAAATCCTCAGAGATGACGCGT
CAGGATGGGCAGTCGGATACTGGTAATTATTATCGGCGCCGCTCCACCTC
GGCCTCAAACGACACCTCCACCCATAACACTTCACGCTTCCGTCGAAGCA
GCTGCGCCTCCACAGCGGGCGGCAGTGATGCAGACGATGACGATGAAAAC
TGGAGCAATATCTACGTCGACGACGACTCTGATGACTCGGACTGTGACTC
AATAGGAAACCCCTGTATGTCCCGGCGCTTTTCGGCGGTCATGCCGCATC
GCGTCTGGGCCTCTCCTCTCAAAACTTCCACGGCAGGCCGTACTAGTAAC
ACCAATGCAGGCAACTTCATCCATGGCGATGCACCTTTCTCCCAGATGAC
ACTGGCAGCCTTGATTGAAACGCAAGCGGAAGGCGAACAAGGCAGCATGC
AATACAAGCCAAGTGGCTTTCGCTCCCATAGTGAGTCTCACCAGCACAAC
AACCAAGCAAGTTTCTCCACAGCATCCACGCCTTGGCGGCAGCGTGAATC
ATCGCTGGAAGACCCCAGCGGCAGTGTCAGCACTGCAAGCAGAGACACTC
ACTCCCAGAAACCGACGCGGCCCCCTAGAAAGCATGGCTGCAAGAGGGGT
CCGGCCTACTTACATTTTCGGTCAAAGATTGAGATGGCTATTCGCACAGC
CTCGGCAGCAGGATTTTCCACAGGCATCATGTTATTTGTGTGGAGCTGGG
CACACTCTTTATCCTGGTTTGGAGTCACGCTTGCCATCTCAGGAACGCGA
AAGAGCTTGGGAGAAACATTTATGGCAGCATTTGATTTTTGGAAAGGCGG
TTTGCTGGTCTTGCCATGGATCTACGCCCTGAATGTGGTGCGCTCCCACG
CTATCCTGACTTTGTTGGGGCTTTTCGTGTCTCTGATATTTATAATTTGG
TTCCCGGGTGTCTCGGATTCGGGTAAGAGCATGGCGACCATTTTCCTAAC
AGTGGTCGTCTTGACAGGTGACAAAGACCCGGTAGTGCATTACAACAGTC
TTGTACGCGACCTGTACATGACAATGATCATAGCGAATGCCTTCTCTGTG
ATGGCATTGCTGCTACCATTGCCTTTACCTTCGCTTGCCCTCTTCGATGT
CCGCCTGAAGGTTAAGATAATCCGACATCGTTTAGGATCTATATTGCGTG
GGTATGACCACACGTTCGATCTCGGTCAGGAGGTTCACTACAGTATGATT
GAGCAGCTGTTGGAGGAAATATCAAGGGCTCTTGTCGAGATCAGAGCACA
GCTTCCTCAGGTAAAGTGGGAAATGGTCGTGTTGCGCTTTAAGCAATATT
CGCACGCGCATCTTGTCGCCTACGTGGAGACGGTTGAGAAGCAATTGGAG
CTTTTCAAGGGTATGCGTTTGTCCTTGCGTCGAATGAGCAACAATGCCAC
GCATCAGgtacgatctttgcttcctctatgctctcagtatatctcccatt
cataaataataataatatctgcaccctcgacccattttcttacgtcccat
cctacctcttcaatcagGAATTTCTTAAGTACTTGCAAGAGCCCTTGAGT
CACTTGCTGGAGGCGTGTGTGGCGGTATCAGACACAGCCACTCGGCAAAT
TGAATCAGAGCTAGTGGTGGGCGCGTGGTTGCGGAAGTATGTTAAACAAC
GCCGCCAGAATCAGCGGCTAGATAAGCAGCGATCTCGGGAGATTCGCGCG
GAGCCCCATCAATCTACGGTAAAAGAAGGTGGAGCAAGCATGCGTCAGCA
TCGGCGCCAGCAAACCATGTCTCGAGCGGTAAAATACCAGCTCCAATCTC
GCAGACATTCTTATGATTTGGATAGTCTTTTTACAATCGTTGAATCGCGG
GCGGAGGTGCTGATGAAAGAGTTTGTCAAAGCTCGCTTAGCCATCTTGTG
TGGCTTCAAAGCGGTGTCTGAGGACGGCATGGGTGATCCCTTGTCATATA
ATTTGCGTAGTTCTACGAAGCCTGCAACCACTATCGATATGAACCCGACG
TCCGTGACAAATACAATACCGGTGACGATCCTCAGCCAGAGTGATAGCGG
CAGTACCAAAAACAAGTTGGTGACAAGCAGCAGCGCAATCAGGAGGCCCA
GCGAGGACAGCAATGAGGGCGGTGATGCCGACAGTAGGAAAGGAGATAGT
GAGGAAACCGCGCCACATCAATTAGCACCTGCGCAAGAGGACACGATGCA
CCCTAAGCCGCAGCAGCCACAGAAGGTACACTGGACCGTGGATGGGCTGG
AACTCCAAAGGCATCAGAGCGGGCAAGCGGTGTATAACGCATTTGCGGCT
GAATATTCCAAGTTGGGTTACTTCAACGTCATTCCTCGGCACGCTTTCCT
TCTCGACATCTGCAATTACGTCCGAACGCTTCCAATCCTCATCACGGCTT
GCTGCGCTCGTAAAGACGGTGACGACCCCTTCTCCCACTTCTCCTCAACA
GCCCAGAACTCAAAGCTGCCTTGGTCAGTTTGGGCAAAGGACAAGCTCAT
CGGATGGCGAGGCTCCTATCTCGAACCTGCACTAGCGGCGATCGGATTGT
TACGGAAGCGGTCAAACGTTGTCGAGAGTGCAGCTGTTATGGAAGCAAGT
GAGGGCGGGCGAGATGCCGCAGGAGTCGGAGTTTCAGAGGGAGGAACAGT
AGGCACGAATTTCAAGACAGCCAAGACAAGCACAGCTGCAACGACACCGA
AGGCTTCGTCCCACTACTCGTCATCTCGTGGTAGAGTTTCAGAGTTTCAG
GGTCCTATTAGAAGCATGGACAGCATCAGCATCAGCAGCAACTTTAGGAT
ACCCCACGACCGCAGCCATCAGCACCACCATCTCCACCACTCCACTCGGA
AGCATCGCTCTACGAAAGGAGCGAACGGAAGTCAGAAGTTTTTCAGCCGT
CTCAGACAGCCGGTCAAAGTAGCCTTGGCAATTTGTCTTGCCAGCCTCAT
GGTGCTCTACGACGTAGGACCCAGTACGACTTGGGGAGTGATTGCGGTGT
GTCAAGCCATGTCATCTCATCCTGGCTCGAGTTTCAAGCAAGGCTATGAT
CGTATACAAGGCACCGTATTGGGCGGAATGTTCGGCATCGTCATCTTGGA
CTGGTTTAATTGGACCAGCAAGCTTGCCATTCTTTGCTCCCTCACCGTTT
GGGTCTTCCTCTGCTCCCTCAGCCAGAGGTCGTCTTCGCATGGACAAGTG
GCTGTGGTGGCGGCTGCCACAGCGCCAATGATTATGATCGGACCCATGGC
GGGTGGGAAAGGTGCCATGATTCGTATCCCGCAAACCGTCTTGGGTTCAC
TGCTTTATGTCGTTATTGATAACACCTTCTGGCCAGTCCGCGCCAAGCTT
GACCTGCGCCGGGAGCTCCTTGCCTCTCTACTACACTTCCGCGAATTGTG
GGGGCTTACTTTTTCCATATTTTTGCAGAAGGCTCCAGACCCCGTTGAAG
CTATGGCGAACGCCCAGATTCTGCATGATACATTGACCTCCTCCTTTTCT
CTCCAAAAGAAATATATCTCCTTGGCTTTTGATGAGCCGGAGTTGTTTCA
TAAGCCTTTTCACGTGGGCGTTTACCAGACGGTAGTGGAATCTTTATCGA
AGGTTTCCTTGTTTATGGCCATGTTGGTCCGATCTTCCATAGCATTCCCC
CTCGAAGTCGAAGAGCGGGACCGTGCCATGCTAAGCAGCATTCAAGGTGC
CGTACATGAGCTGAACCAAGCGACGACATCGGCTCTGGAGGAAGCGTACG
AGGCCGTTAAGGGCATGACGGACCGGAAATGGAAGGACGAGTATGAAGAC
AGGACAGGAACGACGACAGATGCTGCAGCAAGTCCACACGAAGGACGAAG
GCTGGCTGGAGGGAGAGGGTTGAGGAATCATCATCACAACTACCACCGGC
GCAAGCGGACCACGGCTACACCTGTCCTGTCGACCGAGGCTGCCCAAGCC
GTTGCCCTGCTCCGTCTGAGACAAGCATACGTCAAGATCCAGGACTGGGT
GGACGTATATTTCGAGGAGCATATCAGGGAAAACTGGACGAAGGACGACC
TTGTCTTTGTATCGGCGGACTTGATATTGTCTTTGTGTGGGATGATCTTT
GCCGTCGAAGGTCTGGGCAAGGGATTGCTCGGGTTGGGGCATGCCATCCG
AGAGCTCGTGGAGCGTGAGAAGGGGAATTATTATCGATTGTAAAATTGAT
TGACTCCAATGGCGATGAAGTTGTATTTGTCTCATACCAATAGAATAGAT
ACTTGTATTTACGTTTAGTTTTGCTAGGGTGGGTGTGGTGTCTTTATCGA
TCGACTTTGTGATATCCCACCAGAATG
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protein sequence of NO23G00360.1

>NO23G00360.1-protein ID=NO23G00360.1-protein|Name=NO23G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1416bp
MDSDAERGTDEAGAPSYSSSNGPSLPLHVLSPALLDHVGPPSRHCSQWKS
SEMTRQDGQSDTGNYYRRRSTSASNDTSTHNTSRFRRSSCASTAGGSDAD
DDDENWSNIYVDDDSDDSDCDSIGNPCMSRRFSAVMPHRVWASPLKTSTA
GRTSNTNAGNFIHGDAPFSQMTLAALIETQAEGEQGSMQYKPSGFRSHSE
SHQHNNQASFSTASTPWRQRESSLEDPSGSVSTASRDTHSQKPTRPPRKH
GCKRGPAYLHFRSKIEMAIRTASAAGFSTGIMLFVWSWAHSLSWFGVTLA
ISGTRKSLGETFMAAFDFWKGGLLVLPWIYALNVVRSHAILTLLGLFVSL
IFIIWFPGVSDSGKSMATIFLTVVVLTGDKDPVVHYNSLVRDLYMTMIIA
NAFSVMALLLPLPLPSLALFDVRLKVKIIRHRLGSILRGYDHTFDLGQEV
HYSMIEQLLEEISRALVEIRAQLPQVKWEMVVLRFKQYSHAHLVAYVETV
EKQLELFKGMRLSLRRMSNNATHQEFLKYLQEPLSHLLEACVAVSDTATR
QIESELVVGAWLRKYVKQRRQNQRLDKQRSREIRAEPHQSTVKEGGASMR
QHRRQQTMSRAVKYQLQSRRHSYDLDSLFTIVESRAEVLMKEFVKARLAI
LCGFKAVSEDGMGDPLSYNLRSSTKPATTIDMNPTSVTNTIPVTILSQSD
SGSTKNKLVTSSSAIRRPSEDSNEGGDADSRKGDSEETAPHQLAPAQEDT
MHPKPQQPQKVHWTVDGLELQRHQSGQAVYNAFAAEYSKLGYFNVIPRHA
FLLDICNYVRTLPILITACCARKDGDDPFSHFSSTAQNSKLPWSVWAKDK
LIGWRGSYLEPALAAIGLLRKRSNVVESAAVMEASEGGRDAAGVGVSEGG
TVGTNFKTAKTSTAATTPKASSHYSSSRGRVSEFQGPIRSMDSISISSNF
RIPHDRSHQHHHLHHSTRKHRSTKGANGSQKFFSRLRQPVKVALAICLAS
LMVLYDVGPSTTWGVIAVCQAMSSHPGSSFKQGYDRIQGTVLGGMFGIVI
LDWFNWTSKLAILCSLTVWVFLCSLSQRSSSHGQVAVVAAATAPMIMIGP
MAGGKGAMIRIPQTVLGSLLYVVIDNTFWPVRAKLDLRRELLASLLHFRE
LWGLTFSIFLQKAPDPVEAMANAQILHDTLTSSFSLQKKYISLAFDEPEL
FHKPFHVGVYQTVVESLSKVSLFMAMLVRSSIAFPLEVEERDRAMLSSIQ
GAVHELNQATTSALEEAYEAVKGMTDRKWKDEYEDRTGTTTDAAASPHEG
RRLAGGRGLRNHHHNYHRRKRTTATPVLSTEAAQAVALLRLRQAYVKIQD
WVDVYFEEHIRENWTKDDLVFVSADLILSLCGMIFAVEGLGKGLLGLGHA
IRELVEREKGNYYRL*
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Synonyms
Publications