NO23G00320, NO23G00320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO23G00320 vs. NCBI_GenBank
Match: XP_008906950.1 (hypothetical protein PPTG_13005 [Phytophthora parasitica INRA-310] >ETK84319.1 hypothetical protein L915_10707 [Phytophthora parasitica] >ETL37757.1 hypothetical protein L916_10599 [Phytophthora parasitica] >ETL90903.1 hypothetical protein L917_10502 [Phytophthora parasitica] >ETN07665.1 hypothetical protein PPTG_13005 [Phytophthora parasitica INRA-310] >ETO72963.1 hypothetical protein F444_11056 [Phytophthora parasitica P1976] >ETP14137.1 hypothetical protein F441_10905 [Phytophthora parasitica CJ01A1] >ETP42193.1 hypothetical protein F442_10880 [Phytophthora parasitica P10297] >KUF88207.1 hypothetical protein AM588_10003634 [Phytophthora nicotianae]) HSP 1 Score: 349.4 bits (895), Expect = 8.700e-93 Identity = 169/229 (73.80%), Postives = 198/229 (86.46%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNSELL+Q V+D+LA+S G+T+T +GEE+KGK RNFNETIELQIALKNYDPQ+DKRFSG FKLP VP+PNM + VLGNA+HCE AEK G + TVDD+KK+NKNKK+IKKF KKY+AFLASD+LIKQIPRLLGP L KAGKFPT + D L EK + V+ATIKFQMKKVMC++VAIGHV + K +I +N QLA+NFLASLLKKNWQNIKVLY+KSTMGP QI+F Sbjct: 1 MSKLNSELLSQAVDDILAFSAGETVTINGEEIKGKKRNFNETIELQIALKNYDPQKDKRFSGTFKLPTVPRPNMKICVLGNAVHCEMAEKEGFEYMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVTSNDSLTEKAEAVRATIKFQMKKVMCLNVAIGHVALEKQQIVVNTQLAANFLASLLKKNWQNIKVLYLKSTMGPAIQIFF 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: ETI44310.1 (hypothetical protein F443_10986 [Phytophthora parasitica P1569] >ETM44203.1 hypothetical protein L914_10541 [Phytophthora parasitica]) HSP 1 Score: 347.8 bits (891), Expect = 2.500e-92 Identity = 168/229 (73.36%), Postives = 198/229 (86.46%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNSELL+Q V+D+LA+S G+T+T +GEE++GK RNFNETIELQIALKNYDPQ+DKRFSG FKLP VP+PNM + VLGNA+HCE AEK G + TVDD+KK+NKNKK+IKKF KKY+AFLASD+LIKQIPRLLGP L KAGKFPT + D L EK + V+ATIKFQMKKVMC++VAIGHV + K +I +N QLA+NFLASLLKKNWQNIKVLY+KSTMGP QI+F Sbjct: 1 MSKLNSELLSQAVDDILAFSAGETVTINGEEIEGKKRNFNETIELQIALKNYDPQKDKRFSGTFKLPTVPRPNMKICVLGNAVHCEMAEKEGFEYMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVTSNDSLTEKAEAVRATIKFQMKKVMCLNVAIGHVALEKQQIVVNTQLAANFLASLLKKNWQNIKVLYLKSTMGPAIQIFF 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: XP_024576077.1 (60s ribosomal protein l10a [Plasmopara halstedii] >CEG39708.1 60s ribosomal protein l10a [Plasmopara halstedii]) HSP 1 Score: 342.4 bits (877), Expect = 1.100e-90 Identity = 166/229 (72.49%), Postives = 196/229 (85.59%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNS+LL+Q V+D+LA+S G+T+T +G E+KGK RNFNETIELQIALKNYDPQ+DKRFSG FKLP VP+P M + VLGNA+HCE AEK G + TVDD+KK+NKNKK+IKKF KKY+AFLASD+LIKQIPRLLGP L KAGKFPT + D L EK + V+ATIKFQMKKVMC++VAIGHV + K +I +N QLA+NFLASLLKKNWQNIKVLY+KSTMGP QI+F Sbjct: 1 MSKLNSDLLSQAVDDILAFSAGETVTINGNELKGKKRNFNETIELQIALKNYDPQKDKRFSGTFKLPTVPRPGMKICVLGNAVHCEMAEKEGFEYMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVTSSDSLTEKAEAVRATIKFQMKKVMCLNVAIGHVGLDKQQIVVNTQLAANFLASLLKKNWQNIKVLYLKSTMGPAVQIFF 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: GAY00644.1 (60S ribosomal protein L10A putative [Pythium insidiosum]) HSP 1 Score: 342.4 bits (877), Expect = 1.100e-90 Identity = 168/229 (73.36%), Postives = 199/229 (86.90%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNSE+LA+ V+D+LA+S G+TIT +G++VKGK RNFNETIELQIALKNYDPQ+DKRFSG FKLP VP+PNM + VLGNA+HCE AEK G + TVDD+KK+NKNKK IKKF KKY+AFLASD+LIKQIPRLLGP L KAGKFPT + + L +K D V+ATIKFQMKKVMC++VAIGHV ++KD+I +N QLA+NFLASLLKKNWQNIKVLY+KSTMGP QIY+ Sbjct: 1 MSKLNSEILAKAVDDVLAFSAGETITVNGKDVKGKKRNFNETIELQIALKNYDPQKDKRFSGTFKLPTVPRPNMKICVLGNAVHCELAEKEGFEYMTVDDLKKFNKNKKQIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVGSNEGLTDKADQVRATIKFQMKKVMCLNVAIGHVGLTKDQIVVNTQLAANFLASLLKKNWQNIKVLYLKSTMGPPQQIYY 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: CCA20514.1 (60S ribosomal protein L10A putative [Albugo laibachii Nc14]) HSP 1 Score: 340.5 bits (872), Expect = 4.100e-90 Identity = 166/229 (72.49%), Postives = 196/229 (85.59%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNSE+L + V ++LAYS G+TIT +G+EVKGK RNF ETIELQIALKNYDPQ+DKRFSG FKLP VP+PNM + VLGNA+HCE+AEK G + TVDD+KK+NKNKK+IKKF KKY+AFLASD+LIKQIPRLLGP L KAGKFPT + + L EK D ++ATIKFQMKKVMC++VAIGHV +S EI +N QLA+NFLASLLKKNWQNIKV+Y+KSTMGP QIY+ Sbjct: 1 MSKLNSEILEKAVNEILAYSSGETITVNGKEVKGKQRNFKETIELQIALKNYDPQKDKRFSGTFKLPTVPRPNMKICVLGNAVHCEQAEKDGFEFMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVGSSESLTEKADQLRATIKFQMKKVMCLNVAIGHVGLSTQEIVVNTQLAANFLASLLKKNWQNIKVMYLKSTMGPVQQIYY 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: OQS01489.1 (60S ribosomal protein L10a-1 [Achlya hypogyna]) HSP 1 Score: 339.0 bits (868), Expect = 1.200e-89 Identity = 166/229 (72.49%), Postives = 198/229 (86.46%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNSELLA+ V D+LAYS G+TIT EEVKGK RNF+ETIELQIALKNYDP +DKRFSG FKLP VPKPN+ + ++GNA+HCE AEK G + TVDD+KK+NKNKK+IKKF KKY+AFLASD+LIKQIPRLLGPSL KAGKFPT I G+ + EK + V+ATIKFQMKKV+C+++A+GHV ++K+EI +N QLA+NFLASLLKKNWQNIKVLY+KSTMGP QIY+ Sbjct: 1 MSKLNSELLAKSVADILAYSAGETITVGKEEVKGKKRNFHETIELQIALKNYDPTKDKRFSGTFKLPTVPKPNLKICIIGNAVHCELAEKNGFEFMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPSLNKAGKFPTLITTGEDINEKANAVRATIKFQMKKVLCLNLAVGHVGLTKEEIIVNTQLAANFLASLLKKNWQNIKVLYLKSTMGPAMQIYY 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: XP_008876001.1 (hypothetical protein H310_11200 [Aphanomyces invadans] >ETV95300.1 hypothetical protein H310_11200 [Aphanomyces invadans]) HSP 1 Score: 338.2 bits (866), Expect = 2.000e-89 Identity = 164/229 (71.62%), Postives = 200/229 (87.34%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNS+LL + V+D+LA+S+G+TIT EEVKGK RNF+ETIELQIALKNYDPQ+DKRFSG FKLP VPKPN+ + V+GNA HCE AEK G + TVDD+KK+NKNKK+IKK+ KKY+AFLASDSLIKQIPRLLGP+LTKAGKFPT ++G + + +K + V+ATIKFQMKKVMC+++A+ HV +K+EI +N QLA+NFLASLLKKNWQNIKVLY+KSTMGP FQIY+ Sbjct: 1 MSKLNSDLLDKAVQDILAFSKGETITVGKEEVKGKKRNFHETIELQIALKNYDPQKDKRFSGTFKLPTVPKPNLKICVIGNAQHCELAEKNGFEFSTVDDLKKFNKNKKVIKKYAKKYDAFLASDSLIKQIPRLLGPALTKAGKFPTLLSGNEDINDKANAVRATIKFQMKKVMCLNLAVAHVGQTKEEIVVNTQLAANFLASLLKKNWQNIKVLYLKSTMGPAFQIYY 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: CCI49020.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 338.2 bits (866), Expect = 2.000e-89 Identity = 165/229 (72.05%), Postives = 196/229 (85.59%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKL+SE+L + V ++LAYS G+TIT +G+EVKGK RNF ETIELQIALKNYDPQ+DKRFSG FKLP VP+PNM + VLGNA+HCE AEK G D TVDD+KK+NKNKK+IKKF KKY+AFLASD+LIKQIPRLLGP L KAGKFPT + + L EK D ++ATIKFQMKKVMC+++AIGHV +S +EI +N QLA+NFLASLLKKNWQNIKV+Y+KSTMGP QIY+ Sbjct: 1 MSKLSSEILDKAVNEILAYSSGETITINGKEVKGKQRNFKETIELQIALKNYDPQKDKRFSGTFKLPTVPRPNMKICVLGNAVHCEVAEKNGFDFMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVGSSESLTEKADQLRATIKFQMKKVMCLNIAIGHVGLSTEEIVVNTQLAANFLASLLKKNWQNIKVMYLKSTMGPVQQIYY 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: XP_009834263.1 (hypothetical protein H257_09667 [Aphanomyces astaci] >ETV76138.1 hypothetical protein H257_09667 [Aphanomyces astaci]) HSP 1 Score: 337.4 bits (864), Expect = 3.400e-89 Identity = 164/229 (71.62%), Postives = 200/229 (87.34%), Query Frame = 0 Query: 1 MSKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 MSKLNS+LL + V+D+LA+S G+TIT EEVKGK RNF+ETIELQIALKNYDPQ+DKRFSG FKLP VPKPN+ + V+GNA+HCE AEK G + TVDD+KK+NKNKKIIKK+ KKY+AFLASDSLIKQIPRLLGP+LTKAGKFPT ++G + + +K + V+ATIKFQMKKVMC+++A+ HV +K+EI +N QLA+NFLASLLKKNWQNIKVLY+KS+MGP FQIY+ Sbjct: 1 MSKLNSDLLDKAVQDILAFSAGETITVGKEEVKGKKRNFHETIELQIALKNYDPQKDKRFSGTFKLPTVPKPNLKICVIGNAVHCELAEKNGFEFSTVDDLKKFNKNKKIIKKYAKKYDAFLASDSLIKQIPRLLGPALTKAGKFPTLLSGNEDINDKANAVRATIKFQMKKVMCLNLAVAHVGQTKEEIVVNTQLAANFLASLLKKNWQNIKVLYLKSSMGPSFQIYY 229
BLAST of NO23G00320 vs. NCBI_GenBank
Match: CBN78308.1 (60S ribosomal protein L10A [Ectocarpus siliculosus]) HSP 1 Score: 332.8 bits (852), Expect = 8.400e-88 Identity = 160/228 (70.18%), Postives = 195/228 (85.53%), Query Frame = 0 Query: 2 SKLNSELLAQCVEDLLAYSQGKTITKDGEEVKGKIRNFNETIELQIALKNYDPQRDKRFSGVFKLPVVPKPNMTLAVLGNALHCEEAEKIGVDKYTVDDMKKWNKNKKIIKKFTKKYNAFLASDSLIKQIPRLLGPSLTKAGKFPTTIAGGDKLLEKIDTVKATIKFQMKKVMCMSVAIGHVKMSKDEIALNVQLASNFLASLLKKNWQNIKVLYIKSTMGPRFQIYF 230 SKLNSEL+ + V+D+LA+S G+TI K E+ GK R F E+IELQ+ LKNYDPQRDKRFSG FKLP +P+P M L +LGNA+HCE+AE+IG+D+ +V+D+KK+NKNK +IKKF KKY+AFLASDSLIKQIPRLLGP LTKAGKFPT + GD L K+DTV+ATIKFQMKKVMC+SVA+ +V+ K+EI LNVQLA+NFLASLLKKNWQNIKV+Y+KSTMGP QI+F Sbjct: 3 SKLNSELVTKAVDDILAFSAGETIKKGETEIVGKKRKFTESIELQVTLKNYDPQRDKRFSGTFKLPTIPRPRMKLCMLGNAVHCEQAEQIGLDRMSVEDLKKFNKNKNLIKKFAKKYDAFLASDSLIKQIPRLLGPGLTKAGKFPTLVNAGDNLQSKVDTVRATIKFQMKKVMCLSVAVANVEQPKNEIELNVQLAANFLASLLKKNWQNIKVMYVKSTMGPVHQIFF 230 The following BLAST results are available for this feature:
BLAST of NO23G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00320 ID=NO23G00320|Name=NO23G00320|organism=Nannochloropsis oceanica|type=gene|length=3974bpback to top protein sequence of NO23G00320.1 >NO23G00320.1-protein ID=NO23G00320.1-protein|Name=NO23G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=230bpback to top Synonyms
Publications
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