NO23G00310, NO23G00310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO23G00310 vs. NCBI_GenBank
Match: OEU13080.1 (hypothetical protein FRACYDRAFT_270351 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.1 bits (183), Expect = 3.500e-10 Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 0 Query: 151 FVPEHLHKVVIYKTKGIKPLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQL--ERKPRYKALPADSTDLLACVTCAGLGHHPRHCPQ 253 +VP ++HK V Y +G LS + V+ F+ EHY++P + ES+ GPLSG FE R + AY L Y++ +TD+ C CA LGH CP+ Sbjct: 111 YVPIYIHKNVNYLRRGEATLSETIQKVFDFIEEHYVIPSNFESDRSMGPLSGTCFEVRVVEAYERGLLLSANSTEYQS----TTDITICSHCADLGHVGDDCPK 210
BLAST of NO23G00310 vs. NCBI_GenBank
Match: GAX12254.1 (hypothetical protein FisN_1Hu185 [Fistulifera solaris]) HSP 1 Score: 74.7 bits (182), Expect = 4.600e-10 Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 0 Query: 149 AKFVPEHLHKVVIYKTKGIKPLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHCP 252 ++FVP+++HK V Y +G L VY ++RE Y +P D E +GPLSG S+E+R I Y +L+RK + P D T L C CA GH CP Sbjct: 82 SQFVPKYIHKNVEYCREGSSTLPSKTIQVYQWIRERYKIPSDFEQQRFFGPLSGTSYEQRVITEYKLGKLDRK---EDAPDDET--LICSGCAQTGHLRDDCP 179
BLAST of NO23G00310 vs. NCBI_GenBank
Match: XP_002286944.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96585.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 73.6 bits (179), Expect = 1.000e-9 Identity = 34/100 (34.00%), Postives = 53/100 (53.00%), Query Frame = 0 Query: 151 FVPEHLHKVVIYKTKGIKPLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHC 251 + P H++ V + +G L +G+ Y F+R HY++P E++ ++GP SG FEER I +Y +LE K Y+ + D + L C C GH C Sbjct: 103 YKPTHIYANVGFHCRGDLALDKGKLKAYRFIRNHYLIPLTFETDRQFGPHSGSCFEERVITSYSLGKLELKDEYRGV-VDESSLFVCSHCGDEGHKRDGC 201
BLAST of NO23G00310 vs. NCBI_GenBank
Match: XP_008909310.1 (hypothetical protein PPTG_14095 [Phytophthora parasitica INRA-310] >ETI40808.1 hypothetical protein F443_13886 [Phytophthora parasitica P1569] >ETK80917.1 hypothetical protein L915_13526 [Phytophthora parasitica] >ETL34334.1 hypothetical protein L916_13424 [Phytophthora parasitica] >ETL87613.1 hypothetical protein L917_13232 [Phytophthora parasitica] >ETM40840.1 hypothetical protein L914_13323 [Phytophthora parasitica] >ETN05335.1 hypothetical protein PPTG_14095 [Phytophthora parasitica INRA-310] >ETO69511.1 hypothetical protein F444_13918 [Phytophthora parasitica P1976] >ETP10551.1 hypothetical protein F441_13819 [Phytophthora parasitica CJ01A1] >ETP38751.1 hypothetical protein F442_13718 [Phytophthora parasitica P10297]) HSP 1 Score: 70.1 bits (170), Expect = 1.100e-8 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 0 Query: 152 VPEHLHKVVIYKTKGIK-PLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHCPQG 254 +P ++K V YK K K +S+ + + +++++Y +P DLE+N K+G SG ++E+R AY DQL K K A C+TCA +GH + CP G Sbjct: 52 IPTFIYKTVKYKHKHKKHEVSKEMKTIVEYIKKYYDVPKDLETNVKFGCHSGLTYEKRLARAYSMDQLSLKHGKKNGAAPKP---ICLTCASVGHTHKTCPDG 151
BLAST of NO23G00310 vs. NCBI_GenBank
Match: XP_024577628.1 (hypothetical protein PHYSODRAFT_523199 [Plasmopara halstedii] >CEG41259.1 hypothetical protein PHYSODRAFT_523199 [Plasmopara halstedii]) HSP 1 Score: 67.8 bits (164), Expect = 5.600e-8 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 0 Query: 152 VPEHLHKVVIYKTKGIK-PLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYK--ALPADSTDLLACVTCAGLGHHPRHCPQG 254 +P +++ V YK K K S+ + + ++++HY +P D E N+K+G SG +FE+R AY+ QL+ K K A+P C+TCA +GH + CP G Sbjct: 31 IPVFIYEFVKYKAKHEKHETSKKLKTIVEYIKKHYDVPKDFEVNAKFGCHSGLTFEKRLTRAYLMGQLDLKHEKKGGAMPKP-----ICLTCATVGHTYKTCPDG 130
BLAST of NO23G00310 vs. NCBI_GenBank
Match: XP_002181689.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46903.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 66.6 bits (161), Expect = 1.300e-7 Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0 Query: 150 KFVPEHLHKVVIYKTKG-IKPLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHCP 252 ++VP +LH+ + Y+ +G K L R + ++Y +P +LE + KYGPLSG ++EE + AY L K A+ ++ D+ C CA LGH CP Sbjct: 87 EYVPRYLHQTLDYQRRGQKKDLPTHTRTALALIEQYYEIPANLEQSRKYGPLSGTTYEELVLQAYTLGTLAVKKEDGAIVSE-VDI--CTECAVLGHRRGECP 186
BLAST of NO23G00310 vs. NCBI_GenBank
Match: ETI40809.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK80918.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL34335.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL87614.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM40841.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO69512.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP10552.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP38752.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 65.1 bits (157), Expect = 3.600e-7 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0 Query: 152 VPEHLHKVVIYKTKGIK-PLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHCPQG 254 +P ++K V YK K K +S+ + + +++ +Y +P DLE+N K+G SG ++E+R AY DQL K K A C+TCA +GH + CP G Sbjct: 52 IPTFIYKTVKYKHKHKKHEVSKEMKTIVEYIK-YYDVPKDLETNVKFGCHSGLTYEKRLARAYSMDQLSLKHGKKNGAAPKP---ICLTCASVGHTHKTCPDG 150
BLAST of NO23G00310 vs. NCBI_GenBank
Match: XP_009534518.1 (hypothetical protein PHYSODRAFT_523199 [Phytophthora sojae] >EGZ09657.1 hypothetical protein PHYSODRAFT_523199 [Phytophthora sojae]) HSP 1 Score: 64.3 bits (155), Expect = 6.200e-7 Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 0 Query: 152 VPEHLHKVVIYKTKGIK-PLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHCPQG 254 +P +++ V YK K K +S V +++++Y +P D E N+K+G SG ++ +R AY QL K KA+ ++ C+TCA +GH + CP G Sbjct: 31 IPTFIYETVKYKHKHQKHEVSPELNDVILYIKQYYDVPKDFERNAKFGAYSGLTYGKRLARAYSMGQLSLK---KAVKGEAAPQPICLTCATVGHTYKCCPDG 130
BLAST of NO23G00310 vs. NCBI_GenBank
Match: EJK47483.1 (hypothetical protein THAOC_33790 [Thalassiosira oceanica]) HSP 1 Score: 64.3 bits (155), Expect = 6.200e-7 Identity = 34/100 (34.00%), Postives = 52/100 (52.00%), Query Frame = 0 Query: 153 PEHLHKVVIYKTKGIKPLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHCPQ 253 P ++++ + Y ++G K L G Y FVR+++++P D+E + ++G SG SFEER + AY LE K D T L C C H CP+ Sbjct: 115 PAYINRCLQYCSRGSKALPVGTLAAYRFVRDNFLVPRDIE-DPRFGAYSGTSFEERVLRAYSLGMLETKG-----DVDKTTLKVCTYCGCERHVRDECPE 208
BLAST of NO23G00310 vs. NCBI_GenBank
Match: EJK59705.1 (hypothetical protein THAOC_20038 [Thalassiosira oceanica]) HSP 1 Score: 64.3 bits (155), Expect = 6.200e-7 Identity = 34/100 (34.00%), Postives = 52/100 (52.00%), Query Frame = 0 Query: 153 PEHLHKVVIYKTKGIKPLSRGQRFVYTFVREHYILPHDLESNSKYGPLSGRSFEERAIAAYMHDQLERKPRYKALPADSTDLLACVTCAGLGHHPRHCPQ 253 P ++++ + Y ++G K L G Y FVR+++++P D+E + ++G SG SFEER + AY LE K D T L C C H CP+ Sbjct: 116 PAYINRCLQYCSRGSKALPVGTLAAYRFVRDNFLVPRDIE-DPRFGAYSGTSFEERVLRAYSLGMLETKG-----DVDKTTLKVCTYCGCERHVRDECPE 209 The following BLAST results are available for this feature:
BLAST of NO23G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO23G00310 ID=NO23G00310|Name=NO23G00310|organism=Nannochloropsis oceanica|type=gene|length=2326bpback to top protein sequence of NO23G00310.1 >NO23G00310.1-protein ID=NO23G00310.1-protein|Name=NO23G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top Synonyms
Publications
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