NO23G00280, NO23G00280 (gene) Nannochloropsis oceanica

Overview
NameNO23G00280
Unique NameNO23G00280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7610
Alignment locationchr23:119800..127409 -

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:119800..127409 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO23G00280 vs. NCBI_GenBank
Match: EWM25463.1 (START-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 184.5 bits (467), Expect = 1.100e-42
Identity = 103/329 (31.31%), Postives = 173/329 (52.58%), Query Frame = 0
Query:   94 FPSYNVDIEKARTMQVTETNYREAADMALLLGKDSRYLLAFNLLQQLDTLSPSLPL------LHSLLHEGKDKGSWELIRARGEACQDALKVEDGDGGWIFVQSLLGMDTYYKYEEGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPFLTRDCVVRGYACDAMEDATILLVADSTEDLGSDTP---IPPKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLVNFATKQLVGVLMYLLQEASRKV--AADPVKNHHAKKIREESDFYRHWLLPRARLYSKLRGWTF 412
            FPS + D+      ++T+ N         LL +D R ++A +L ++L+      PL      +   + E   +    L+  RG  C +A +       W       G DT+ +    Q+Y KVEG+ +  S+ DQL ++RE  +++RW PFV  SA++     F   D+ + F L+ P   RDC++RGYACD  E   IL+  DS   + +D P   +  +P GW+  RM I  FR ++     N G+V+++A++DP+T LP +++NF  +++VGVL+YLL   ++++  A D +     + IR +  ++RH  LPR   Y + +GW +
Sbjct:   60 FPSRDFDVPALYKTEITDENASRILAYIQLLTEDDRLMIAEDLRKKLEAFVKEQPLSQVKENIRRQMQESPLQEQLALLSRRGVECLEAAEDLASRENWTLAFRTFGFDTFVRPVGEQMYVKVEGEQEGTSIFDQLLVVREAAMYHRWGPFVCSSALVH---SFKQLDLMVTFELNAPLFHRDCLMRGYACDYSEKDMILICGDSV--VPADYPSLGLSTEPNGWLFKRMSITRFRCQVQLRGVNKGKVIMAALIDPRTALPQSVINFCLQRIVGVLLYLLLRTAQRLNQAGDKLGADFLQVIRRDPYYFRH-CLPRILWYCQQKGWEY 382          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: CBJ32035.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 183.3 bits (464), Expect = 2.500e-42
Identity = 105/312 (33.65%), Postives = 175/312 (56.09%), Query Frame = 0
Query:  109 VTETNYREAADMALLLGKDSRYLLAFNLLQQLDTLSPS--------LPLLHSLLHEGKDKGSWELIRARGEACQDALKVEDGDGGWIFVQSLLGMDTYYKYE-EGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPFLTRDCVVRGYACDA-MEDATILLVADSTEDLGSDTPIPPKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLVNFATKQLVGVLMYLLQEASRKVAADPVKNHHAKKIREESDFYRHWLLPRARLYSKLRGWT 411
            V+  N  E      L  + +R L+A  LL  +D    S        +   H+LL  G+ K  ++ +R R   CQ +L  +     W+  Q+ +G+ T+YK + +G L+ K+ G   D +V+DQLA++RE DL+N+W PF + S +LKR G     ++ ++F++S+P + RDCV+  Y CD+ +E   IL+   S E++     + P+  GW   RMD++ FR KI   SP S R  + A +DPK  +P ++VNF  +++ G+ +Y L++ ++ + AD   N H ++I E+  FY+ WL PR   + + +GWT
Sbjct:   12 VSFRNVLELIAEVQLCREQARLLVAGRLLAAVDRYLASGQHAGRQEVKEAHALL-AGELKPLFDEVRQRAAECQSSLD-DWQSPDWLVAQTFMGITTFYKVDPDGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLG---IVELLVYFSMSIPGVGRDCVLHAYGCDSVLETGCILIQGRSVEEVPEGVEV-PQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAPVPQSVVNFVVRKMAGMFLYCLKQTAKCIRADE-GNCHRRRIVEDKAFYKGWLFPRFERFYRRQGWT 316          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: EJK43974.1 (hypothetical protein THAOC_37531, partial [Thalassiosira oceanica])

HSP 1 Score: 157.9 bits (398), Expect = 1.100e-34
Identity = 107/339 (31.56%), Postives = 161/339 (47.49%), Query Frame = 0
Query:  147 LPLLHSLLHEGKDKGSWELIRARGE---ACQDALKVED-GDG-------GWIFVQSLLGMDTYYKYE-EGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPF--LTRDCVVRGYACDAM-EDATILLVADSTED-----------LGSDT----------------------------------------PIPPKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTL-PPTLVNFATKQLVGVLMYLLQEASRKVAADPVKNHHAKKIREESDFYRHWLLPRARLYSKLRGWTFMPMVALE 419
            L L   LL E  D+  + L+R R     A ++ L   D  DG       GW+  Q+L G+ T+Y+ E +G L  ++ GD     + +QLAI+RE DL++ WAPF   S  L + G     D+A  +++ +P   L+RD   R   CD M ED ++++VA    D           LG  T                                         +PP P+G    RM I+NF  K+    P S R ++   +DP   L P  L++F+ K++ G+L+  LQ ++R+V  DPV N HA+++RE+  FYR WLLP+ R Y + +GW   P+ A E
Sbjct:   69 LKLARDLLDEKSDE--FALLRRRASLFLAAKETLSQHDKNDGEESDENTGWVHAQTLFGVSTHYRRESDGSLSIRIAGDLVGVPLFEQLAILREVDLYHAWAPFCVSSRKLAQLG---RLDVAAWYDVGVPIFGLSRDACYRAVGCDGMAEDGSVMIVAVGLNDTDEHGVVSSASLGKQTRKRGPSXXXXXXXXXXAEGLEATEGSLLSSLARDEILSTLEMPPVPSGAGRGRMTIRNFSAKVDVLGPTSARTIMVVNVDPNLQLIPQALIDFSMKKMCGILLSRLQASARRVLKDPVGNAHARRMREDVTFYRDWLLPKFRAYCEAKGWNMPPVGAFE 402          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: GAX11088.1 (hypothetical protein FisN_9Hh178 [Fistulifera solaris])

HSP 1 Score: 150.6 bits (379), Expect = 1.800e-32
Identity = 92/263 (34.98%), Postives = 137/263 (52.09%), Query Frame = 0
Query:  176 ALKVEDGDGGWIFVQSLLGMDTYYKYEE-GQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMP--FLTRDCVVRGYACDAM-EDATILLVADSTEDL--GSDTP---------------IPPKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTT-LPPTLVNFATKQLVGVLMYLLQEASRKVAADPVKNHHAKKIREESDFYRHWLLPRARLYSKLRGWTFMPMVA 417
            ALK  + D  W F     G+ TYY+ EE G L  K+EG+     + +Q+A++R GDL  +W PF + S ++ + G     D+   F + +P   L RD   R   CD M ED +I++      D+  G   P               IPP PT     RM I+ F T +  TSP S +  + A L+P    L   +++FA K L GV++  LQ A++KV  +PV NHHA+++REE DFY+ WL+ + + +   +GW  MP V+
Sbjct:  120 ALKNLNTDEDWTFASLHFGITTYYRREEDGSLSVKLEGELTGVPLFEQIAVLRAGDLHYKWVPFCSSSMIIAQLG---KLDIINWFMIGIPQFGLARDGCYRAIGCDNMSEDGSIIIAGQGINDIMPGDHPPEDPFLSNDPAVFALNIPPAPTKRGNGRMTIRKFETVVNITSPTSAKTRIVANLNPNIAFLSQGIIDFALKHLAGVVLAKLQSAAKKVVKNPVTNHHAQQMREEPDFYQTWLMAKFKAFCDEKGWE-MPRVS 378          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: EWM27447.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 142.1 bits (357), Expect = 6.500e-30
Identity = 97/343 (28.28%), Postives = 174/343 (50.73%), Query Frame = 0
Query:   91 DDRFPSYNVDI--EKARTMQVTETNYREAADMALLLGKDSRYLLAFNLLQQLDTLS-----PSLPLLHSLLHEGKDKGSWELIRARGEACQDALKVEDGDGGWIFVQSLLGMDTYYKYEEGQ--LYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLS---MPFLTRDCVVRGYACDAMEDATILLVADS--TEDLGSDTPIPPKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTT-LPPTLVNFATKQLVGVLMYLLQEASRKVAADPVKNHHAKKIREESDFYRHWLLPRARLYSKLRGWTFMPMVALE 419
            D  +  Y +++   + + +QV E N + A  +  LL  D+R  LA +LLQ+++  +     P       ++   +D    E +R R + C+ A +    +  W    +  G+ T+ + +EG   L  +  G+ +DC V+ QLA++RE D ++ W P ++KS V+KR G     +  L F ++   +PF+ RD V+  Y CDA E+  I+L   S   +++     + P    W   R+DIK F  ++   SP   ++ L   LD K   +P  ++N+ +K L G +++ L +  R++  DPV++  A+ +R E  FY ++L+P     +  +GW   P+ A E
Sbjct:   29 DGSYRGYTMEVAANETQALQVGEENVQVAYRLVQLLDADTRLFLADDLLQKIEAFTRTGTGPQAEWAMHVMARSEDSQRLEELRRRVQVCRQAARDMQSE-DWELAHTEEGIQTFLRRDEGDNTLAWRTHGEIEDCPVVSQLAVLREADHYHDWIPLMDKSKVVKRLG---KIEQMLWFRVAGRGLPFV-RDAVLHLYGCDASEEDLIILSGASIPEDEITESMGVRPPKKKWNHARVDIKYFSIQLRILSPTHTKIDLIYKLDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSE-PFYANYLVPYCLNLAYTKGWEVPPVPAFE 365          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: XP_002904980.1 (transmembrane protein, putative [Phytophthora infestans T30-4] >EEY53362.1 transmembrane protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 140.2 bits (352), Expect = 2.500e-29
Identity = 89/314 (28.34%), Postives = 156/314 (49.68%), Query Frame = 0
Query:  106 TMQVTETNYREAADMALLLGKDSRYLLAFNLLQQLDTLSPSLPLLHSLLHEGK---------DKGSWELIRARGEACQDALK---VEDGDGGWIFVQSLLGMDTYYK-YEEGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPFLTRDCVVRGYACDAMEDATILLVADSTEDLGSDTPIPPKPT--GWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLVNFATKQLVGVLMYLLQEASRKVAADPVK------NHHAKKIREESDFYRHWLLP 399
            ++ VT +N        LLL    R   A  L+ +L+         ++ +   K         +K   E ++ R +    ALK    ++GD  W F Q++LG+ T +K  ++G ++ K+EG      + + +++IRE DL++ W PF ++S +L+  G     ++A +  +S PFL RD ++R Y  +A+ +   LL+   + D+ S     P PT  GW   RM+IK FR  I   +    R  + A +DPK  +P  ++NF  K++ G+L+YL+++ + K+  D  K      N H ++I  +   +  WL P
Sbjct:  703 SVAVTASNIDWVWQQVLLLKVTERIFSAALLIDRLEAFLTDTDSAYTSIAAAKTKILQAMHDEKEMIEHVKERRDQGVRALKDFSDKEGDDDWQFGQTMLGVTTSWKPDDDGSVWIKLEGLVDGVDIFNTISVIREVDLYSVWTPFCSQSLLLQSMG---HVELAAYLAISSPFLQRDAIIRAYGINAVYEHNCLLLLGGSVDVSSVNSAVPVPTLQGWNAGRMEIKGFRALIEPLTRMQARTCIVANIDPKCAIPKPMLNFGIKKMAGILLYLIRKEAEKIENDTKKTETSATNEHIRRITSDPSGFYTWLRP 1013          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: CCA22750.1 (transmembrane protein putative [Albugo laibachii Nc14])

HSP 1 Score: 139.4 bits (350), Expect = 4.200e-29
Identity = 94/301 (31.23%), Postives = 152/301 (50.50%), Query Frame = 0
Query:  122 LLLGKDSRYLLAFNLLQQLDTLSPSLPLLHSLLHE-GKDKGSWELIRARGEACQDALKV--EDGDGGWIFVQSLLGMDTYYK-YEEGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPFLTRDCVVRGYACDA-MEDATILLVADSTEDLGSDTPIPPKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLVNFATKQLVGVLMYLLQEASRKV---AADPVKNHHAKKIREESDFYRHWLLPRARLYSKLRGWTFMPM 415
            +LL K  +Y      + Q+D    SL    S+  E  +DK +   I+ R    Q+AL     + +  W F QS LG+ TY+K  + G ++ K++G  +   VL+ LA+IRE DL+  WAPF   S VLK  G     ++  +F++S+PFLTRD V+  +  +A  E   ILL+  S  D   D    PK  GW VDR+DI+ FR KI    P+  +  +   +D K  +P +L+NF  ++  G++ +L    + K+     +   + H ++I+ +      WL PR   +   +    +P+
Sbjct:  631 MLLEKLEKY------ISQMDKRQASLHSCRSVQTEMEEDKIALTRIKKRNAVAQEALYEFNYEKEAEWQFAQSYLGVSTYWKPGDSGTIWLKMDGLIEGADVLNTLAVIREIDLYRLWAPFCTISEVLKEVG---RVELLAYFSVSLPFLTRDAVLHAFGVNACYEHRCILLLGQSAPD---DMIQVPKMKGWNVDRIDIRGFRAKIVPIEPSKAQACIVVNMDIKCAIPKSLLNFGIRKGAGLIHHLTSRQAMKIEKARRENTSDEHLERIQSDPSEVYSWLRPRMSQWFDYKQKNLLPV 919          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: OWZ02508.1 (Transmembrane protein, partial [Phytophthora megakarya])

HSP 1 Score: 139.4 bits (350), Expect = 4.200e-29
Identity = 75/228 (32.89%), Postives = 130/228 (57.02%), Query Frame = 0
Query:  180 EDGDGGWIFVQSLLGMDTYYK-YEEGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPFLTRDCVVRGYACDAM-EDATILLVADSTEDLGSDTPIP-PKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLVNFATKQLVGVLMYLLQEASRKV---AADPV---KNHHAKKIREESDFYRHWLLP 399
            ++GDG W F Q++LG+ T +K  E+G ++ K+EG      + + +++IRE DL++ W PF ++S +L+  G     ++A +  +S PFL RD +++ +  +A+ E+  +LL+  S E     T +P P   GW   RM+IK FR  I   + N  R  + A +DPK  +P  ++NF  K++ G+L+YL+++ + K+     DPV    N H ++I  +   +  WL P
Sbjct:  801 KEGDGEWQFGQTMLGVTTSWKPDEDGSVWIKLEGLVDGVDIFNTISVIREVDLYSVWTPFCSQSLLLQDMG---RVELAAYLAISSPFLQRDTIIKAFGINAVYENRCLLLLGGSVEASSVTTSVPIPTLQGWNAGRMEIKGFRALIEPLTRNQARTCIVANIDPKCAIPKAMLNFGIKKMAGILLYLIRKEAEKIEQNQKDPVASAANEHLRRIYSDPSGFYTWLRP 1025          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: XP_009521040.1 (hypothetical protein PHYSODRAFT_479879 [Phytophthora sojae] >EGZ25752.1 hypothetical protein PHYSODRAFT_479879 [Phytophthora sojae])

HSP 1 Score: 138.7 bits (348), Expect = 7.100e-29
Identity = 92/356 (25.84%), Postives = 169/356 (47.47%), Query Frame = 0
Query:   61 SLASTRNMSLGAAEDEMVKKPLSLQVIRSADDRFPSYNVDIEKARTMQVTETNYREAADMALLLGKDSRYLLAFNLLQQLDTLSPSLPLLHSLLHEGKDK------GSWELI------RARGEACQDALKVEDGDGGWIFVQSLLGMDTYYKYE-EGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPFLTRDCVVRGYACDAMEDATILLVADSTEDLGSDTPIPPKPT--GWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLVNFATKQLVGVLMYLLQEASRKVAADPVK---NHHAKKIREESDFYRHWLLP 399
            S++ST +    +   +        +V+++ D    +Y   +    ++ VT  N         LL    R   A  L+ +L+         + ++   K +         ELI      R +G         ++GD  W F Q++LG+ T +K + +G ++ K+EG      + + +++IRE DL++ W PF ++S +L+  G     ++A +  +S PFL RD ++R +  +A+ +   LL+   + D+ + T   P PT  GW   RM+IK FR  I   +    R  + A +DPK  +P  ++NF  K++ G+L+YL+++ + K+  D  K   N H ++I  +   +  WL P
Sbjct:  681 SISSTSSREWASGRGQRRAGSSDSEVVQTTDTNSDAYG--LTDYSSVTVTAENLDWVWQQVQLLKATERIFSAALLIDRLEAFLTDTGSANKIIAAAKTRVLRAMHDERELIDHIKERRDQGVKALKEFSDKEGDDEWQFGQTMLGVTTSWKPDADGSVWIKLEGLVDGVYIFNTISVIREVDLYSVWTPFCSQSLLLQDMG---HVELAAYLAISSPFLQRDAIIRAFGINAVYENRCLLLLGGSVDVSTVTSRVPVPTLQGWNAGRMEIKGFRALIEPLTRTQARTCIVANIDPKCAIPKAMLNFGIKKMAGILLYLIRKEAEKIEHDHKKNAANEHLRRINSDPSGFYTWLRP 1031          
BLAST of NO23G00280 vs. NCBI_GenBank
Match: ETK77180.1 (hypothetical protein L915_16545 [Phytophthora parasitica])

HSP 1 Score: 138.7 bits (348), Expect = 7.100e-29
Identity = 94/359 (26.18%), Postives = 172/359 (47.91%), Query Frame = 0
Query:   61 SLASTRNMSLGAAEDEMVKKPLSLQVIRSADDRFPSYNVDIEKARTMQVTETNYREAADMALLLGKDSRYLLAFNLLQQLDTL------------SPSLPLLHSLLHEGKDKGSWELIRARGEACQDALKVEDGDGGWIFVQSLLGMDTYYK-YEEGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGPFPSADMALHFNLSMPFLTRDCVVRGYACDAMEDATILLVADSTEDLGSDTPIPPKP--TGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLVNFATKQLVGVLMYLLQEASRKVAADPVK------NHHAKKIREESDFYRHWLLP 399
            S AS +++S G++++   +          AD   P Y+       ++ +T +N        LLL    R   A  L+ +L+              +    + H++  E +  G  +  R +G         ++GD  W F Q++LG+ T +K  E+G ++ K+EG      + + +++IRE DL++ W PF ++S +L+  G     ++A +  +S PFL RD ++R +  +A+ +   LL+   + D+ + T   P P   GW   RM+IK FR  I   +    R  + A +DPK  +P  ++NF  K++ G+L+YL+++ + K+  D  K      N H ++I  +   +  WL P
Sbjct:  675 SWASGKSLSQGSSDETGQQ--------TDADCGLPDYS-------SVIITASNIDWVWQQVLLLKATERIFSAALLIDRLEAFLADTGNANKTVAAAKTKIQHAMHDEQEMIGHVKERRDQGVKALKEFNDKEGDDEWQFGQTMLGVTTSWKPDEDGSVWIKLEGLVDGVDIFNTISVIREVDLYSVWTPFCSQSLLLQAMG---HVELAAYLAISSPFLQRDAIIRAFGINAVYENRCLLLLGGSVDVSTVTSAVPVPMLQGWNAGRMEIKGFRALIEPLTRMQARTCIVANIDPKCAIPKPMLNFGIKKMAGILLYLIRKEAEKIENDQKKTETSAANEHIRRITSDPSGFYTWLRP 1015          
The following BLAST results are available for this feature:
BLAST of NO23G00280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25463.11.100e-4231.31START-like domain protein [Nannochloropsis gaditan... [more]
CBJ32035.12.500e-4233.65conserved unknown protein [Ectocarpus siliculosus][more]
EJK43974.11.100e-3431.56hypothetical protein THAOC_37531, partial [Thalass... [more]
GAX11088.11.800e-3234.98hypothetical protein FisN_9Hh178 [Fistulifera sola... [more]
EWM27447.16.500e-3028.28transmembrane protein [Nannochloropsis gaditana][more]
XP_002904980.12.500e-2928.34transmembrane protein, putative [Phytophthora infe... [more]
CCA22750.14.200e-2931.23transmembrane protein putative [Albugo laibachii N... [more]
OWZ02508.14.200e-2932.89Transmembrane protein, partial [Phytophthora megak... [more]
XP_009521040.17.100e-2925.84hypothetical protein PHYSODRAFT_479879 [Phytophtho... [more]
ETK77180.17.100e-2926.18hypothetical protein L915_16545 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00280.1NO23G00280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|193392gene_8367Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00280.1NO23G00280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00280 ID=NO23G00280|Name=NO23G00280|organism=Nannochloropsis oceanica|type=gene|length=7610bp
GTATGTCTCTCTATTCCCTGCGCATTAAACTCACATGACAATTATCATTT
TGAACACATGTGCTATGCATATTATCTGCTCAAGAAATGGCACAGACCTC
AAATATTCTTATTCCGATCCCATCATTTTATTGTTTTTTTGCGAACAACC
GTCCCATGCCGAAACCGTACGTCACGCTTTCCTTCGGTCCTTGACGCCAC
CCTACGCTGCCATGGGCACGAGGCGCACCATTCCCTCAATTAAGAGGCCA
TACTACCTTCCTCCTTAAACACAGAATCCTAGATGATGAGGCAGGCATGA
GAGCTATCAGGGTGGGTGGAGGCACACAGGTCATAAGAGGCCGGATGTGT
CGTGCGCACGACATGACGGGTCTGGCGTCACTGCAACGCACTTGACGACA
CCTTCTCCCTGCTCCTGGGGCTACCTGTCTGCCCCCCTCGCCCTCCTCTC
CAATCTTTCACTCATCGCTTCTTCCTTCTCTGCCAAAGACACTCATACCT
GCTCTTCTGCCCCCCCTCCCCTCGCACACAGCCACAGCCAGAGACGGCCC
ACACTCAAGCAGACGGGACAAGGGACACGCACACGTGCATTCGGACAGCA
AGGCAGTATCGCGTGTCCCTTTTACATTCAAAACCATCTCGAACTACGCG
CGCCCTCCTGAACTTCCTATACCATGTGTTTTCACGGGGTCCCGACTCCT
ATGCCCCATTTGCTGGGCATCGCTGCCGCAGCGGCCTTGAGGGGGAGGGG
AACGTGCAGTATTGTTTTGAGCGTGCGGGCGTCCCCCCTGCGAGGCTTTC
CTTGCCTCCTCCCTCCTGAGCTAATGTTGACTCAGACACATACAGAGGAA
GAGGGCAGAAGAAAGCTCGGGAAGATGGAAACGTCCCTGCCCGTTTTACC
CTCCCTCCTTCCCTCCCTCCCTCCCTTAGCAAGGCGGCAGAGGAGGTATT
CGAGCACTCTACTAGCACTCGCTCTGAGCCCTCCAACTTCCCTCCCTCCT
TTTCTCTCTCCCTTGTCACAGGCCTCTCGCCGCCCTCATCGTCGCCGCCT
TCCTATCTCTTTGCTGCACGTGTGTGTGCGCTTCCCCGTTGGGAGAGAAG
TGAGAGGGGAAGAATCAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGTT
TAGGTGCAGTATTAGTAGTTACAGCAACAGTAAAGGAAAGGAAAGACATG
ACTGCTGCAGTATCGAGTCGTTTCCGCTTGTTAAATGAAGAGGAGGCGGG
CGTGGGCCGCACGTACCGTTTGAGCATGGATGGGCTCCTGgtagggaggg
agggagggaggtagggatggaaggaaggaaggaggggtgggagagggagg
ggaaaaccaaaagacgcctggcggagaggaagcagggagaaatgaaggaa
gggagggagggaggggaggagggagggttgagtacctacctgtcggggtc
atggacgggcttttcgagtcttgccacactcacccttccctccctccctc
cctcccacctccctccctccctccctccctccctccctcagGACCTAACT
TCTAAAACTACCACCACTATTTCCTCGCCAAACGGGAAGAGGAAGAAGAA
GAAGAAGAAGGGAGGGGCAGGAACAGGATCCTTAGCGAGTACGAGGAACA
TGAGCCTAGGGGCGGCGGAGGACGAGATGgtaagagaaggagggagggag
gaaagacatacttggaaaccaatgaatgcagatgacaagggaatcgacct
ttgatttatgcgtgcgcctcatcttccctccctctctccctctttccctt
cctatctccctccttgtagGTCAAGAAGCCCCTCTCCCTCCAAGTGATCC
GCTCGGCCGATGACCGTTTTCCTTCCTATAACGTTGACATTGAAAAAGCC
CGAACTATGCAGgtacatccttctctccccctccccctccttcccctcct
ttgtcttcctccttgtccctctcccgacagttgcccctcacgaaccagcc
ctctcctcctccctctctccttccctcccttcctccctcccttcctccct
ctctctgccccctgcaccacctcctgcttcaaaccctttccccctccctc
cctccctccctccctccctccctccctcctagGTGACGGAAACCAACTAC
CGAGAAGCAGCCGACATGGCCTTGCTCCTGGGGAAAGACTCCCGgtacgt
ccctccctccctccctccctccctccctcctcccctccttccctccctcc
cttcctccttccctccttccctccttccctccttccctcctttcctccct
ccctcctttcctccctccctccctccctccctccctcctcccctcctccc
ctccttccctccttccctccctccttccctccttccctccttccctcctt
ccctcctcccctccctccctccctccctccctccctttcagttttaagct
gccacggtcacagaagacaatctgattcccctctccctccctccctccct
ccctccctccctccctagCTACCTGCTAGCCTTCAACCTCCTGCAGCAGC
TGGACACCCTATCCCCCTCCCTCCCCCTCCTCCACTCCCTCCTCCATGAA
GGCAAGGATAAGGGGAGCTGGGAGCTCATTCGTGCCCGTGGCGAGGCCTG
TCAGGACGCACTCAAGgtactccttccttccctccctccctccctccctc
ccgtatataatgtcaaccctccctcccaccctcccaccctccatccctcc
atccctcagGTTGAAGATGGCGACGGTGGATGGATCTTTGTTCAATCTCT
CCTAGGCATGGACACTTACTACAAGTACGAAGAGGGCCAGCTCTACTGCA
AGgtatgcccttcctccctccctccctccctcccctctgtttttccttcc
ctccccatcatacccacctcattgagcccatcatcttgcctacgcccccc
acataatatcccttactatacttcaagaacaccttttcttcctgatcccc
tccttccctccctccctccgtcctcgaccaactgaccatggactatgact
ccctccctccctctctctccccctccctccctccctcagGTGGAAGGCGA
CTACAAGGATTGCTCAGTCCTCGACCAGCTGGCCATCATCCGCGAGGGAG
ATTTGTGGAACAGGTGGGCGCCCTTCGTCAATAAGAGTGCGgtaggtagg
gagggagggaaggagggagggaaggagggagggaaggagggagggaggga
gggaggggtgtcatttgaacaggcttggcaacggaccgtcctaatcggtt
ttagacaggtgtggaaacaaagcagaatgcctcttcctcaccctccctcc
ctccctccctcccaccttacttcagGTGCTCAAGCGCTTTGGCCCCTTTC
CGAGCGCCGACATGGCTCTGCATTTCAATCTAAGCATGCCTTTTTTGACA
CGgttcgtcccctccctccctccctcgctccctccctctttccctccctc
tctccctctttccctccctccctccctcccaccctccctcccaccctccc
tccctccctccctcccaccctccctccctccctcagAGACTGCGTGGTGC
GTGGATATGCCTGTGATGCGATGGAAGATGCTACCATCCTCCTCGTGGCC
GACAGCACGGAGGACCTCGGCAGTGACACCCCCATACCACCAAAGCCCAC
CGGCTGGGTCGTGGACCGCATGGATATCAAGAACTTCCGGACCAAGgtaa
gccttggccctccctccctccctccctccctccctccctccctcccttcc
tccctcccttgttcgaggctgactgtaagccctcagcctctaatgccaag
ggagtgatcgagagtcttccctccctccctccctccctccctcccttcct
ttcattcttctgtaccaacaaggcactggtcgacaccctctcatccctcc
ctccctccctccctccctccctccctccttcagATCACCTGCACCAGCCC
CAACAGCGGCCGTGTCGTCCTCTCTGCCGTCCTAGACCCCAAAACTACAC
TCCCGgtacgccctcccttcctccctccctccctctctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctcctttcccttctaagctttccaactttgctttcattcaaatggt
gggcgtccctattaatatgtctcatgtgaataaatggaggaatattgtta
ggtgaattagtcaggtaaatgaatacattagagaattcaaaagatatgta
aaataagtaattgcattcaatactcacgtgcgaatacatacaacgctgtc
caatatattaattaacaccattattattattaggtaaatgaatacattag
agaattcaaaagatatgtaaataagtaattgcattcaatactcacgtgcg
aatacatacaacgctgtccaacatattaattaattaacagCCGACGCTGG
TTAATTTCGCCACCAAGCAGCTGGTGGGCGTGCTCATGTATTTACTTCAG
GAAGCTTCGCGCAAAGTGGCAGCCGATCCCGTGAAGAACCACCATGCGAA
GAAAATACGAGAGgtagggagggagggagggaatgaaggatggaggaagg
gagagaaagagagcgatacatgaatatttttcattgtattccctaaaatc
tgctttcctccctccctctctcccttcctctctcctttcctcctcccgcc
ctgcttcccttcctcctcttcctccagGAATCAGATTTCTACCGGCATTG
GCTCCTCCCCCGTGCCCGTCTCTACAGCAAATTGCGCGGgtaagccctcc
tcccctccctccctccctccccatctccctttcctcccctcactctcttt
cctctccattacgctttcacctcgtctagcccgtcattttgaccgtcaca
tctctcatgttctttccaacaagttacaatcccaccattcaccctccctc
cctccctccctccagCTGGACATTCATGCCGATGGTGGCTCTAGAGGGAT
TCGAACCACCCACGCCGGCCTTAACGCCCGTTAGCAGCGAACGTCAAGAG
CAGGGGAAAGgtaatgaggcaaggagggagggagggagggagggggggaa
gggggggggaagatagtaatgtattgctccatggaagaagctgaactctc
aacctcctccttctcttcctccctccctccctccctccctgccttatccc
taaagCCGTCACTGCAGCTGGCTCGCTCCCTCCCTCTCGCATGGTCACCT
CCGCCGGCGCCCCAGTGgtatgtcaccttccctccctccctccctccctc
cctccctccctccctctttccctccctccctccctccctcctcaaccaca
agcctcaatctcaacctacattcctccctcccactttccactttcccctc
ccttcctccctccctccctccctccctcagGTCAGCGGCAACGAGACTGC
CAAAGCCAAAAAGAAGAAGCTTCGGTTCAGCTTTTTCAGGAGCAGTAAGA
AGAAGAAGgtatgtactccctcccttcctccctctttccccccctccctc
cttccctcccttccctccctctctccctccctccctccctctctctcccc
ctccccccctctccccctccctccccctctccctccggctcggaaagagt
aagaagaggaagaaatgtactttccctcccttcctccctcactctttgtt
tcacggaaacggccacagcagcagcagcagctgcagccgcgggaggggct
tcaagaaaattcgtttaaaaccatcacttacccttccgtccctcccccgt
cctccctccctccctccctccctccttcctcaaaagGAAAAGACAGCTGC
TGCCGCCGCCGCCGCCGCCGCAGCCGCTGCTGCGGCTGCAGCCCAAGAGC
CCTTGCTGAAGACTATCATCATGTCGCCCGTCCGCCTGCTCTCTCCCGCC
CGAGCCTTGATGTCCCCCGCTAGAAAgtaagtccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctaagtccctccctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctctct
ccctccctccctccctccctccctccctccctccctctctctctcaaaga
taatgaatgaccgacaggaaaccaaggaagaatttagtgctaatactcac
catccctccctccctccctccctccctccctccctccctccctccctccc
tccctccttccctccctccttccctccctcagGTCTCCCCACTCCATCCG
CTCCGGGTCTCCTTATCGACGAGCTAATGCCCCTTGGACTTTTGCCCTCC
TTATCGCCTCGTACTTTGCTCTCAAGgtaacgacggaaagatgatgagga
aggaagaagggagggaaggagggagggaggcacggtgggaaatggccttt
tccatcaccatcgcttctttccttcaaactctcacaaaacccctccctcc
ccccctccctccagGCCTCCGCCCTCGCCATCCTCCTTCGGGTCCACACG
GGAGTGATTGGTGAGACGCTCTTCCTCATGGCCCTCCTCCAGgtaaccct
accctcccccctccctccctccctccctctttcccttctcctcgtcgagc
tcgtcattctgacccttatccctccctatcatacatttctccattccccc
acctccttccctctcttcctccctcccttcctccctccctccctccctca
gGTCGTCCTCCACCTGTCCGTGGCCTATGGATTTTTCGAGTCCGGCTATG
TCGGTCGTATCTTCAACGAGCGgtacgtcatgccctccctccctcccgcc
ctcccttcctccctccctccctgtctgtctgtccactgcctagcgcattt
gcaaacaagagaaaaaggctgactggtactcacctttctaccctccctcc
ctccctccctccctccctccctccctccctccctccctccctcccagCGC
CCACATCACCCTCCCCGCGGCCCGGCTTGCGCTGGGCCTTATCTCGGGGG
TAGGCGGTGTGCTGGCATCAGCAGCAGCCTTCCTGCGTGTGTATCGAGTG
GAGTTTGTTCGACGGGAAGGGATGTCGGAAGgtaaggaggagggagggaa
gaaaggaaggagaagaagggagggaaaagagagggggagggggaagggag
ggaggggggaaggggacgacaaagacgcgagaggggaaaggagggaggga
gggagggggggagagaggggggagagaaaataaacggtatttaattgcat
atttattcaaattcccacccaccctccctccctccctccctccctttttc
tgtgcagGCGAGTTCGACCGTGCGGCGTCGGCGGTCATCCAGTGGTGGAA
CACCTCCTTAACACTATTTCTGGTGCTGATTGTGATTCGACCGGACCTGG
TCCGGAAGGCTGTCAAGGAGCTCACGCTTGCCTATTAAGGGAGGGAGGGA
GGGAGGGAGG
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protein sequence of NO23G00280.1

>NO23G00280.1-protein ID=NO23G00280.1-protein|Name=NO23G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp
MTAAVSSRFRLLNEEEAGVGRTYRLSMDGLLDLTSKTTTTISSPNGKRKK
KKKKGGAGTGSLASTRNMSLGAAEDEMVKKPLSLQVIRSADDRFPSYNVD
IEKARTMQVTETNYREAADMALLLGKDSRYLLAFNLLQQLDTLSPSLPLL
HSLLHEGKDKGSWELIRARGEACQDALKVEDGDGGWIFVQSLLGMDTYYK
YEEGQLYCKVEGDYKDCSVLDQLAIIREGDLWNRWAPFVNKSAVLKRFGP
FPSADMALHFNLSMPFLTRDCVVRGYACDAMEDATILLVADSTEDLGSDT
PIPPKPTGWVVDRMDIKNFRTKITCTSPNSGRVVLSAVLDPKTTLPPTLV
NFATKQLVGVLMYLLQEASRKVAADPVKNHHAKKIREESDFYRHWLLPRA
RLYSKLRGWTFMPMVALEGFEPPTPALTPVSSERQEQGKAVTAAGSLPPS
RMVTSAGAPVVSGNETAKAKKKKLRFSFFRSSKKKKEKTAAAAAAAAAAA
AAAAAQEPLLKTIIMSPVRLLSPARALMSPARKSPHSIRSGSPYRRANAP
WTFALLIASYFALKASALAILLRVHTGVIGETLFLMALLQVVLHLSVAYG
FFESGYVGRIFNERAHITLPAARLALGLISGVGGVLASAAAFLRVYRVEF
VRREGMSEGEFDRAASAVIQWWNTSLTLFLVLIVIRPDLVRKAVKELTLA
Y*
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