NO23G00210, NO23G00210 (gene) Nannochloropsis oceanica

Overview
NameNO23G00210
Unique NameNO23G00210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1584
Alignment locationchr23:90739..92322 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistone-lysine N-methyltransferase EHMT2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:90739..92322 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
The following BLAST results are available for this feature:
BLAST of NO23G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR039ncniR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR047ngnoR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G00210.2NO23G00210.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO23G00210.1NO23G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632786gene_8359Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G00210.2NO23G00210.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO23G00210.1NO23G00210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G00210 ID=NO23G00210|Name=NO23G00210|organism=Nannochloropsis oceanica|type=gene|length=1584bp
TCCCTCCCTCCCTCCCTCCCTTCCCCTTTCTCAGACCAAAATATCATGGA
GGTGGAGGTCAACTTCCCCTACCAATATGGCCTTGATACCACTCTACATG
ATGCCCTTCAGCAAGGGTTGGGGCTCCCGCGTGTCATGGAGCTGGTAGAA
GATGAAGAGAAAGATGTCAATGGACGAGACTACAGTGGCAAGACTCCTGT
GATGTTTGCTGCTGCTGGTCGTGGTTCCCTCCCGGTCCTCAGCTATCTCC
TAAAGCGAGGCGCGGAAATCAATGCCCAGGACAAGGAGGAGTTGACTGCC
TTGTATTACGCATGTCGAAATGGCCAAGCGGCGCAGgtgaggcaacggac
gagaaagggaaagatgaaaagaggtggtgactgattgtgggaatcgcacc
attcgaactgaccatgctatacgcttccccctctttcccctctttagGCT
ACATTGCTGCTGAAATCAGGAGCTGATCCCTTGTTGGTAGGCAAGGATGG
GACGACCTGTTTGATCGCAGCGACTCGGTATGGGAATCCCTCGGAAACGA
TCAAGGTGAGGGAGGGAGCGAGGGAGTGAGGGAGTAAGGGGGCACAGTGG
GACAAGAGGCGAGGCAAAGAGAAACGACAAATAGAAATGTCGGACGCCAG
GAGGAAAAATAACCCAACAAATAATAGAAAATGGAACGCAGTCACTGATA
CCCTTGTCTCCTTCAAATATTTCCTCATCTGGGCCTATTTATCTCACACC
ACACAGGCCCTGCTGGCCTTTCGCCCGTCCCTCCCTCCCTCCCTCTTTTT
GAATGCCACTGATCGTCAGGGATGGTCCGTTCTCCACTGGCTGTGCTCTC
GAAAAGAGGCGCCTGACATCCTCCGTTCCCTTTCCTTCCTACTTGCTGCC
GGGGTTAACGTAAATTTGAAAAACAACAGGAGACTCACCGCGCTTGAAGC
TGTGTTGCTGGCACAAGGGATGAACAGCAGCAGCAGCAGTAGTTATAGTA
GTAGTGGCAGCAGCAGTAGCAGCAGCAGTAGCAGCAGCAGTAGTAGCAAG
AAAAGGAGCAAGATAGAAAAGAGGCTGAGAGAGGGAGGGAGAGAGCCTGA
GAGGGAGGGATGGGTCCGAAAAATAAGGGGTGTAGAAGAGGAGGGAGGAT
GGTGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGAA
GAGGAGACGGTATCGGTGTTGTTAAAGAGGAGGCGACAGGGAGGGATGGC
GTTGCCACGGGTGGTGGTAGTGAGAGAGAGGAAGGAGAAAATAGAAATGG
AGGGAGGGGAGGAGGGGGGGAATCAGGGAGGGGGGGAGGGGGTGGAGCGA
GTGGTGGCTGTGATGAGGTATGTGTGTGGAGGGACAGAGGAGGAGGTGGG
GGGAGGGAGGGAGGGAGGGAGGATGATTGCGGATCATTTTAGAGAGGTCA
TGGAGCTGGTGCGGGTACCGTGGGCAGAGGAGGAGGCGAGGAAGGAGGAG
GATGAGGAGGGAAAGGAAGAGGAGGCGGAGGAGGAGGAGGGGAGAAAGGA
GGGAAGAGAGGAGGTGGGGGTGAGAGGGGCCTAA
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protein sequence of NO23G00210.2

>NO23G00210.2-protein ID=NO23G00210.2-protein|Name=NO23G00210.2|organism=Nannochloropsis oceanica|type=polypeptide|length=316bp
MSDARRKNNPTNNRKWNAVTDTLVSFKYFLIWAYLSHTTQALLAFRPSLP
PSLFLNATDRQGWSVLHWLCSRKEAPDILRSLSFLLAAGVNVNLKNNRRL
TALEAVLLAQGMNSSSSSSYSSSGSSSSSSSSSSSSSKKRSKIEKRLREG
GREPEREGWVRKIRGVEEEGGWWGEGGREGGREGGREEEETVSVLLKRRR
QGGMALPRVVVVRERKEKIEMEGGEEGGNQGGGEGVERVVAVMRYVCGGT
EEEVGGGREGGRMIADHFREVMELVRVPWAEEEARKEEDEEGKEEEAEEE
EGRKEGREEVGVRGA*
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protein sequence of NO23G00210.1

>NO23G00210.1-protein ID=NO23G00210.1-protein|Name=NO23G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MEVEVNFPYQYGLDTTLHDALQQGLGLPRVMELVEDEEKDVNGRDYSGKT
PVMFAAAGRGSLPVLSYLLKRGAEINAQDKEELTALYYACRNGQAAQATL
LLKSGADPLLVGKDGTTCLIAATRYGNPSETIKALLAFRPSLPPSLFLNA
TDRQGWSVLHWLCSRKEAPDILRSLSFLLAAGVNVNLKNNRRLTALEAVL
LAQGMNSSSSSSYSSSGSSSSSSSSSSSSSKKRSKIEKRLREGGREPERE
GWVRKIRGVEEEGGWWGEGGREGGREGGREEEETVSVLLKRRRQGGMALP
RVVVVRERKEKIEMEGGEEGGNQGGGEGVERVVAVMRYVCGGTEEEVGGG
REGGRMIADHFREVMELVRVPWAEEEARKEEDEEGKEEEAEEEEGRKEGR
EEVGVRGA*
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Synonyms
Publications