NO22G02210, NO22G02210 (gene) Nannochloropsis oceanica

Overview
NameNO22G02210
Unique NameNO22G02210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4017
Alignment locationchr22:697666..701682 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:697666..701682 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011124Znf_CW
Homology
The following BLAST results are available for this feature:
BLAST of NO22G02210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR104ngnoR104Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G02210.1NO22G02210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G02210.1NO22G02210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G02210 ID=NO22G02210|Name=NO22G02210|organism=Nannochloropsis oceanica|type=gene|length=4017bp
ACAGAAGCAGCATGTCCCTCCGTCTGGCCATCAAGGCCTCCCTGGAGACG
GCAGTTCCTGTACCAGGGGTAACAGGTGCAGCCGCTAGAACAGGCGAAGG
GGCAGGTGGGGGACAGCGGCGACCACCACAGGCAGCAGGAGCAGGAGGAT
CAGGGGGAGGGAGCTTTGTGAAGCTGAAGGGACGAgtaagtcacgtagag
aaggaatagagggatagtaggaagtgacgggggtatcgtaagggggtagc
gagcaagccctcgcaggacaccgtcccgccttccctctcccccccgcatc
cattcacgcccttatgtttatccctccatccactcttctcagGAGGCTGG
TCACAAGAGCAAGCCTAGCAATAGTAGTAGCAACAGCAGCATCAGCAGCA
GCTGTAGCGAAAGAGGGGAAGGAAAAGGAAGAATCAAGGGCCCCAAGAAG
GGTGTGGTATCCAGCGGCAGCAGCCTGAGCAGCAGCAAGCAAATACGGCA
CAAGAAGGAGTTCAAGGAGAATGTCAAGAAGACGATGAAGAGCAGCAAGA
GCAGCAGCAGTGGTAGCGTCTCGAACAGTGGGGGAGGGATTAATAGCTCA
CGTACCGGCACCCAGCCACTCCGAAAGCTCTCCTCGGGGGCAAGCATTGA
GGACTCCAGCCTTAGTGCCCCTTCCTCTTCCTCCTCCTCGGAGGCAGGGG
AGGAGGATGATGAGCAGGACGAGGAGGAAGGCTCAGGAAATGAGGAGTTG
GAGGACTCGGACGAGGAGGAAGGGGAGAAGAATGTGGTTAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGTGGTGAAGGGAGGACAAAGGAAAGAG
GGAGTGAGAGTAGTGAGGGAAGGATGGGGGAGGGGGAGCGGGGCCGAAGT
ACGGGGGCGTCAGATGAAGTAGTAGCAGCAGCAGGAGGAGGAGCCAAGAG
GAAGCCAGCGAAGAAGCCAGCGAAGGAAGGGGAGGAAACAAAGGTGGAGG
AAGTGGAAGGGAGGGAGGGAGGGAGTGGGATGGTAGCCCCGCCCAGTCCT
GGGATGTATCGACGGGCCCAGGGGCTGAGATACATAGTGGGCGCGAGAGT
TAGGTCGAGGAAGGGGGGAAGGGAGGGGTGGTGGGCGGGGACGGTGAGTG
CGGTGGACTACCTGGAGGGGAAGGGCTGGATCGAGTTCGAGGAGGCCGAA
GACGAGGAGGAAGACGAGGCCTTTGACCTTGACAGCATCGGGGTGGTATT
GGAGACGTCGGAAGCGGGGGAGCTACAATTGACCAGTCGGAAGAGCATCG
GGGGTAAGAGGATGTCGTCCTCCTCCTCCTTGGCAGCATCTTCCCCTCCG
GAGGGGCGAGGAAAGAAGGCTGTGGCAGCAGCAGCAGCAGCACCAGCACC
AGCAGCAGTGGCAGCAGCAGGGGGAGCGACGACGTACAGCAGCATCTTCA
ACGGTGGGAGTAAAAAGCGGCCGCGGACAGAGATAATCGGGGATGAAAGC
GTCAAGCAAGAGGGAGGATCATCAGGAGGAAGGACAGCAGCCCCAGCAGA
CGCTAAGAAGAAGAAGAGCAAGACAGCTGGCGGCAAAGCCAAGAGCAGCA
CCTCTCACCGTGCAGCTGCAGCAGCCATGAATAGCAGGAACGGCAGCAGG
AGCGTTGGTGGCAGCAGCACCAGCAGGCCTTCGGATCAAATGGTGATTGA
TTCAGACGAGGCTGTCTCCAGCGAGTCCTCACCTGAGAAGCTCTCCCTTT
CTCCCGCTCGCCCCTCCCCCGCTCCCTCAATGCCAACGGGGGTGGTGAAA
TGGGAAGATGGGGTCCAAGAAAAGAGAGAGGGAGGGAGGAGCGCGAAACA
GGATTCTCGTTCGCTGTCGGAGGGCCTGGCTGATAGAGATGAGGAGGAGG
ACGAGGGGGAGGAAAAGATGGAGGAGGAAGGGAAGGATCATGAAAGCCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGCACGA
GCGGCAGCAGCAGCAACAACAACGAGAAGGACAACGAGGACAACAAGAAC
CACCACCACCACCACCACCACCACCACCCCAACAAGAGGAGCAGGAACAC
GAGCGGCAGCAGCAGCAACAACAACGAGAAGGACAACGAGGACAACAAGA
ACCACCACCACCACCCCAACAAGAGGAGCAGGAACAGGAACAAATGTCGG
TTCTTGGAATTCAGGGAAAAGGAAAGGAGACAGGGGGGGGAGGAGGGGCG
GAGGATTGGGAGGATGCATGTGCTCCTGCCCCGCCCAAGCTACGAACGGG
CGCGGTAGACGGGGGAGGAGAGGGAGGAGGTGGGAAGAAGAAAAAGAAGC
AGCAGCCGCCGGCGCAGGCGGCAAGCAGTACTCCCTCTCCCCGCCCGCTC
TCCCTCGATCCATCCTCCTCGCCCTTCCTCCCCTTGCCGCCTGCTACGGG
TGGCCAGCAGCAGTTAGGTGGGATTCCTCCCCCCGCGTCGGCCTCCTCGA
TCATTTCCACGGCCTCCTCCTCCTCCAACAACTCCTTCTCCGTCCAAAAG
AAAACCAAAAAAAGCAGCTCGACCCCTACTAACCGGCAATCTCTCACACC
TTCCACCTCCACCTCCTCTGTTGCAGCAACAGCCTCCACCTCCTCTGTGG
CATGGATCCAGTGTGATGAATGCCAGAAGTGGCGGCGTCTACCCCTCCCC
CCTTCGGCCCCTCCACCCCTTCCTGATCAGTGGTTCTGTTCCCTCAACAC
CTGGGATTTGCCGCGGGCTTCTTGCCAGGCACCGGAGGAGGAATGGCAGC
AGGAGCAGCAGCCGCAGCAGCCGCCAGGAGGGAAGGTGGAAGGTGGGGGA
CGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGGAGAGGTGGAGGGGAGGA
GGGAAAGAGGGCCAAGGCGTTGGCGGCGGCAACAGGAGCCGCTTGTCCGA
AAGGAGGAGGGAAGGGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAAGTCGGAGTTGTCGGTCATATCGGCGAAGGAGTTCTTGGACAGGGG
TGAAAATGAGAACAGTCATAAGGTGGGAGGATCAGGAGGAGGAGCAGGAG
CAGCAAGAGGAGGTGGAAAAGCAGGAGGAGGGGCGATTGGGGGCATCATC
GGCAAGAAGAGTGCGGCCTCGCCTCGCAATAGCAATCAGTCGTTACTCCT
CCCTCCCTCTTCCTCCCCCCCCGAAATCTTCGCCTTCCCTCCCTCCAACC
CTCCTGGCCTCGACCCTGCCCCTGGCCACTACACTCTCCCCGTCGGCCCG
CTCGACGGCAACGAGCCTCCCCCCCTCCCTCCTTCCTCCGCAAGCGCAGC
CGCTGCAGTCGCCGCCTCAGCTGCGGCTGTGGCTGCGGCCAAGAAATGGG
TGTGTTGCGATGGGTGCGGCAAGTGGCGGCGAGTCCCTGCCTCTGTCGAT
ACCGCGGCTTTGCCCGAGGCCTGGTACTGCCACATGTCCACGTGGACCAC
CACCCACCTCACGTGCGCCGTGCCCGAGGGCCAGGAGGAGTGTCTTCCCT
TGTCTTCCTTTCCGCCCTCCGCCCTTCCTCCCCCCATCCCGTCGTCCTTG
TCCTCGGCGGTGCCCCTGCTCCCGCCTGTGCTGGTGACTCCCCGGAACCA
GACCGCTGGTGGTGGAGGAGGAAGAGCCGCAGCAGGAGGGTCGGGCATAC
CGTCGTTCTCGTCCTCGGGTTCGAAGGGAGGCAAAGACGAAGAGCTCGAA
TGGGCCGCGGCGGCCGCAGCAGCAGCAAGTGCGGCGGGAGGGATGACGGG
GGGGAGGGTTGCTGGAGATACGAAAGAAAGTGGGAAAGGAGGAGGAGGGG
GAGGGGGGGCGGGAGCGGGCACAAAAAGGGACGGGGCAGTGCCGGGGATG
CCAGCGGCTGGGGCTTGCTTCCTTCTCCTAGAGAGGGAGGGAGGCGCACC
CCTCCTCAAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGCAGTCGGAGCAA
TGCGCGTGGGAACCTGA
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protein sequence of NO22G02210.1

>NO22G02210.1-protein ID=NO22G02210.1-protein|Name=NO22G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1283bp
MSLRLAIKASLETAVPVPGVTGAAARTGEGAGGGQRRPPQAAGAGGSGGG
SFVKLKGREAGHKSKPSNSSSNSSISSSCSERGEGKGRIKGPKKGVVSSG
SSLSSSKQIRHKKEFKENVKKTMKSSKSSSSGSVSNSGGGINSSRTGTQP
LRKLSSGASIEDSSLSAPSSSSSSEAGEEDDEQDEEEGSGNEELEDSDEE
EGEKNVVSSSSSSSSSSSSGEGRTKERGSESSEGRMGEGERGRSTGASDE
VVAAAGGGAKRKPAKKPAKEGEETKVEEVEGREGGSGMVAPPSPGMYRRA
QGLRYIVGARVRSRKGGREGWWAGTVSAVDYLEGKGWIEFEEAEDEEEDE
AFDLDSIGVVLETSEAGELQLTSRKSIGGKRMSSSSSLAASSPPEGRGKK
AVAAAAAAPAPAAVAAAGGATTYSSIFNGGSKKRPRTEIIGDESVKQEGG
SSGGRTAAPADAKKKKSKTAGGKAKSSTSHRAAAAAMNSRNGSRSVGGSS
TSRPSDQMVIDSDEAVSSESSPEKLSLSPARPSPAPSMPTGVVKWEDGVQ
EKREGGRSAKQDSRSLSEGLADRDEEEDEGEEKMEEEGKDHESQQQQQQQ
QQQQQQEQEHERQQQQQQREGQRGQQEPPPPPPPPPPQQEEQEHERQQQQ
QQREGQRGQQEPPPPPQQEEQEQEQMSVLGIQGKGKETGGGGGAEDWEDA
CAPAPPKLRTGAVDGGGEGGGGKKKKKQQPPAQAASSTPSPRPLSLDPSS
SPFLPLPPATGGQQQLGGIPPPASASSIISTASSSSNNSFSVQKKTKKSS
STPTNRQSLTPSTSTSSVAATASTSSVAWIQCDECQKWRRLPLPPSAPPP
LPDQWFCSLNTWDLPRASCQAPEEEWQQEQQPQQPPGGKVEGGGRGGGGG
GGGGGRGGGEEGKRAKALAAATGAACPKGGGKGGEGGREGGREGGKSELS
VISAKEFLDRGENENSHKVGGSGGGAGAARGGGKAGGGAIGGIIGKKSAA
SPRNSNQSLLLPPSSSPPEIFAFPPSNPPGLDPAPGHYTLPVGPLDGNEP
PPLPPSSASAAAAVAASAAAVAAAKKWVCCDGCGKWRRVPASVDTAALPE
AWYCHMSTWTTTHLTCAVPEGQEECLPLSSFPPSALPPPIPSSLSSAVPL
LPPVLVTPRNQTAGGGGGRAAAGGSGIPSFSSSGSKGGKDEELEWAAAAA
AAASAAGGMTGGRVAGDTKESGKGGGGGGGAGAGTKRDGAVPGMPAAGAC
FLLLEREGGAPLLKGRREGGREGAVGAMRVGT*
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Synonyms
Publications