NO22G02050, NO22G02050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G02050 vs. NCBI_GenBank
Match: EWM20548.1 (surfeit locus protein 1, partial [Nannochloropsis gaditana]) HSP 1 Score: 174.1 bits (440), Expect = 7.900e-40 Identity = 79/114 (69.30%), Postives = 95/114 (83.33%), Query Frame = 0 Query: 72 DKAGLLLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNLPESHRRYHVRGTFLHDKELHVGPRSAPPSVHGPAQGMSTNPQGLYVLTPFRCEGDGRLLLVNRG 186 D AGLLLFGGLV+GTG LG+WQ++RY+WKIDAI+ER+E LAKQPE L + PE++RRY V GTFLH EL VGPR+APPSVHGPAQG+ TNPQG Y+LTPF+ GDG + + RG Sbjct: 58 DLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQPEPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFQRAGDGYVQALTRG 171
BLAST of NO22G02050 vs. NCBI_GenBank
Match: XP_005855208.1 (surfeit locus 1, partial [Nannochloropsis gaditana CCMP526] >EKU21154.1 surfeit locus 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 164.9 bits (416), Expect = 4.800e-37 Identity = 77/106 (72.64%), Postives = 90/106 (84.91%), Query Frame = 0 Query: 72 DKAGLLLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNLPESHRRYHVRGTFLHDKELHVGPRSAPPSVHGPAQGMSTNPQGLYVLTPFRCEGDG 178 D AGLLLFGGLV+GTG LG+WQ++RY+WKIDAI+ER+E LAKQ E L + PE++RRY V GTFLH EL VGPR+APPSVHGPAQG+ TNPQG Y+LTPFR GDG Sbjct: 58 DLAGLLLFGGLVVGTGCLGVWQSERYFWKIDAIQERNECLAKQLEPLPDFPEAYRRYLVSGTFLHGLELSVGPRAAPPSVHGPAQGLGTNPQGFYILTPFRA-GDG 162
BLAST of NO22G02050 vs. NCBI_GenBank
Match: GBG25121.1 (Surfeit locus protein 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 116.7 bits (291), Expect = 1.500e-22 Identity = 84/284 (29.58%), Postives = 115/284 (40.49%), Query Frame = 0 Query: 72 DKAGLLLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNLPESHRRYHVRGTFLHDKELHVGPRSAPPSVHGPAQGMSTNPQGLYVLTPFRCEGDGRLLLVNRGWVP----LRSLSSLSRPPSTVSLVGVVEREGEKGGRFAPVNDFAVSAGEXXXXXXXXXXXXXXXXPLLWVDLPAIERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMTRR 352 D GL LFG L GT LG WQ +RY+WK+D ++ER ML + L + R GTF + + + VGPRSAP HG + P G YV+TPF + G+ +LVNRGW+P +L L + S GV+ + E+GG F P D + P + P +ER + P PKA D+ F V P TH+ YA TW+ L+ AG + R+ Sbjct: 8 DWLGLGLFGSLAAGTFGLGSWQVKRYFWKVDLVEERRRMLERDAVPLAEASRPYERVRCSGTFDYAQSMFVGPRSAP--AHGVQGTGAMQPSGWYVVTPFTDKDSGKRVLVNRGWIPRDQQQLALQGLEKGLDAESFDGVLAK-AEEGGTFTP--DKLSNESVEYFRMDVETMRAQRGLP---ENTPLVERVQTSPQ-------------------------------------------EATIMPRPKAPEDMMVFQVHPMTHVGYAATWYGLSAAGLFLIRK 240
BLAST of NO22G02050 vs. NCBI_GenBank
Match: GAX23035.1 (surfeit locus 1 family protein [Fistulifera solaris]) HSP 1 Score: 110.9 bits (276), Expect = 8.200e-21 Identity = 87/303 (28.71%), Postives = 117/303 (38.61%), Query Frame = 0 Query: 73 KAGLLLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNLPESHR------RYHVRGTFLHDKELHVGPRSAPP-SVHGPAQGMSTNPQGLYVLTPFRCEGDGRLLLVNRGWV--------------PLRSLSSLSRPPSTVSLVGVVEREGEKGGRFAPVNDFAVSAGEXXXXXXXXXXXXXXXXPLLWVDLPAIERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMTRRILR 355 KAG + FGGL +GT LG WQ QRY+ KI ++ER L K P + NL E + + ++G + H E VGPR PP ++ A G+S+ PQG +V+TPF + G ++VNRGWV P L RP + LV V R +DF L W D A++ S P+ V VG F V P+ H+ YA TW+ L+ AG MTR +LR Sbjct: 359 KAGQVFFGGLCVGTFGLGTWQTQRYFEKIRLMEERQNDLQKAPTTTFNLQEIQQQTNNFCQLQLQGRYDHRHEFLVGPRGPPPGALPDTAGGISSAPQGYFVMTPFILKKSGETVIVNRGWVPRAMVVPDRRQSNAPRNDLLQWDRPDTVTDLVVVPARAETPKSLLVAQHDFQAQPPR-----------------LFWYDQVAMQ-----------------------------AAAGLPLQPPSLMVTAIQPKDQPSSLPLRPPVEHVGDFKVTPAIHVGYAATWYGLSLAGVYMTRMLLR 615
BLAST of NO22G02050 vs. NCBI_GenBank
Match: CBJ27729.1 (SURF1/SHY1 homolog, cytochrome c oxidase assembly protein [Ectocarpus siliculosus]) HSP 1 Score: 110.2 bits (274), Expect = 1.400e-20 Identity = 91/323 (28.17%), Postives = 125/323 (38.70%), Query Frame = 0 Query: 75 GLLLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNLPE--------------------------------------------SHRRYHVRGTFLHDKELHVGPRSAPP---SVHGPAQGMSTNPQGLYVLTPFRCEGDGRLLLVNRGWVPLRSLSSLSRPPSTVSLVGVVEREGEKGGRFAPVNDFAVSAGEXXXXXXXXXXXXXXXXPLLWVDLPA-IERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMT 350 G+++F LV T LG WQA RY WK+D I+ R + +P +LPE RR V G F H KE+ VGPR APP + GP+ M+ +P G +V TP + GDG ++LVNRGWVP SRP V++VGV+ + EK F+P N LLW + A ++ +G+ G + P+ K G FYV P THL+Y+ TW++LA AG +T Sbjct: 87 GIVVFSSLVGATACLGTWQAMRYSWKLDLIESRKARMEFEP---VDLPEGLEGATLATMMDVLDKEADGKASKGPNGETLGGSEEGKGLLESLEGRRLRVTGVFDHGKEVLVGPRGAPPGMKATSGPS-SMAPSPMGDFVHTPLK-RGDGSVVLVNRGWVPRSKGPQWSRPEGEVTMVGVL-KAAEKRSTFSPDN-------------------KPETRHLLWAEKAALLQAAGLGQHGAEEGVQSVPILM----------------------EAVGEEDGDKKTMPMAKKPKHFGDFYVTPQTHLMYSATWYALAAAGCALT 362
BLAST of NO22G02050 vs. NCBI_GenBank
Match: XP_005793187.1 (SURF1-like protein [Emiliania huxleyi CCMP1516] >EOD40758.1 SURF1-like protein [Emiliania huxleyi CCMP1516]) HSP 1 Score: 109.0 bits (271), Expect = 3.100e-20 Identity = 88/293 (30.03%), Postives = 118/293 (40.27%), Query Frame = 0 Query: 79 FGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNL------------PESHRRYHVRGTFLHDKELHVGPRSAPPSVHGPAQGMSTNP-----QGLYVLTPFRCEGDGRLLLVNRGWVPLRSLSSLSRPPSTVSLVGVVEREGEKGGRFAPVNDFAVSAGEXXXXXXXXXXXXXXXXPLLWVDLPAIERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMTRRILR 355 F G+ GT L WQ QR WK+ + ER L PE L + RR RGTF H ++L +GPRSAP V G P G V+TP RC DG +LVNRGWVP + +S+P + + GV+ R GE G RF ND A P++ + P+ +R G G WP+ + ++ +F+V+P THLVY+ TW SL+G A+MT LR Sbjct: 20 FSGVAAGTAGLSYWQLQRRQWKLALVSEREATLHAAPEPLAAVVPAAARADGVAPKHEFRRVECRGTFDHRQQLLMGPRSAPAGVDAAPPGAKPPPGGAGMTGWDVITPLRCT-DGGAVLVNRGWVPRDQVDQVSQPVGELCVDGVL-RCGEAGNRFT-TNDAA--QRRFVYLDAEAMADATGSSPVVLYETPS-QRPSPGGGG----------------------------------------------WPLQRPLSSFLEFHVKPETHLVYSATWASLSGLMALMTAIRLR 260
BLAST of NO22G02050 vs. NCBI_GenBank
Match: XP_005793539.1 (hypothetical protein EMIHUDRAFT_372726 [Emiliania huxleyi CCMP1516] >EOD41110.1 hypothetical protein EMIHUDRAFT_372726 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 109.0 bits (271), Expect = 3.100e-20 Identity = 88/293 (30.03%), Postives = 118/293 (40.27%), Query Frame = 0 Query: 79 FGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNL------------PESHRRYHVRGTFLHDKELHVGPRSAPPSVHGPAQGMSTNP-----QGLYVLTPFRCEGDGRLLLVNRGWVPLRSLSSLSRPPSTVSLVGVVEREGEKGGRFAPVNDFAVSAGEXXXXXXXXXXXXXXXXPLLWVDLPAIERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMTRRILR 355 F G+ GT L WQ QR WK+ + ER L PE L + RR RGTF H ++L +GPRSAP V G P G V+TP RC DG +LVNRGWVP + +S+P + + GV+ R GE G RF ND A P++ + P+ +R G G WP+ + ++ +F+V+P THLVY+ TW SL+G A+MT LR Sbjct: 20 FSGVAAGTAGLSYWQLQRRQWKLALVSERKATLHAAPEPLAAVVPAAARADGVAPKHEFRRVECRGTFDHRQQLLMGPRSAPAGVDAAPPGAKPPPGGAGMTGWDVITPLRCT-DGGAVLVNRGWVPRDQVDQVSQPVGELCVDGVL-RCGEAGNRFT-TNDAA--QRRFVYLDAEAMADATGSSPVVLYETPS-QRPSPGGGG----------------------------------------------WPLQRPLSSFLEFHVKPETHLVYSATWASLSGLMALMTAIRLR 260
BLAST of NO22G02050 vs. NCBI_GenBank
Match: GAX23350.1 (surfeit locus 1 family protein [Fistulifera solaris]) HSP 1 Score: 106.7 bits (265), Expect = 1.500e-19 Identity = 88/307 (28.66%), Postives = 117/307 (38.11%), Query Frame = 0 Query: 73 KAGLLLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNLPESHR------RYHVRGTFLHDKELHVGPRSAPPSV---HGPAQGMSTNPQGLYVLTPFRCEGDGRLLLVNRGWVP--------LRSLSSLS--------RPPSTVSLVGVVEREGEKGGRFAPVNDFAVSAGEXXXXXXXXXXXXXXXXPLLWVDLPAIERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMTRRILR 355 KAG + FGGL +GT LG WQ QRY+ KI ++ER L K P N+ E + + ++G + H E VGPR PP G+S+ PQG +V+TPF + G +LVNRGWVP +S S+ S RP + LV V R +DF L W D A++ S P+ V VG F V P+ H+ YA TW+ L+ AG MTR +LR Sbjct: 9 KAGQVFFGGLCVGTFGLGTWQTQRYFEKIRLMEERQSDLQKAPTETFNIQEIQQQTNNFCQLQLQGRYDHRHEFLVGPRGPPPGALPDTAGGGGISSAPQGYFVMTPFILKKTGETVLVNRGWVPRAMVVPDRRQSSSNASRSDLLQWDRPDTVTDLVVVPARAETPKSLLVAQHDFQAQPPR-----------------LFWYDQVAMQ------------------------------AAAGLPLQPPSLIVTAIQNKNQSSLPLRPPVEHVGDFKVTPAIHVGYAATWYGLSLAGVYMTRMLLR 268
BLAST of NO22G02050 vs. NCBI_GenBank
Match: XP_005712940.1 (unnamed protein product [Chondrus crispus] >CDF33137.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 105.1 bits (261), Expect = 4.500e-19 Identity = 87/289 (30.10%), Postives = 114/289 (39.45%), Query Frame = 0 Query: 77 LLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNL-----PESHRRYHVRGTFLHDKELHVGPRSAPPSVHGPAQGMSTNPQGLYVLTPFRCEGDGRLLLVNRGWVPLRSLSSLSRPPSTVSLVGVVEREGEKGGRFAPVNDFAVSA-GEXXXXXXXXXXXXXXXXPLLWVD-LPAIERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMTRRILRPKIR 359 L FG + T SLG+WQ +R KI IKER L+ P + +L HRR V G FLHD E+ VGPRSAP + P GL ++TP E DG+++LVNRGWVP R + R + VS + R P D+ A G+ D PA W Y WP P++ D+ +F PSTH+ YA TWF L+ A A++TR R + R Sbjct: 54 LFFGVPIAVTFSLGVWQVRRLNRKIRLIKERENHLSAPPLAAADLFTASSDLDHRRVQVSGRFLHDAEITVGPRSAPKDLPSPVLQWG-GSSGLQIITPMEME-DGKVILVNRGWVPQRLAQAPKRRHAVVSPHPFLTRVDSS----TPTCDYEDGATGKSSLKTFTAVVRGCDEKNRFTPDNQPAKGEW------------------YYIDPDAILHAHELCDGDTRAVVVELLEPLPRGGWPHPRSYNDLLEFRTPPSTHVTYATTWFCLSAALALLTRNRFRQRGR 318
BLAST of NO22G02050 vs. NCBI_GenBank
Match: KOO22377.1 (surf-family protein shy1 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 100.1 bits (248), Expect = 1.400e-17 Identity = 84/298 (28.19%), Postives = 128/298 (42.95%), Query Frame = 0 Query: 69 TTKDKAGLLLFGGLVIGTGSLGMWQAQRYYWKIDAIKERSEMLAKQPESLTNL-PE---------SHRRYHVRGTFLHDKELHVGPRSAPP-SVHGPAQGMSTNPQGLYVLTPFRCEGDGRLLLVNRGWVPLRSLSSLSRPPSTVSLVGVVEREGEKGGRFAPVNDFAVSAGEXXXXXXXXXXXXXXXXPLLWVDLPAIERWLMGEEGEXXXXXXXXXXQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSWPVPKAVTDVGQFYVQPSTHLVYALTWFSLAGAGAIMT-RRILR 355 TT + G LF GL T L WQ +RY K+ +++R L P L + PE + R V GTF H +++ +GPRSAPP S G + + G V+TP C DG +LVNRGWVP + +++ +P + GV+ ++G++ ++ ND A AG +W+DL ++ R +WP + ++ + FYV+P TH+VYA TW SL AGA++T +R +R Sbjct: 40 TTLRRLGAALFSGLCGTTACLCGWQVKRYGDKVQMVEDRKTALQAAPRPLREVYPELSAGISAGDEYTRVSVEGTFDHARQVLLGPRSAPPGSDKGNSPAGAPAQSGWDVVTPLAC-ADGSRVLVNRGWVPRDATAAIDQPTGQQRIEGVL-KQGDRENKYGH-NDPA--AGR-----------------YVWLDLASLAR-----------------------SSGSSPILVMAAAEGSDASDGRAASSVHRTWPRVRPLSSLMSFYVEPHTHIVYAATWASLTVAGAVITVKRFVR 292 The following BLAST results are available for this feature:
BLAST of NO22G02050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G02050 ID=NO22G02050|Name=NO22G02050|organism=Nannochloropsis oceanica|type=gene|length=2100bpback to top protein sequence of NO22G02050.1 >NO22G02050.1-protein ID=NO22G02050.1-protein|Name=NO22G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=361bpback to top Synonyms
Publications
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