NO22G02040, NO22G02040 (gene) Nannochloropsis oceanica

Overview
NameNO22G02040
Unique NameNO22G02040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3125
Alignment locationchr22:630707..633831 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:630707..633831 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G02040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR104ngnoR104Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G02040.1NO22G02040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G02040.1NO22G02040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G02040 ID=NO22G02040|Name=NO22G02040|organism=Nannochloropsis oceanica|type=gene|length=3125bp
TCCTCATTATTTATTTATTAGTTCATTCATTTGTTTATTTGTTGTTGTTT
TTTTTAAATGAAGGAAAGAGACATTCCATGTGATCCTGCCTTGTGAAGCT
GTCGACGCGAGCATTAAATTATTACTTTTCATCCGTCACCTGTCCATGAG
TAAGTGGTAGTGGGCGTAGAAAGCACAAGAGGCAGATGACAAGGAGAAAA
TAAATAAACGGGTAAGTTTTGGTGTGCTCGTACGAATAATAACGTGCAAA
GACCGTCTTCATACTCACTCGTTTAAGCTTGGTGCTTGCGGTGACCTCCA
TCTCTCCTAAAGTTCGGCCTAGGGCTTTCTTTCCCACCCGCCTCCTCATC
CATACGTCTCATCCTCCTGCGTACCAAAAAAGGGACGGATGGCAATGGAG
CGAATGACGGGTAAAGCACGATTTTGAACGCTTGTAGATTATGGAATAAC
ATATGGATACCTTCATTGATTTGTGGGTCAGTGCTTTTCTTTCTTGTTGA
ATTTGGCATGTGTATCCGTGAGGGTAGACGAAGGCCTGTGCCAACCCTCC
CGAATGGCGTCAGCCCCAGCACAACCACCGCTTTGATCCACCCCTTATGC
TGTGCCTCCTCTTTTTTGCCTGCTTTTACTTCTCTCCTTCTCAGGAGGGA
ATAACCAAGTTCTAGGAAATTAAGTTTATACAGAGCGAAACCACCTTGAT
GTCAAGGTGAGCTTGGATCATTCATCACCTATCTCCTCTCGCTCTGCAAT
TGCAGGAACAAGAACATTTCAAAGATATAGCTGCATGATGGAAGTCCGAA
CTGGTATCCACCAACAGGTGCCGGCAAATACAATGCAGAAAACACGCATT
CAACGAGAAGGTGCATGCCCATAATTATAGTTCCTGACGTACGCGCCAGT
GTCCATCGGTAGGACATTTGAGTCACGGCGTCTGGTCTCCTCAGAGGCTC
GCCTCAAGTTGATGCCATTAGATGTTCTCCGCGAGGGGCGCGCGCCTTAG
TCAGAAGGCAAGTACGAGTGAACACAGGAGGTTTTTCCCGATTCACTTTT
GGATATACCTTCAAGCTGACCCTATCGCACCACATGTACGCTGCGTGGGT
GAAAACAAGGGTACAAAAGGCGTGCAAAGGGGATGCTTGAAGCCACAGCC
AGTGTTTTATTCTTCCTCGAGTTGTTCCGCTCTGCGTCAGGACGTCGTAC
GCATGCGTGCTTCAACCCTCGCTTGTTCCGCCACTCTTGACGGATGCCTT
GATGCCTCTCTTCTTCTGCATTGCCATGTGCTGCCCTTTGTTTGCTTTGA
CACATACGCACCAACACAAAAGTCCAAATACACGGAAATTGAAAGTTGCA
TCAAATGAGCGTCGCGCGTCTCCGCTTGGTGGAATGCGGCGTTTGTGGTT
CTCGGCCTTGGTTCTATCTTTGACACGACGCGGGAACGCGAGGGGGCGCG
AGCCTGAATGGCGACGGCCCCGCACACACGTACACGGCTGTGACGACCCG
CCCGCAAACCACCACCTTCACACCTGCGCGCTTTCACCCACTTACTCATA
TTCTATGTATCCTCTCACTCCCACTTCGCTCTTCCGCACAGGCAAATTTT
CGTCATCAGAGGCCCACGCACAAACCACGAGGAGTCATCACCCGACCGAC
GACGAAGCGAAGAGTAGGCTTAGTCACCATGACAGCATCAAGTCGCCCGC
TTGTCGCCTCCCCCTCCACCAGCACCACCGAAGCACCCTGCCTGGCCCCA
AAACAAGTCGATGACATTCTAGCCGAGTTCTTTATGCGTGTCCAGGTGGA
CCCCGACCACTTGCCCTCTTTGGCTGCCGGCACGCCCCTCGGCCTGCCTC
CCCTGGGACCGACGAAGCAGTCACATCAAAGCAGCGTCGCTCCCACCACT
AGCAGTGCCCGACACAGCGGCAGACAGCAGCACCTGCACCAGAATCGACA
ATGCCAGCAGCTGCAAGGTTGTTTGAGCGTGCGCAGgtatgtaaaactcc
tattctttcgacccggaagacaggagttgaagagtctcatctttgcccgc
ccatatggggcgtgtgcgtcagttcaaccagcgcagcagggggtgctgaa
ccaggccctccaccttctgcctccctttaattgtatatctggcagtatta
agcatgtgttatcttgaccaatctgtcttgacgtcgcggttgtgcatcat
gcggatacgtccttcaacctcctcactctaccctccctccctccctcccc
ccttgcactccttccctcctgtctgacgtactcccagGCCATGCACTCCC
CCCCATCGCCCTCTGAAAAAGAAGACCGTGAAAAGAAGCACCATAAGCAA
CGGTATCAGCAGCACCAGCAGCCGCATGAGTAGCCCCGCCTTGCTCCGGC
GCTTCCCCTCTTCCTCTTCCCAGCATCAGCACCAGCACCAGCAGACTCCT
ATCCGCCGCCGCCTCTTTCTTGTCGAGGACGATAAAGAGAATGCATCCCC
GTCTTCCCTATCTTCCTCGTCTCAGTCTCAGTAGGGAAGGAGGGAGGGAG
GGCGGGCTCTAGAGTGGCCATCTCGCGAGGCGCATGTACAGGTGCTGTGA
TGTATTCCCACCCGAAAGTTTTCCTCTTTCACTCGTATTCTTCACATTGA
AGAAGAAAAGGCCCAAGCTCAAAGTTTGTATTTAGATTTTTAATTTTTGA
TAAATTGGATGTAGTAGATAGTCTCTTTCAGGAGAAATCGGAAGTAATGT
GTCCACTCCTCCCTCATCATCATCTCTTTTTCTAATTAGAAGAGAAAGAA
GGAGAGTGGGAAGAAAAGAGAGACACGAGTGTAGGAATGAGTAGACGGGG
CTCTGCCGGTAATGATTGGCGTGTGTGTCCGTGGGTCATGAAACCACTGT
CCTGGCCCTGACGGCGATAGATGACCTTTTTTTTTAATTTTATTGATTCA
TTTTGAAGTCAGGAAGGAACAGCACAGATTGCCAGAAAGCTGCAGCAGAA
ATGGCAGCAAGAGCAGTAGCAGTATCAACAACAGAAGTACGCAGACATGC
CACCAAAATACAACGAGCAGTGACATAATGACCAGAAGTTCAAAGGGGGG
AGAGGGAGGGAGGGAGGGAGGGATT
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protein sequence of NO22G02040.1

>NO22G02040.1-protein ID=NO22G02040.1-protein|Name=NO22G02040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=185bp
MTASSRPLVASPSTSTTEAPCLAPKQVDDILAEFFMRVQVDPDHLPSLAA
GTPLGLPPLGPTKQSHQSSVAPTTSSARHSGRQQHLHQNRQCQQLQGCLS
VRRPCTPPHRPLKKKTVKRSTISNGISSTSSRMSSPALLRRFPSSSSQHQ
HQHQQTPIRRRLFLVEDDKENASPSSLSSSSQSQ*
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Synonyms
Publications