NO22G01960, NO22G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01960 vs. NCBI_GenBank
Match: CBJ49211.1 (autophagy-related protein 5 [Ectocarpus siliculosus]) HSP 1 Score: 105.1 bits (261), Expect = 4.800e-19 Identity = 73/207 (35.27%), Postives = 95/207 (45.89%), Query Frame = 0 Query: 30 WSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSD 237 W IP EL+M SEV + PLP Y LLPR+G+LP A FG E P +Q+++W GE PL+WH+P GVL+DL R G LPWRI V FQ P+ QV FP + +++H+ LKQA LQ G S M LAKE++ LW+A+ S+D Sbjct: 153 WGGMIPTELSMDSSEVTSLQRPLPLYLLLPRMGFLPCVAEAISHHFG----EVAPDAQRTLW---------LEETRSGE----PLRWHVPTGVLFDLIAGVGQEEGGGAKHGEEVPWSGPGRLG--LLPWRITVHFQGCPRRQV----FPLEKEAD---------IRRHYTNALKQALFLQSGSSRAGMTLAKENQNRLWQAIKSND 327
BLAST of NO22G01960 vs. NCBI_GenBank
Match: GAQ86304.1 (autophagy protein 5 [Klebsormidium nitens]) HSP 1 Score: 103.2 bits (256), Expect = 1.800e-18 Identity = 78/285 (27.37%), Postives = 118/285 (41.40%), Query Frame = 0 Query: 26 QSTLWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKL---IASRPQRLPLRLHI---GRDPALL-----XXXXXXXXXXXXXXXXXXLGQALRLAVPHLF 300 Q +W P+ + ++ EV ++ P P + + PRLGYLPL A F A PP ++W E R +PLKWH+P GVLYDL + LPW++ V F+ P + + P + V+ + LK+A ++ HG + P M L+++D+ LW ++A DF+R+ L +SRP+ +PLRL++ G A + LG AL AVPHLF Sbjct: 17 QKVVWEGNFPLRIQLEAKEVTTLTPPPPLFLMAPRLGYLPLLASKIEPHF----RAALPPGTDAIWF---------------EYRGLPLKWHIPTGVLYDLLAE------------------------EKTLPWQLTVHFRTYPSELI---PIEGEET-----------VKWSYMNALKEAVYIMHGSTKPVMSLSQKDQEELWRSLAEGDFNRHTSSAASLGVSTSSRPRSVPLRLYLRQAGTSGAHVKKWEEIAVTTRCADVMDSGSPATLGGALHKAVPHLF 244
BLAST of NO22G01960 vs. NCBI_GenBank
Match: XP_024574422.1 (hypothetical protein F442_18406 [Plasmopara halstedii] >CEG38053.1 hypothetical protein F442_18406 [Plasmopara halstedii]) HSP 1 Score: 95.5 bits (236), Expect = 3.800e-16 Identity = 66/245 (26.94%), Postives = 102/245 (41.63%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKL------IASRPQRLPLRLHIGRDPAL 268 +W IP+ T+ +EV + P PFYA++PR+ YL D I A S+W E + +PL WHLP G+L D LPW I V F + P+D++L P SS ++ HF LKQA+ L+ G + MGL + + +W ++ ++D+ Y+ +L S + LPLR+H+G +PA+ Sbjct: 17 VWDGRIPVVFTLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVIEYLRDSAPPISIMQGASIWF---------------EAKGVPLHWHLPFGLLRDTL------------------CGPSADSDANDLPWAITVHFLNFPRDKLL----PCENESS---------IESHFMHSLKQATFLRMGSTKAVMGLPEAQQTQIWTSITNNDYESYRQATHELHLDGGENVSALRLLPLRVHLGTEPAI 215
BLAST of NO22G01960 vs. NCBI_GenBank
Match: XP_002905836.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67188.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 95.1 bits (235), Expect = 4.900e-16 Identity = 66/245 (26.94%), Postives = 103/245 (42.04%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKL------IASRPQRLPLRLHIGRDPAL 268 +W+ IP+ ++ +EV + P PFYA++PR+ YL D + F A S+W E + PL WHLP G+L DL +G LPW I V F + P+D +L P S V+ HF LKQA+ L+ G + M L + + +W +++ +D+ Y+ ++L AS + LPLR+H+ PA+ Sbjct: 7 VWAGRIPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVDYFRDAAPPMSAIQGASIWF---------------EAKGAPLHWHLPFGLLRDLL-------------------CGPGVDGDADLPWAITVHFLNFPKDVLL----PCDNEQS---------VESHFMHSLKQATFLRMGSTKVVMALPEAQQTQIWTSISQNDYESYRQATYELHLDGGVDASALRHLPLRVHLDNAPAI 204
BLAST of NO22G01960 vs. NCBI_GenBank
Match: ETK75283.1 (hypothetical protein L915_18087 [Phytophthora parasitica]) HSP 1 Score: 93.2 bits (230), Expect = 1.900e-15 Identity = 64/245 (26.12%), Postives = 103/245 (42.04%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKL------IASRPQRLPLRLHIGRDPAL 268 +W+ +P+ ++ +EV + P PFYA++PR+ YL D + F A S+W E + +PL WHLP G+L DL + LPW I V F + P+D +L P S V+ HF LKQA+ L+ G + M L + + +W +++ +D+ Y+ ++L AS + LPLR+H+ PA+ Sbjct: 17 VWAGRLPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVEYFRDAAPPMSAIQGASIWF---------------EAKGVPLHWHLPFGLLRDLL-------------------CGPGVDSDTDLPWAITVHFLNFPKDILL----PCDNEQS---------VESHFMHSLKQATFLRMGSTKAVMALPEAQQTQIWTSISQNDYESYRQATYELHLDGGVDASALRHLPLRVHLDNAPAI 214
BLAST of NO22G01960 vs. NCBI_GenBank
Match: ETK75285.1 (hypothetical protein, variant 2 [Phytophthora parasitica] >ETP04840.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 93.2 bits (230), Expect = 1.900e-15 Identity = 64/245 (26.12%), Postives = 103/245 (42.04%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKL------IASRPQRLPLRLHIGRDPAL 268 +W+ +P+ ++ +EV + P PFYA++PR+ YL D + F A S+W E + +PL WHLP G+L DL + LPW I V F + P+D +L P S V+ HF LKQA+ L+ G + M L + + +W +++ +D+ Y+ ++L AS + LPLR+H+ PA+ Sbjct: 17 VWAGRLPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVEYFRDAAPPMSAIQGASIWF---------------EAKGVPLHWHLPFGLLRDLL-------------------CGPGVDSDTDLPWAITVHFLNFPKDILL----PCDNEQS---------VESHFMHSLKQATFLRMGSTKAVMALPEAQQTQIWTSISQNDYESYRQATYELHLDGGVDASALRHLPLRVHLDNAPAI 214
BLAST of NO22G01960 vs. NCBI_GenBank
Match: ETL28711.1 (hypothetical protein L916_17991 [Phytophthora parasitica] >ETP04838.1 hypothetical protein F441_18471 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 93.2 bits (230), Expect = 1.900e-15 Identity = 64/245 (26.12%), Postives = 103/245 (42.04%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKL------IASRPQRLPLRLHIGRDPAL 268 +W+ +P+ ++ +EV + P PFYA++PR+ YL D + F A S+W E + +PL WHLP G+L DL + LPW I V F + P+D +L P S V+ HF LKQA+ L+ G + M L + + +W +++ +D+ Y+ ++L AS + LPLR+H+ PA+ Sbjct: 17 VWAGRLPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVEYFRDAAPPMSAIQGASIWF---------------EAKGVPLHWHLPFGLLRDLL-------------------CGPGVDSDTDLPWAITVHFLNFPKDILL----PCDNEQS---------VESHFMHSLKQATFLRMGSTKAVMALPEAQQTQIWTSISQNDYESYRQATYELHLDGGVDASALRHLPLRVHLDNAPAI 214
BLAST of NO22G01960 vs. NCBI_GenBank
Match: ETL28713.1 (hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 93.2 bits (230), Expect = 1.900e-15 Identity = 64/245 (26.12%), Postives = 103/245 (42.04%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKSVWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKL------IASRPQRLPLRLHIGRDPAL 268 +W+ +P+ ++ +EV + P PFYA++PR+ YL D + F A S+W E + +PL WHLP G+L DL + LPW I V F + P+D +L P S V+ HF LKQA+ L+ G + M L + + +W +++ +D+ Y+ ++L AS + LPLR+H+ PA+ Sbjct: 17 VWAGRLPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVEYFRDAAPPMSAIQGASIWF---------------EAKGVPLHWHLPFGLLRDLL-------------------CGPGVDSDTDLPWAITVHFLNFPKDILL----PCDNEQS---------VESHFMHSLKQATFLRMGSTKAVMALPEAQQTQIWTSISQNDYESYRQATYELHLDGGVDASALRHLPLRVHLDNAPAI 214
BLAST of NO22G01960 vs. NCBI_GenBank
Match: XP_009842905.1 (hypothetical protein H257_16238 [Aphanomyces astaci] >ETV67647.1 hypothetical protein H257_16238 [Aphanomyces astaci]) HSP 1 Score: 92.4 bits (228), Expect = 3.200e-15 Identity = 70/243 (28.81%), Postives = 104/243 (42.80%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKS--VWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKLI-ASRPQR-LPLRLHIGRDPAL 268 LW +P+ ++ SE+ + P P+YA++PR+ L AA DA++ A SQ S VW E + +PLKWHLP GVLYDL G LPW + V FQ P +L P + AV+ HF KQ+ L +G + M L ++ LWE +DFS ++ L+ +S P+R +PLR+ + +P + Sbjct: 10 LWEGHVPVCFSIDASEITTLQVPRPYYAMVPRVSSLMCAATDAVINHFKDVAPPMLSSQLSRYVWF---------------EFKGLPLKWHLPFGVLYDL-------------------------HGDDMLPWEVTVHFQGYPSQHLL-------PCDNLQ------AVEMHFMNSYKQSMFLLYGSTKWIMNLPQQKHTQLWEGHVKNDFSMFESVHATLVPSSEPKRHVPLRVLLPHEPTI 199
BLAST of NO22G01960 vs. NCBI_GenBank
Match: XP_009842904.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV67648.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 92.4 bits (228), Expect = 3.200e-15 Identity = 70/243 (28.81%), Postives = 104/243 (42.80%), Query Frame = 0 Query: 29 LWSSAIPIELTMKESEVAGISTPLPFYALLPRLGYLPLAALDAIVLFGGIAAEAGPPSQKS--VWXXXXXXXXXXXXXXXGEMRWMPLKWHLPGGVLYDLFKRGXXXXXXXXXXXXXXXXXXXXREGGQKLPWRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASHLQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKLI-ASRPQR-LPLRLHIGRDPAL 268 LW +P+ ++ SE+ + P P+YA++PR+ L AA DA++ A SQ S VW E + +PLKWHLP GVLYDL G LPW + V FQ P +L P + AV+ HF KQ+ L +G + M L ++ LWE +DFS ++ L+ +S P+R +PLR+ + +P + Sbjct: 10 LWEGHVPVCFSIDASEITTLQVPRPYYAMVPRVSSLMCAATDAVINHFKDVAPPMLSSQLSRYVWF---------------EFKGLPLKWHLPFGVLYDL-------------------------HGDDMLPWEVTVHFQGYPSQHLL-------PCDNLQ------AVEMHFMNSYKQSMFLLYGSTKWIMNLPQQKHTQLWEGHVKNDFSMFESVHATLVPSSEPKRHVPLRVLLPHEPTI 199 The following BLAST results are available for this feature:
BLAST of NO22G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01960 ID=NO22G01960|Name=NO22G01960|organism=Nannochloropsis oceanica|type=gene|length=2605bpback to top protein sequence of NO22G01960.1 >NO22G01960.1-protein ID=NO22G01960.1-protein|Name=NO22G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bpback to top Synonyms
Publications
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