NO22G01880, NO22G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01880 vs. NCBI_GenBank
Match: EWM20402.1 (proteasome subunit beta type-2 [Nannochloropsis gaditana]) HSP 1 Score: 248.8 bits (634), Expect = 1.700e-62 Identity = 136/215 (63.26%), Postives = 154/215 (71.63%), Query Frame = 0 Query: 20 PFLLLFLLP---HATLGQLDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLEYEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENE--------EAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYHQLEVEGGKGGG 224 P+LLL L + QLDTL+GLQG DFVLLAADPVLSRSL LLH+HHDKLP LG HHCLALGGP YFTEI+SEVLGAEKRLFEKRLRRPL+T AVA MARNLFLEY+GLPVR++VAGWE+ G + E GR + + ++ GRP L+WLDSLGA+ LPYAAHGEA+ FL LDQQYHQLE E GK GG Sbjct: 41 PWLLLLTLALHLPFLVAQLDTLIGLQGEDFVLLAADPVLSRSLTLLHSHHDKLPLLGSHHCLALGGPVYFTEIISEVLGAEKRLFEKRLRRPLSTRAVAAMARNLFLEYKGLPVRMLVAGWEEVGTGTGAMMEEEGGPTWEXXXXXXXXXXGRNGAEGKREGRQKMGRPSLYWLDSLGALQKLPYAAHGEASVFLTGLLDQQYHQLEDEEGKRGG 255
BLAST of NO22G01880 vs. NCBI_GenBank
Match: CBN79826.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11 Identity = 57/179 (31.84%), Postives = 82/179 (45.81%), Query Frame = 0 Query: 35 LDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLE--YEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQY 212 +DTLLG+ G FV+LAAD ++RS+LL + DK+ L + LA GP +E + L+E LTT A A R + +G ++ G D+ REAG+DE LFWLD LG + +PY AHG AF ++ +D++Y Sbjct: 1 MDTLLGIAGEGFVVLAADAQVARSILLYKNNMDKIAHLADNKALACAGPQSDCVSFTEYISKNMALYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDK--------------------REAGKDEAS---------LFWLDYLGTLQKVPYGAHGYGAAFTLSVMDREY 150
BLAST of NO22G01880 vs. NCBI_GenBank
Match: XP_005855244.1 (proteasome component c11, partial [Nannochloropsis gaditana CCMP526] >EKU21116.1 proteasome component c11, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 79.0 bits (193), Expect = 2.400e-11 Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0 Query: 160 GREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYHQLEVEGGKGGG 224 GR + + ++ GRP L+WLDSLGA+ LPYAAHGEA+ FL LDQQYHQLE E GK GG Sbjct: 34 GRNGAEGKREGRQKMGRPSLYWLDSLGALQKLPYAAHGEASVFLTGLLDQQYHQLEDEEGKRGG 97
BLAST of NO22G01880 vs. NCBI_GenBank
Match: XP_009492847.1 (20S proteasome subunit beta 4 [Fonticula alba] >KCV73146.1 20S proteasome subunit beta 4 [Fonticula alba]) HSP 1 Score: 77.4 bits (189), Expect = 6.900e-11 Identity = 51/181 (28.18%), Postives = 80/181 (44.20%), Query Frame = 0 Query: 35 LDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLE----YEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQY 212 ++TL+ L G+D+VL A+D +RS+L+ + DK L PH +A G + T +E + RL+ R L+ A AN R E V V++AG+++ G P L+WLD LG + +P+ AHG A+ F+++ LD Y Sbjct: 1 METLISLTGKDYVLTASDMTAARSILVFKVNEDKTRDLSPHITMAFCGESGDTVQFAEFIQKNIRLYAIRNNFELSPKAAANYVRTQLAESLRSRSPYAVNVLIAGFDEHEG----------------------------------PELYWLDYLGTLCKIPFGAHGFASNFVLSTLDNAY 147
BLAST of NO22G01880 vs. NCBI_GenBank
Match: KGO76081.1 (Proteasome B-type subunit [Penicillium italicum]) HSP 1 Score: 75.5 bits (184), Expect = 2.600e-10 Identity = 66/208 (31.73%), Postives = 93/208 (44.71%), Query Frame = 0 Query: 6 SSRRRLQPLSFLLLPFLLLFLLPHATLGQLDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLEYEGLPVRVMVAGWEDEGGKEDQDL-SRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYH 213 SS P S L++ +LL F L ++ LLG+ G+DFV+LAA R +L DK L H +A G + T +E + A L+ R L+ AVAN R G+ + L SRS N G G D E +P L+W+D L +++PLPYAAHG A + +A LD+ +H Sbjct: 49 SSFNHYSPSSSLII-YLLAFFLFITHTANMEVLLGIAGKDFVILAASKAAMRGPTVLKAEDDKTRQLNKHTLMAFSGESGDTVQFAEYIQANAALYSMRNDTELSPSAVANFVR----------------------GELARSLRSRSPYTVNLLLG---GIDPVTE-----KPHLYWVDYLASLAPLPYAAHGYAQYYCLAILDKHHH 225
BLAST of NO22G01880 vs. NCBI_GenBank
Match: CBJ29372.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 74.7 bits (182), Expect = 4.500e-10 Identity = 57/204 (27.94%), Postives = 91/204 (44.61%), Query Frame = 0 Query: 17 LLLPFLLLF--LLPHATLGQLDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVA-----NMARNLFLEYEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYHQ 214 +LL LLF L+ ++TL+G++GRDFVLL D RS++++ T + K+ L + +A G E+ E L +L + RP+ +A N+A L + G V ++ GW NE A +P LFWLD+LGA+ + + AHG A+ F ++ LD + + Sbjct: 8 ILLQLALLFSSLISAVWASDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGW------------------NEVA---------------WQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFRE 178
BLAST of NO22G01880 vs. NCBI_GenBank
Match: CZS99698.1 (probable multicatalytic endopeptidase complex chain PRE1 [Rhynchosporium commune]) HSP 1 Score: 74.3 bits (181), Expect = 5.800e-10 Identity = 61/200 (30.50%), Postives = 85/200 (42.50%), Query Frame = 0 Query: 21 FLLLFLLPHATLGQLDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLEYEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYH-QLEVEGG 220 +L L L H +++ LLG+ G+DF L+A R +L DK PL H +A G A T +E + A +L+ R L+ AVAN R G SR N G G + RP L+WLD L +++PLPYAAHG A + + LD+ +H +E E G Sbjct: 11 YLRLQLNNHNNAIKMEVLLGITGKDFTLIACSKAAMRGATVLKASDDKTRPLNKHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNGIDLSPSAVANFVR---------------------GELASSLRSRKPYNVNLLLG--------GVDPITSRPSLYWLDYLASLAPLPYAAHGYAQYYCSSILDKHHHPDIEYEAG 181
BLAST of NO22G01880 vs. NCBI_GenBank
Match: OQO09045.1 (putative proteasome subunit beta type-4 [Rachicladosporium antarcticum]) HSP 1 Score: 74.3 bits (181), Expect = 5.800e-10 Identity = 52/185 (28.11%), Postives = 84/185 (45.41%), Query Frame = 0 Query: 28 PHATLGQLDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLEYEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYH 213 PH T + LLG+ G+DF ++AA R +L T+ DK L H +AL G A T +E + A +L+ KR L+ ++ R +L++S + N + E++ +P+LFW+D L + +PLPYAAHG A + ++ LD+ +H Sbjct: 16 PHNTAKMGEVLLGITGKDFTIIAASKAAMRGASILKTNDDKTKTLNKHTLMALVGEAGDTIQFAEYVQANIQLYSKRNASELSPSETSSFIRT--------------------------ELAKSLRSRNPYTVNLLLGGFDAETQ---KPQLFWIDYLASCAPLPYAAHGYAQYYCLSILDKHHH 171
BLAST of NO22G01880 vs. NCBI_GenBank
Match: OQO26090.1 (putative proteasome subunit beta type-4 [Rachicladosporium sp. CCFEE 5018]) HSP 1 Score: 74.3 bits (181), Expect = 5.800e-10 Identity = 52/185 (28.11%), Postives = 84/185 (45.41%), Query Frame = 0 Query: 28 PHATLGQLDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLEYEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYH 213 PH T + LLG+ G+DF ++AA R +L T+ DK L H +AL G A T +E + A +L+ KR L+ ++ R +L++S + N + E++ +P+LFW+D L + +PLPYAAHG A + ++ LD+ +H Sbjct: 16 PHNTAKMGEVLLGITGKDFTIIAASKAAMRGASILKTNDDKTKTLNKHTLMALVGEAGDTIQFAEYVQANIQLYSKRNASELSPSETSSFIRT--------------------------ELAKSLRSRNPYTVNLLLGGFDAETQ---KPQLFWIDYLASCAPLPYAAHGYAQYYCLSILDKHHH 171
BLAST of NO22G01880 vs. NCBI_GenBank
Match: CZT49608.1 (probable multicatalytic endopeptidase complex chain PRE1 [Rhynchosporium secalis]) HSP 1 Score: 73.6 bits (179), Expect = 9.900e-10 Identity = 58/186 (31.18%), Postives = 82/186 (44.09%), Query Frame = 0 Query: 35 LDTLLGLQGRDFVLLAADPVLSRSLLLLHTHHDKLPPLGPHHCLALGGPAYFTEIMSEVLGAEKRLFEKRLRRPLTTMAVANMARNLFLEYEGLPVRVMVAGWEDEGGKEDQDLSRSHAAENEEAGREAGQDEEGESRRSGRPRLFWLDSLGAVSPLPYAAHGEATAFLMAFLDQQYH-QLEVEGG 220 ++ LLG+ G+DF L+A R +L DK PL H +A G A T +E + A +L+ R L+ AVAN VR +A SR N G G + RP L+WLD L +++PLPYAAHG A + ++ LD+ +H +E E G Sbjct: 44 MEVLLGITGKDFTLIACSKAAMRGATVLKASDDKTRPLNKHTLMAFSGEAGDTIQFAEYIQANAQLYSMRNGIDLSPSAVANF------------VRAELA---------SSLRSRKPYNVNLLLG--------GVDPITSRPSLYWLDYLASLAPLPYAAHGYAQYYCLSILDKHHHPDIEYEAG 200 The following BLAST results are available for this feature:
BLAST of NO22G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01880 ID=NO22G01880|Name=NO22G01880|organism=Nannochloropsis oceanica|type=gene|length=900bpback to top protein sequence of NO22G01880.1 >NO22G01880.1-protein ID=NO22G01880.1-protein|Name=NO22G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bpback to top Synonyms
Publications
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