NO22G01870, NO22G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01870 vs. NCBI_GenBank
Match: EWM23326.1 (lipid transfer protein 5 [Nannochloropsis gaditana]) HSP 1 Score: 259.6 bits (662), Expect = 1.600e-65 Identity = 117/214 (54.67%), Postives = 159/214 (74.30%), Query Frame = 0 Query: 118 HVEAANEHLLEKVMSVMDETEAHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGLVPPFLVNKLCARGPVEFHNLVEKAAQRTRGQP 332 + ++ N+ +L +V+ +D+ EA GWE V+ +G+TVHRK +P+++G +SK+CC++ASG L AS ++ LF NTRV EYNK++AEGRDLE +N TKVVWA+SP +F FKPRD+CT VHYRK DGT++V+NR A HPEAP +DKYVRAE+LMGA+IIQPVP P+ VFT + ++PGG PP +VNK+ + GP F VE AA+ T P Sbjct: 420 YADSLNDKVLRRVLECLDQGEADGWELVSDAKGVTVHRKNLPSMDGRVSKYCCIKASGTLAASPDDILSLFADNTRVPEYNKFYAEGRDLEAINEHTKVVWAASPPMFFFKPRDFCTVVHYRKLQDGTVVVVNRGAEHPEAPRTDKYVRAEILMGANIIQPVPGKPHNAVFTIVTQVDPGGFAPPAIVNKVTSWGPPTFFREVEAAARTTHKIP 633
BLAST of NO22G01870 vs. NCBI_GenBank
Match: EWM20404.1 (START-like domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 245.4 bits (625), Expect = 3.200e-61 Identity = 150/194 (77.32%), Postives = 166/194 (85.57%), Query Frame = 0 Query: 17 CPLWHKALLISAFLLLPPQPFSILPAXXXXXXXXXXXXXXXXXXXXXXXXSTFPSSPNAGDKMRQAYQDLNKQRQDMLDNVKDRLNKAKEMAGAAFGTGEQHVEAANEHLLEKVMSVMDETEAHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHV 211 C W L++S+FLL+P QPF L + XXXXXXXXXXXXXXXXXXXXXXX P+ DKMR A++DL KQ+QDM+D V LNKAKEMAGAAFG E HVEAANEH+L +V+SVM+ETEAHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCL+VA+LFEGNTRVAEYNKYFAEGRDLEHV Sbjct: 28 CAPWRTCLVLSSFLLMPSQPF--LVSSXXXXXXXXXXXXXXXXXXXXXXXXXXPA-----DKMRHAFKDLKKQKQDMMDRVSGSLNKAKEMAGAAFGATEHHVEAANEHMLSRVLSVMNETEAHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLDVADLFEGNTRVAEYNKYFAEGRDLEHV 214
BLAST of NO22G01870 vs. NCBI_GenBank
Match: CBJ33383.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 188.0 bits (476), Expect = 6.000e-44 Identity = 106/253 (41.90%), Postives = 155/253 (61.26%), Query Frame = 0 Query: 84 QDLNKQRQDMLDNVKDRLNKAKEMAGA--AFGTGEQ---HVEAANEHLLEKVMS-VMDETEAHGWEHV--THRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCF-KPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGLVPPFLVNKLCARGPVEFHNLVEKAAQRT 328 + L +++QD+ + ++ +K MA F G++ ANE + + ++++TE GWE V T ++V RKF+ N SKF C+RA ++ +AE+ E + RV EYNK+F EGRDLE ++ TKVVWASSPS F KPRD+ T VH R+ DG+IIV+NR HPEAPPS +YVR EV++ A++I+P P N+ FT + ++PGG+ P ++VNK+ A PV+F VE AA R+ Sbjct: 286 EQLTRRQQDIAERMRAVTIDSKIMAKLYDEFLMGKKAKIDTSVANEDSFRRALELILEDTEEGGWERVVSTRNGALSVERKFI-GKNSGGSKFACIRAWCSMDVPAEAIAEMMESSERVKEYNKWFLEGRDLELLDENTKVVWASSPSPLPFVKPRDFVTVVHVRRLEDGSIIVVNRGYKHPEAPPSTEYVRGEVILAANVIRPDPKDRNRTQFTLLTQVDPGGIAPAWIVNKISAHDPVDFLERVETAAGRS 537
BLAST of NO22G01870 vs. NCBI_GenBank
Match: XP_005830971.1 (hypothetical protein GUITHDRAFT_153123 [Guillardia theta CCMP2712] >EKX43991.1 hypothetical protein GUITHDRAFT_153123 [Guillardia theta CCMP2712]) HSP 1 Score: 163.7 bits (413), Expect = 1.200e-36 Identity = 91/249 (36.55%), Postives = 139/249 (55.82%), Query Frame = 0 Query: 77 DKMRQAYQDLNKQRQDMLDNVKDRLNKAKEMAGAAFGTGEQHVEAANEHLLEKVMSVMDETEAHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGLVPPFL----VNKLCARGPVEFHNLVE 322 D+ +A+QD + +++ + + +A A VE N+ LL ++ +V+ GWEHV H+ G+ V+RK + L KF CV+A GV++A ++ EL + + RV EYN+ A+ RDL +++ TKV WA+S + F FKPRD+ T VH + DGT ++++R+ YVR EVL+ ++++P P PNK FTTIAHINPGG L N++C GPV F +E Sbjct: 165 DQRLKAWQDTVNVK---IEHFRTNVLRAPRSRRAELAASAAEVEGTNKMLLGRLFTVL---AGDGWEHVLHQDGVDVYRKRIVDLYQGGEKFYCVKAVGVIDAKAADIYELLKDSARVDEYNEECAQVRDLSALSSDTKVTWAASKTYFPFKPRDFVTRVHNTQLNDGTYVIMSRSEDVDFTDGGADYVRTEVLLAGNVMRPCPDDPNKTEFTTIAHINPGGAADTPLGAQITNRICIHGPVSFIRKIE 407
BLAST of NO22G01870 vs. NCBI_GenBank
Match: CBN76478.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 154.1 bits (388), Expect = 9.700e-34 Identity = 95/258 (36.82%), Postives = 133/258 (51.55%), Query Frame = 0 Query: 96 NVKDRLNKAKEMAGAAFGTGEQHVEAANEHLLEKVMSVMDETEAHGWEHVTHRRGITVHRKFMPAL----------------NGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGL----VPPFLVNKLCARGPVEFHNLVEKAAQRTRGQPKE 334 N R KE G ++A N+ +E V++V+ E+ GWE VT + G G +KF CV+A G L+A ++ +LF N RV EYN E RDLE +++ TKV WA +P FK RD+ T VHYR DGT++VLNR HP A KYVRAE+L+ +I++P P+K F ++ HINPGG+ + +VNKLCA+ PV +E++A + PKE Sbjct: 224 NFGARKQWVKEEEGEVISAEMLALQAENDASVEAVLAVI---ESDGWERVTEKSGXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA-NSAPVPKE 477
BLAST of NO22G01870 vs. NCBI_GenBank
Match: CBN79692.2 (conserved unknown protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 137.9 bits (346), Expect = 7.200e-29 Identity = 90/293 (30.72%), Postives = 138/293 (47.10%), Query Frame = 0 Query: 88 KQRQDMLDNVKDRLNKAKEMAGAAFGTGEQHVEAANEHLLEK-VMSVMDETEAHGWEHVTHRRGITVHRKFMPA------------------------------LNGVMS-------------------KFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGLVP----PFLVNKLCARGPVEFHNLVEKAAQR 327 KQ D L + +L K KE G E+ + L +K V +V+D GWE V R G+ VHR+++ + G + +F CV+AS +L V LF N+RV EYN++ E +DLE ++ +K+ WA+S + FK RD+CT VH+R +DGT+ +++ HP AP + +YVR+E+L+ + ++PVP P++ F + H+NPGG LVN LC PV F +E AA++ Sbjct: 278 KQNPDGLGG-EGKLGKGKE------GEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPXXXXXXXXXXXXXXVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKK 563
BLAST of NO22G01870 vs. NCBI_GenBank
Match: XP_005830512.1 (hypothetical protein GUITHDRAFT_110336 [Guillardia theta CCMP2712] >EKX43532.1 hypothetical protein GUITHDRAFT_110336 [Guillardia theta CCMP2712]) HSP 1 Score: 135.6 bits (340), Expect = 3.600e-28 Identity = 81/232 (34.91%), Postives = 127/232 (54.74%), Query Frame = 0 Query: 113 GTGEQHVEAANEHLLEKVMSVMDETEAHGWEHVTHRRGITVHRKFMPALNGV-------MSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGLVP----PFLVNKLCARGPVEFHNLVEKAAQRTRGQPKE 334 G + V N++L+E V +++D+ + W+ V+ GI + RK++PA V SKF CV+A V++A +V +LF N+RV EYN+Y E RDLE ++ TK+ + S + RD+ T VHYR + +V+NR HP A Y R E+ +GA+I++ + + PNK +FT I H+NPGGL L N+L P +F + +AA + P++ Sbjct: 299 GDMQHDVRWVNDNLVEAVETLLDDKD---WQMVSADAGINIWRKYLPADMVVAGKKIDKASKFACVKAQAVIDAPLEKVYDLFVDNSRVREYNEYCKEVRDLEWLDENTKITHSLSGRPW---SRDFVTRVHYRSIGEDVKMVVNRGEEHPLATKQAGYTRMEMSLGANIMRRLDSDPNKTLFTLITHVNPGGLATTQFGAMLTNRLSTESPRQFLQKLNEAAAAGQQLPEQ 524
BLAST of NO22G01870 vs. NCBI_GenBank
Match: EWM28098.1 (Lipid-binding START [Nannochloropsis gaditana]) HSP 1 Score: 123.6 bits (309), Expect = 1.400e-24 Identity = 74/259 (28.57%), Postives = 126/259 (48.65%), Query Frame = 0 Query: 84 QDLNKQRQDMLDNVKDRLNKAKEMAGAAFGTGEQHVEAANEHLLEKVMSVMDE------TEAHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGLVPPFLVNKLCARGPVEFHNLVEKAAQRTRGQPKEVLK 337 + L +Q+ ++ + + LN G +E + L + S+ +E E GW V+ + + R+ + A + ++ C++ S VL AS V +L + RV EYNKY D+ V TK+VW + K ++CT +H + DG+ ++L + HPE P S ++ R+E+++G + ++P PT PN+ TTI+H+ G +PPF+ K RG V+F + KA R P + K Sbjct: 172 RQLRRQQAHLVQDAEAMLN----------GDAAASLEGVDPRYLSLLQSLEEEGHQALGDEGGGWHPVSDKEDTKIWRRNL-AEDAYGREYPCLKLSTVLHASPEAVMDLLVDSERVGEYNKYSKGRDDVARVGPHTKIVWNRTLPPLQKKAHEFCTIMHVVRRPDGSQVMLTKFTDHPEVPRSSRFARSEIILGVTEVRPHPTDPNRAHLTTISHVKSAG-IPPFIAEKFSVRGVVDFAESLRKALHLERKGPVQEAK 418
BLAST of NO22G01870 vs. NCBI_GenBank
Match: XP_005820655.1 (hypothetical protein GUITHDRAFT_81208 [Guillardia theta CCMP2712] >EKX33675.1 hypothetical protein GUITHDRAFT_81208 [Guillardia theta CCMP2712]) HSP 1 Score: 120.6 bits (301), Expect = 1.200e-23 Identity = 68/200 (34.00%), Postives = 107/200 (53.50%), Query Frame = 0 Query: 138 EAHGWEHVTHRRGITVHRKFMPA-------LNGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHADGTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTTIAHINPGGLV----PPFLVNKLCARGPVEFHNLVEKAAQR 327 E+ GWE V+ I V R+F+PA G SKF CV+A+ V++A +V ELF N R EYN+Y E DLE ++ TK+ + + R++ T VHYR + +++NRA HP A + Y R + +GA++++ V + P+K FT I H++PGGL + N+L P +F +++ + R Sbjct: 2 ESDGWEEVSSEGNIKVWRRFLPADLEIAGLKVGSASKFACVKATAVIDAPLEKVFELFTDNARAHEYNEYCKEILDLEWLSEDTKITQTRTGRPW---SREFVTRVHYRSIGEDAKLIVNRAEDHPLAKHAPGYTRMNMPLGANLLKKVSSDPSKTEFTLITHVDPGGLANTKFGAMVTNRLSTESPRQFLEKLQQVSSR 198
BLAST of NO22G01870 vs. NCBI_GenBank
Match: CBJ49103.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.4 bits (298), Expect = 2.600e-23 Identity = 65/187 (34.76%), Postives = 102/187 (54.55%), Query Frame = 0 Query: 115 GEQHVEAANE-----HLLEKVMSVMDETE----AHGWEHVTHRRGITVHRKFMPALNGVMSKFCCVRASGVLEASCLEVAELFEGNTRVAEYNKYFAEGRDLEHVNNMTKVVWASSPSIFCFKPRDYCTYVHYRKHAD--GTIIVLNRAASHPEAPPSDKYVRAEVLMGASIIQPVPTHPNKCVFTT 291 GE+ +EA+ E L ++ + E GWE V HR G+TV +K+ P + K+ CV+A G++E S EV + +TRV EYN+Y D+EH+ TK+VW + K D+CT +H + D G+ +++ RA HP+AP D +VR+E+L+G +I++P P + TT Sbjct: 23 GERELEASPEAESTTKYLAELQLAQESAERALGTPGWEEVAHRGGVTVWKKYFPK-DEYGYKYPCVKARGIIEGSAAEVMSMIVDSTRVLEYNRYSKGRTDIEHLGPHTKIVWNKAQPPLSKKLHDFCTLMHMQPLDDEEGSFMLITRATEHPKAPLLDGHVRSEILLGVTILRPAKGDPTRTEMTT 208 The following BLAST results are available for this feature:
BLAST of NO22G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01870 ID=NO22G01870|Name=NO22G01870|organism=Nannochloropsis oceanica|type=gene|length=2612bpback to top protein sequence of NO22G01870.1 >NO22G01870.1-protein ID=NO22G01870.1-protein|Name=NO22G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=414bpback to top Synonyms
Publications
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