NO22G01840, NO22G01840 (gene) Nannochloropsis oceanica

Overview
NameNO22G01840
Unique NameNO22G01840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2048
Alignment locationchr22:553420..555467 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:553420..555467 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01840.1NO22G01840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|640565gene_7199Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01840.1NO22G01840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01840 ID=NO22G01840|Name=NO22G01840|organism=Nannochloropsis oceanica|type=gene|length=2048bp
CCTCCCTCCCCCTCGGCCCCCCCCTCCTGCTCGGCACCTGGGGCAGCCCC
TGCCCGTGCGAATAGAGCATCTCCACGTCCCTGGCAGTGGCCACCACGTG
GTCGACACGATTTAGTAAAGCAGTCGCACAGTCCTTCGGGCAGGCATGGG
TGGTGATAAGCGACCGCACCTCGGTACGAAAGGCCTCCAGAGAAGAGTAT
TTGACTGCTTGAATACCGTGGAAAATCGCTTCTCGTACACGGGTGAGGGG
AAGGGAGGAGGTGGGTAAGACGCCCGCGGAAAAGATTTGGGGGTATAGGA
GCTGAAGGCACTTGCCAATGTGGACACGCCGGAGGAGGGGGTCGGCAGGG
AGGAGGGAAGAGGATAAAGGGGAGGAGGAGGAGGGGTGCGTCGTGCTGGT
GCCGTTGCTGGAGGAGGGGGAGGACCCTGTCAAGTCCACCACTGCGGCCG
AAATCACGCCTGTGTTTGATGCTTCTCGCGCTGGGGCTCCTCGTGACCAT
CCATTCCTTGTCGCAGATGGCGAGTTGTGGCTGGTGCCGGGTCGGAGTCG
TGTCGAATAAATTGCTTCGTTCATCACAGGAGGGAAGAAAAGGATCAAGG
AGGTGATTGGTCCTGCCTTATGGCGCAACTGCTGTTACTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACAAAGTGGTAGGATGT
AATGGTGAGCTTTATAATGAAACCTTTGCAAGTGGTCGGCGGAATGATTT
CCATTTTATTCGCGAGTTGATGTCGGCTGTCGCTGCTACTGCTGCTGCGA
TTCTACCGCTTGCTCTCCTCCACACACACGCACGCACACAGAACACAGGC
ATACGCGAGACACACAAGGAGATCGTGACGCTCTCTCTGCTGCCATTGCC
ATCGCGGTTGCCAGTTTCCCCGTCTCTTTTCCAACCCTTATTCCAGGGAA
CTTTTAGCGCAGCATTCTCCTGACACCCCTCAATTCACTTCACCCCTCGT
ACATCACCACATACGCTTACACAAAGAACGCCGTCAGGCCCTAGATAGAG
GCACTCTGAGAGTGCTTGTCTTTGCTGGCTTCGATCCACAGAGGCGAGTA
GCCCACCGGCGGTAGCAGCACAGCAGGAGCAAGAGGCGGCCACTTGGAGT
GGGAGTGGACCATAGCAAGAGGAGAGGAGAGAGGACAAGACAGTCCTGTT
TAATGCTTGTGGGTTTATTTGAGTGAGAGGGGGAAATATGCCGCGTGTCA
CCGTCAGTACCGTTTTGGCTGgtaggtgctggtggtggatatgagggagg
gagaggcaggaagtaaaatgcaacagcaagaggaaacacgccaatcatat
ttccttcacaatatttcactctactctaactccagTTGTCGGTGCCGGTA
TTGTGCTTGTCGGTATCCTGAGCATTGCCTGTGTCATGGCCCGAATGACA
CTTCTGTGGAGGAATCAGCGTTATGCTTCATTTGGGGAAAGCAGCCTTCC
TACAGCTGCTGATACTGATGACCAATCACAAGAGGAGGGAAGAAGAGGAG
GAAGAAGAGGAGAAGATGGAGGAGGACGAGGACAAGGGGTGAGCCTTACA
TCTCTGGCGACCAAGGCGACGATGAAGAAGAATAATAAAATGGGAGGAGA
GGGAGGGGAGGGAGGGATGGCGGGAGAAGGAACGAAACGTAGGCCAGCAT
CACTGGGGAGGGGGAAGACGATGACAATAAGAGAGAAAGGTGACCCAAAA
AATGATTTCTCCTCTTCTTCTCCAACCTCTCCCGCGTGTTCTTCCTCCAC
GCTCTCTACCATGCCCTCTTCACTGGCAGGGATAGAGGGAGGGAGGGAGG
GAGGATGGAGGGGGGTAGCTATTGTGCATATGGACTCGCTTTCTGGTGAG
GCGGCACCATCGAGAAGGAAAGAAGGAGGAGGGGAGGGGGGGATTGAGGA
GGGAGAGGAGGAAGGGGAAGAGGTGATGGAGGAGGTAGCTTTACATGATG
TTGATTTGGAGGCACAGGCGGAGACGGCTTGTCAATAGGGGGGGAGGG
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protein sequence of NO22G01840.1

>NO22G01840.1-protein ID=NO22G01840.1-protein|Name=NO22G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MPRVTVSTVLAVVGAGIVLVGILSIACVMARMTLLWRNQRYASFGESSLP
TAADTDDQSQEEGRRGGRRGEDGGGRGQGVSLTSLATKATMKKNNKMGGE
GGEGGMAGEGTKRRPASLGRGKTMTIREKGDPKNDFSSSSPTSPACSSST
LSTMPSSLAGIEGGREGGWRGVAIVHMDSLSGEAAPSRRKEGGGEGGIEE
GEEEGEEVMEEVALHDVDLEAQAETACQ*
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Synonyms
Publications