NO22G01730, NO22G01730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01730 vs. NCBI_GenBank
Match: EWM21524.1 (psbp domain-containing protein chloroplastic-like protein [Nannochloropsis gaditana]) HSP 1 Score: 332.4 bits (851), Expect = 1.200e-87 Identity = 183/252 (72.62%), Postives = 204/252 (80.95%), Query Frame = 0 Query: 2 ITTNLVLLLILGLLSVSIHAFVPAAPLTSRQASSLLVRNAEQEASTSSVSRSDILRQGGLASIAGVLALTGSGNILSSYFTPLSASAADAATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDPNSQANVFIAYTPVQPDFTTLGAFGSILDVAKTIVPKGRGVESKLLKYEGRKGAYYYDYVIQPDGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWAALEPVYEKITNSFSVG 254 I T+ +L +L LL+ +AF PAA L+ ++ LL R+AE T VSRS+IL+Q GL S AG+LALTG +L+ +ASA +A EQSYFDEKYKVAFEH+P W RTDTTIGTNNLDPRRIVVFKDP+S+ANVFIAYTPVQPDFTTLGAFGSILDVAKTIVPKGRGVESKLL YEGRKGAYYYDYVIQP GQPKRHLTTLFALITISGTGECLATYTTSCLEDQW LEPV++ IT SF VG Sbjct: 27 IRTSFEVLSVLTLLAFG-NAFAPAA-LSRGRSPRLLTRSAE---GTPLVSRSNILQQCGLISSAGILALTGGPFLLNIE----TASADEAGAAGEQSYFDEKYKVAFEHIPAKWGRTDTTIGTNNLDPRRIVVFKDPSSEANVFIAYTPVQPDFTTLGAFGSILDVAKTIVPKGRGVESKLLNYEGRKGAYYYDYVIQPAGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWTVLEPVFDNITKSFRVG 269
BLAST of NO22G01730 vs. NCBI_GenBank
Match: CBJ31094.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.4 bits (272), Expect = 1.700e-20 Identity = 57/154 (37.01%), Postives = 91/154 (59.09%), Query Frame = 0 Query: 97 QSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDPNSQ-ANVFIAYTPVQPDFTTLGAFGSILDVAKTIVPKGRGVESKLLKYEGRKGAYYYDYVIQPDGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWAALEPVYEKITNS 250 Q++ D+ F+ VP WER D I R+IVV+ P + AN F+AYTP + DFTTLG+FG++ +V+KT++P+ GV S++L+ K +Y YDY++ +G+P++H+ T++ L G LAT T C E +A + + + S Sbjct: 80 QTFTDDALGFNFD-VPDGWERNDAEISGR----RKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWVLFPEQGQ---LATITAQCNESDYAKVGKTIDSLIAS 225
BLAST of NO22G01730 vs. NCBI_GenBank
Match: KOO22412.1 (psbp domain-containing protein chloroplastic-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 104.4 bits (259), Expect = 5.500e-19 Identity = 65/180 (36.11%), Postives = 96/180 (53.33%), Query Frame = 0 Query: 84 LSASAADAATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDPNSQ-ANVFIAYTPVQPDFTTLGAFGSILDVAKTIVPK-----------GRGVESKLLKYEGRKGAYYYDYVIQPDGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWAALEPVYEKITNSFS 252 L A AA+ SY DE+Y V+F +P+ + + D RR+V DPN NVFIA+TP++PD+T+LG+FG+I + T++P+ G +E +L+ KG++ YDY IQ G P RHL +L A I G L T T CLE + AA+ ++ I S++ Sbjct: 42 LQPRPAAAASALPTSYKDERYGVSF-LLPEGYVMKPQELA----DGRRLVTATDPNDDTTNVFIAFTPIRPDYTSLGSFGTIDFIGSTLLPQCGSNGACAFASGDDIEGVMLEQASVKGSFVYDYTIQQQGGPMRHLRSLLA-IKADGAASVLITLTAQCLEPKHAAVAATFKAIIESYA 215
BLAST of NO22G01730 vs. NCBI_GenBank
Match: OEU20656.1 (hypothetical protein FRACYDRAFT_267716 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 101.7 bits (252), Expect = 3.600e-18 Identity = 74/212 (34.91%), Postives = 113/212 (53.30%), Query Frame = 0 Query: 55 ILRQGGLASIAGVLALTGSGNILSSYFTPLSASAAD------AATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDPNSQAN--VFIAYTPVQPDFTTLGAFGSILDVAK-TIVPKG-----RGVESKLLKYEGRKGAYYYDYVIQPDGQPKRHLTTLFALITIS--GTGECLATYTTSCLEDQWAALEPVYEKITNSF 251 I R+ AS A V A S ++L + A+AAD T +Y DE K + + VP W + + T+ D R+I ++ P+S +FIAYTPV+ DFTTLG+FGS+ +V + TI+PK GV++ +L +K AY++DYV QPK H T+F+L + G G L T T E + +++P++ KI +S+ Sbjct: 31 ISRRNVFASSASVAAAGFSSSLLIDLSSIAPANAADDVASSSPTTPTLNNYKDEACKFSID-VPSDWIKNENTLP----DRRKIDIYFKPDSDQKTLMFIAYTPVRSDFTTLGSFGSVDEVGQSTILPKSDLMGKDGVDATMLSAVAKKQAYFFDYVQTVPSQPKTHFQTIFSLAVEANGGKGNVLVTITVQAPEADYDSMKPLFTKILDSY 237
BLAST of NO22G01730 vs. NCBI_GenBank
Match: XP_002178521.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50186.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 94.7 bits (234), Expect = 4.400e-16 Identity = 65/179 (36.31%), Postives = 101/179 (56.42%), Query Frame = 0 Query: 83 PLSASAADAATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDP-NSQANVFIAYTPVQPDFTTLGAFGSILDV-AKTIVPK----GRGVESKLLKYEGRKGAYYYDY-VIQPDGQPKRHLTTLFALI--TISGTGECLATYTTSCLEDQWAA-LEPVYEKITNSFS 252 P +A A T+ + D ++ + VP W RT+ + D R IVV+ DP +++A+VF+AYTPV+ DFT+LG+FGS+ V A+TI+PK G VE+ +L +K AY++DY P+ QP H T+F L G G L T T C E+ +A + +++ I +S++ Sbjct: 49 PSTAVAVSVPTL--TPFLDSRHGFTVD-VPSQWSRTEQQLS----DRRTIVVWTDPADARASVFVAYTPVRDDFTSLGSFGSVDQVAAQTILPKAQIAGVDVEATMLAAVSQKQAYFFDYRQAVPNVQPPTHFRTIFTLQQGATGGAGAVLVTLTAQCPEELYATKYQSLFDSILDSYA 220
BLAST of NO22G01730 vs. NCBI_GenBank
Match: XP_005775160.1 (hypothetical protein EMIHUDRAFT_95376 [Emiliania huxleyi CCMP1516] >EOD22731.1 hypothetical protein EMIHUDRAFT_95376 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 85.9 bits (211), Expect = 2.000e-13 Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 0 Query: 104 YKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDP--NSQANVFIAYTPVQPDFTTLGAFGSILDVAKTIVPKGRGVESKLLKYEGRKGAYYYDYVIQPDGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWAALEPVYEKITNSFSVGQK 256 Y+V F P W ++ + + R + + DP ANV + + P+ D+T+LG+FG+ V +++P GAY YDY IQ G+ RHL TLFA+ T G G L T T C E ++A L+P+++K+ S+S K Sbjct: 67 YQVTF-GAPAGWPVSEQELQGS----RYLYIATDPAEPDSANVVLTFQPLAADYTSLGSFGTQQLVGNSLMP--------------HLGAYTYDYTIQQTGKAPRHLRTLFAVQTEEGRGRRLVTLTAQCYESKYAELKPMFQKVLESYSTSLK 201
BLAST of NO22G01730 vs. NCBI_GenBank
Match: XP_002296532.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87228.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 77.4 bits (189), Expect = 7.200e-11 Identity = 80/281 (28.47%), Postives = 132/281 (46.98%), Query Frame = 0 Query: 2 ITTNLVL-LLILGLLSVSIHAFVPAAPLTSRQASSLLVRNAEQEASTSSVSRSD---ILRQGGLASIAGVLALTGSGNILSSYFTPLSASAADAATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDPNSQAN--------VFIAYTPVQPDFTTLGAFGSILDVAK-TIVPKGRGV----ESKLLKYEGRKGAYYYDYVIQP----------DGQPKR----HLTTLFALITISGT-GECLATYTTSCLEDQWAALEPVYEKITNSF 251 + T L+L +L++ S + V + S S+L V + ++S D + R+ L SIA LT S L S +AAD+ + D + ++ +P +WE+T + R+ + F D N+ +N +FIAYTP++ DFT+L +FGS+ VA+ TI+PKG V +SK+L + AYY+DYV P K+ H T+F L+ + T G L T T E+++ L+ ++++I S+ Sbjct: 1 MNTKLILPVLLITSTSAFQSSVVSKRAVDSTSLSALNVNDEHTMHLVDNISSPDKKRVARRTFLNSIAAASLLTTSPITLIS-------NAADSTNFSTFTDPDFNFHIS---IPSSWEQTTQKLSGR----RKAIFFTDTNTASNENNAIDTLLFIAYTPIRDDFTSLASFGSVDQVAQSTILPKGELVGAEDDSKMLSATSKNNAYYFDYVSTPVVPVEAGSGSSALTKKLNPMHFRTIFTLLPLKDTAGLTLVTVTMQTTEEKYGGLKGLFDEIVGSY 267
BLAST of NO22G01730 vs. NCBI_GenBank
Match: GAX21677.1 (hypothetical protein FisN_29Hh117 [Fistulifera solaris]) HSP 1 Score: 77.0 bits (188), Expect = 9.400e-11 Identity = 61/186 (32.80%), Postives = 92/186 (49.46%), Query Frame = 0 Query: 75 NILSSYFTPLSASAADAATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDP-NSQANVFIAYTPVQPDFTTLGAFGSILDV-AKTIVPKG--RGVE----SKLLKYEGRKGAYYYDYVIQPDGQPKRHLTTLFALI--TISGTGECLATYTTSCLEDQWAALEPVYEKITNSF 251 N L+S L S + A T + FD+ + VP W + + D R +++++DP ++ + IAYTPV+ DFT+L +FGS+ V A+TI+PKG G E +K+L KGAY++DY G H +FAL G G L T T E ++ L+ + I +SF Sbjct: 32 NSLASSSALLLPSVSAAVTSDRLQLFDDPIRNFSIQVPTQWTFSKQIL----RDRRELLLWQDPADAWTALTIAYTPVRDDFTSLASFGSVDQVAAQTILPKGALAGSEDDPFAKMLSATSAKGAYFFDYRQTVPG-TLTHFRAIFALQQGATGGAGSILVTITAQTPESRYPVLQKTLDAIVDSF 212
BLAST of NO22G01730 vs. NCBI_GenBank
Match: GAQ88443.1 (PsbP domain-containing protein 3 [Klebsormidium nitens]) HSP 1 Score: 75.9 bits (185), Expect = 2.100e-10 Identity = 67/237 (28.27%), Postives = 109/237 (45.99%), Query Frame = 0 Query: 24 PAAPLTSRQASSLLVRNAEQEASTS-SVSRSDILRQGGLASIAGVLALTGSGNILSSYFTPLSASAADAATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDPNSQANVFIAYTPVQPDFTTLGAFGSILDVAKTIV-------PKGRGVESKLLKYEGRKGAYYYDYVIQPDGQPKRHLTTLFALITISGTGECLATYTTSCLEDQWAALEPVYEKITNSFSV 253 P+ L + S V +AE S S SR ++L+ LAS+A V TG+ A+A + + + Y D K +P W + + G + R + FK+ ++ NV + TP+ D+T +G+FG+ +T+V K +G E+KLL + + G Y+ +Y Q GQ KRHL + + GT L T T E+++A V K+ +SF + Sbjct: 43 PSRQLKGGKCSVQAVHDAETSVSRSVPPSRREVLQ--ALASLA-VAGATGA--------CCQPAAAGEGGSTQFLPYMDSDGKFGLS-IPADWAQGE---GKASSQRRVVAFFKEGDTDTNVNVVITPLSADYTKMGSFGTAEAFGETLVNGLDRSWAKPKGPEAKLLDAKTKNGRYFVEYTFQAPGQMKRHLMSSIGM-GFDGTYNRLYTVTAQAREEEFAQYAGVLNKVLSSFEL 263
BLAST of NO22G01730 vs. NCBI_GenBank
Match: GAX14898.1 (hypothetical protein FisN_29Lh117 [Fistulifera solaris]) HSP 1 Score: 74.3 bits (181), Expect = 6.100e-10 Identity = 58/183 (31.69%), Postives = 92/183 (50.27%), Query Frame = 0 Query: 82 TPLSASAADAATVEEQSYFDEKYKVAFEHVPKAWERTDTTIGTNNLDPRRIVVFKDP-NSQANVFIAYTPVQPDFTTLGAFGSILDV-AKTIVPKG--RGVE----SKLLKYEGRKGAYYYDY----VIQPDGQPKRHLTTLFALI--TISGTGECLATYTTSCLEDQWAALEPVYEKITNSF 251 TP+SA T + FD+ + VP W ++ + D R +++++DP + + + IAYTP++ DFT+L +FGS+ V A+TI+PKG G E +K+L K AY++DY + +G P H +FAL G G L T T E ++ L+ + I +SF Sbjct: 47 TPISA----VLTADSLQLFDDPVRGFSLMVPSEWIFSNKVL----RDRRELLLWQDPTDGRTALTIAYTPIRDDFTSLASFGSVDQVAAQTILPKGALAGFEDDPFAKMLSATSAKQAYFFDYRQTVPLTDEGTP-THFRAIFALQQGATGGAGSMLVTITAQTPESRYPVLQKTLDAIVDSF 220 The following BLAST results are available for this feature:
BLAST of NO22G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01730 ID=NO22G01730|Name=NO22G01730|organism=Nannochloropsis oceanica|type=gene|length=1616bpback to top protein sequence of NO22G01730.1 >NO22G01730.1-protein ID=NO22G01730.1-protein|Name=NO22G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=259bpback to top protein sequence of NO22G01730.2 >NO22G01730.2-protein ID=NO22G01730.2-protein|Name=NO22G01730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top Synonyms
Publications
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