NO22G01710, NO22G01710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01710 vs. NCBI_GenBank
Match: EWM30127.1 (sodium-dependent glucose transporter 1 [Nannochloropsis gaditana]) HSP 1 Score: 108.6 bits (270), Expect = 9.000e-20 Identity = 86/283 (30.39%), Postives = 128/283 (45.23%), Query Frame = 0 Query: 50 VVSVIACLSWVSMGGLQGLLGPAIPAIAKHL-AMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSK--AGPWLQGLHFSFGIGAILSSLVLGISGITASFNFFGCVGMLPLVVVVVVEKLSRWREKDKEGRKNQVIVVXXXXGREDEGGKTRQFHRNSTKDMHFVFEEGP-----TGAGREEEARVVYDEGKNDKKRLTLFPPTRPVLAKGGLSAPFSLPSSIL 325 +++VIAC+S+ S+GGL G+ GPAIP++ HL T LG AFT R GY+TG++ S L + K +++ L+A + + + + G L L LQG GL + T N ++LE WG P +Q +H FGIGA+ S +G G +F + + +LPL + W G T D ++ E GA EE R + G + K+R TL P R + GL P S+PS++L Sbjct: 31 LITVIACISFFSLGGLVGVTGPAIPSLTVHLGCRDETQLGSAFTCRGAGYLTGAVLASVL-DTRCSKGKHLVVVMGSLLAGLATLGIVWTHVFSGFLVLMVLQGLGLGCVDTAANAVVLELWGGSPHVEPLMQAMHACFGIGAVASPAAVGALGYVLAFRLWASIALLPLFL---------W------------------------AGGLMMAGTGRTGDGEVLWGEATLPLLRDGAHHSEEGR-EEEPGSSRKERETLPRPFRD--REAGLGRPTSVPSTVL 276 HSP 2 Score: 67.0 bits (162), Expect = 3.000e-7 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 0 Query: 558 LTLFLGLYVGGECGFGGWISTFVLMEGATSSASQAAFLVSIFWAAVTGGRAVAVGQALVVGPSWSLRLQLFISLCGATAFCVLGADSFKGAAVATGNFCL 658 ++ FL +YVG E G+GGWI+T +L +G T S A++ VS+FW A+T GR +A+ A + P SL LQL +S GA + AAVA+ F L Sbjct: 307 VSFFLLIYVGIEVGYGGWIATVLLRQGLTQSLPVASYSVSMFWGAITLGRLLAIPLATCLPPVPSLLLQLGLSTLGAICLLTFAFQTLWTAAVASVVFGL 406
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_010788747.1 (PREDICTED: sodium-dependent glucose transporter 1 [Notothenia coriiceps]) HSP 1 Score: 85.5 bits (210), Expect = 8.200e-13 Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = 0 Query: 50 VVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLS--IISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLV 196 +V++ C +++ +G ++GP +A ++ ++L + F R+ GYI GSLF L D + P +++ CS LV S+ A+P LL C + G++ I+ T+GN+++L TWG +AGP LQ LHFSF GA +S ++ Sbjct: 74 IVTLALCAAFLGLGMSISVIGPTFEDLAVNVNKNISNLSYIFVGRSAGYIGGSLF-GGLLFDCMSPH--LLLGCSLLVTSVGMCAIPFCRQ--ALLLTCLMSSIGVTTGILDTVGNVLILNTWGEQAGPHLQALHFSFAAGAFVSPII 216
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_017306924.1 (PREDICTED: sodium-dependent glucose transporter 1 isoform X1 [Ictalurus punctatus]) HSP 1 Score: 82.0 bits (201), Expect = 9.000e-12 Identity = 48/151 (31.79%), Postives = 83/151 (54.97%), Query Frame = 0 Query: 45 ASKKVVVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLV 196 A + ++++ C S++ +G +LGP + +A +L +++ + F RA GYI GSL + + D + P +++ + L+ S A P L L L G + ++ T GN++LL TWG +AGP +Q LHFSF +GA +S ++ Sbjct: 81 ACSRWMITLTLCASFLGLGMCISVLGPTLEDLATNLNKNISNISYIFACRATGYIAGSL-LGGILFDLINPH--LLLGFAMLLTSFGMFATPFCKKALVLAALVSTVGVSMGVLDTGGNVLLLNTWGDQAGPHMQALHFSFALGAFVSPII 228
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_022540878.1 (sodium-dependent glucose transporter 1 [Astyanax mexicanus]) HSP 1 Score: 81.3 bits (199), Expect = 1.500e-11 Identity = 51/146 (34.93%), Postives = 82/146 (56.16%), Query Frame = 0 Query: 50 VVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLV 196 +V+V C S++ +G +LGP + +AK++ +++ + F RA GYI GSL + + D V P +++ S LV S A+P L L L G + I+ T GN+++L TWG ++GP +Q LHF+F GA +S +V Sbjct: 49 MVTVTLCTSFLGLGMCISVLGPTLEDLAKNVNKNISNISYIFAGRATGYIGGSL-LGGILFDFVNPH--LLLGFSMLVTSFGMFAIPFCKKALILTVLVSSVGVTMGILDTGGNVLILNTWGDQSGPHMQALHFTFAAGAFVSPIV 191
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_022792506.1 (sodium-dependent glucose transporter 1A-like [Stylophora pistillata] >PFX24485.1 Sodium-dependent glucose transporter 1 [Stylophora pistillata]) HSP 1 Score: 81.3 bits (199), Expect = 1.500e-11 Identity = 45/149 (30.20%), Postives = 84/149 (56.38%), Query Frame = 0 Query: 48 KVVVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLVL 197 +V S+ + + +G +LGP + +A + + FT RA GY+ GS+ L + + + ++++ S + A+++ A+P+ TS++GLL + G L + T GN++LL TWG K+ P++Q LHF F +GA ++ L++ Sbjct: 80 QVAKSICLFVCFFGLGISVAILGPTLIELACQAQTELAEMSFVFTARAIGYLIGSIVGGWLFD---KYNGHLVLSLSCVWAAVMMWALPYVTSLIGLLLVVVFMGLALGSVDTGGNVLLLNTWGKKSRPYMQALHFVFALGAFVAPLIV 225
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_017544085.1 (PREDICTED: sodium-dependent glucose transporter 1 [Pygocentrus nattereri]) HSP 1 Score: 79.3 bits (194), Expect = 5.800e-11 Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 0 Query: 50 VVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLV 196 +V++ C S++ +G +LGP + +AK++ +++ + F RA GYI GSL V + D + P +++ + L+ S A+P L L L G + I+ T GN+++L TWG +AGP LQ LHF+F GA +S ++ Sbjct: 47 MVTMTLCGSFLGLGMSISVLGPTLEDLAKNVNKNMSNISYVFAGRATGYIGGSL-VGGVLFDFLNPH--LLLGFAMLLTSFGMCAIPFCKKALILTLLVSSVGVSMGILDTGGNVLILNTWGDQAGPHLQALHFTFAAGAFVSPII 189
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_008296510.1 (PREDICTED: sodium-dependent glucose transporter 1 [Stegastes partitus]) HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10 Identity = 51/159 (32.08%), Postives = 86/159 (54.09%), Query Frame = 0 Query: 50 VVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGA----ILSSLVLGISGITAS 205 +V++ C S++ +G +LGP +A ++ +++ + F R+GGYI GSL + L D + P +++ S L+ + A+P L L G + ++ T GN+++L TWG +AGP +Q LHFSF GA I++ LV G G ++S Sbjct: 82 IVTLALCGSFLGLGMSISVLGPTFHDLAVNVKQDISNISYIFVGRSGGYIGGSL-LGGLLFDCMNP--YVLLGSSMLITAFGMCAIPFCKQALLLTAFMSSIGMSMGVLDTGGNVLILNTWGEQAGPHMQALHFSFAAGAFMSPIIAKLVFGTDGNSSS 237
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_020469753.1 (sodium-dependent glucose transporter 1 [Monopterus albus]) HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10 Identity = 49/156 (31.41%), Postives = 84/156 (53.85%), Query Frame = 0 Query: 40 HKHLNASKKVVVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLV 196 H+H + +V++ C S++ +G +LGP +A+++ +++ + F R+ GYI GSL + + D V P +++ S LV + A+P L L G + I+ T GN+++L TWG +AGP +Q LHFSF GA +S ++ Sbjct: 71 HRH-GTCGRWMVTLALCASFLGLGMCISVLGPTFGDLAENVKKNISNISYIFVGRSAGYIGGSL-IGGILFDCVNPH--LLLGFSMLVTAFGMCAIPFCGQALLLTGFISSIGISMGILDTGGNVLILNTWGEQAGPHMQALHFSFAAGAFVSPII 222
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_015417089.1 (PREDICTED: LOW QUALITY PROTEIN: sodium-dependent glucose transporter 1 [Myotis davidii]) HSP 1 Score: 77.8 bits (190), Expect = 1.700e-10 Identity = 47/155 (30.32%), Postives = 86/155 (55.48%), Query Frame = 0 Query: 51 VSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLVLGIS-GITAS 205 ++ I C S++ +G +LGP P +A ++ +SL F RA GY++GS+ + + D + P +++ S L ++ +P +++ L+ + + G + I+ T GN+++L WG K P +Q LHFSF +GA L+ L+ ++ G T S Sbjct: 96 ITGILCASFLGLGFSVAVLGPTFPDLAANVNRNISSLSLIFVGRAAGYLSGSV-IGGVLFDSMNP--FLLLGVSMLATTVGLYLVPFCKTVVLLIVMTSIFGVSMGILDTGGNVLILAIWGDKGAPHMQALHFSFAVGAFLAPLLAKLALGTTVS 247
BLAST of NO22G01710 vs. NCBI_GenBank
Match: XP_009091186.2 (PREDICTED: sodium-dependent glucose transporter 1 isoform X1 [Serinus canaria]) HSP 1 Score: 77.0 bits (188), Expect = 2.900e-10 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 0 Query: 45 ASKKVVVSVIACLSWVSMGGLQGLLGPAIPAIAKHLAMPNTSLGWAFTVRAGGYITGSLFVSRLREDGVRPSKVMIMACSGLVASIINVAMPHSTSMLGLLFLCFLQGNGLSIISTLGNIILLETWGSKAGPWLQGLHFSFGIGAILSSLV 196 A+ + +S C S++ +G + +LGP P +A ++ + + + F R+ G + GS+ V + D + PS ++ + G A + +P L L L + G L I+ T N++ L TWGS+AGP LQ LHFSF GA+L+ +V Sbjct: 45 AALRWCISGTLCASFLGLGMIIAVLGPTFPTLAANVGKNVSDIYYIFVGRSLGSLGGSV-VGGVLLDCMNPSLLLAFSMLGTAAGL--YVIPWCKQSLVLTILMSVIGGFLGILDTGANVLALYTWGSEAGPHLQALHFSFAAGAVLAPMV 192 The following BLAST results are available for this feature:
BLAST of NO22G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01710 ID=NO22G01710|Name=NO22G01710|organism=Nannochloropsis oceanica|type=gene|length=7523bpback to top protein sequence of NO22G01710.1 >NO22G01710.1-protein ID=NO22G01710.1-protein|Name=NO22G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=763bpback to top protein sequence of NO22G01710.2 >NO22G01710.2-protein ID=NO22G01710.2-protein|Name=NO22G01710.2|organism=Nannochloropsis oceanica|type=polypeptide|length=799bpback to top Synonyms
Publications
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