NO22G01660, NO22G01660 (gene) Nannochloropsis oceanica

Overview
NameNO22G01660
Unique NameNO22G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1457
Alignment locationchr22:485204..486660 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:485204..486660 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004094NSK004094Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01660.1NO22G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01660.1NO22G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01660 ID=NO22G01660|Name=NO22G01660|organism=Nannochloropsis oceanica|type=gene|length=1457bp
ACAGGCTGGCTCGAAGCCAAGGTTGGACATCCAACGTCAACGTAAAAACG
TCCCCTATTTCGTCGAATCCAAGACTGCCGGCCATGCCGGTGCTGCCGCA
TCATTTCTACGCCTTCCTCTCCCTAGTGCTTCCGCTACAGTACTTTGCCA
CCGCTAACGCCACAGTTGGTAGCCCTGAGGTCTCAAAGGGCGAGGCCCGT
CATGATGTCCTCTTCTCCGGTACCGAGAAGAAATACGCCGAGCTGCTTCC
CGTCGTGGGCAACGGATTCCTTAGTTGGCAGATCGATAGTCCCTATGTCT
TCATGAATGGCTTGTACACTCGCCAAGGATGCGAGAAGGCTGTGGTACGT
CGTGCATGCTTGCCATCACAGCTCTCTATTCTCCCAGAAGCAACCTCTGA
AGCTGGAAACGAGGCTGGCGCCACCCCACGCGCAAGAACGACAAGCACCT
TCTTGGGCGAGGCCCTGGAGGTGCATACGGGGAGTTTTGTGCGTCGTCGT
CGCTTTACACGTCAGGACAAGGCAGATGGGAAGGCAACGGTGGACGTGGA
GCAACGATGGTATGCACACAGATCCCTCCATTCGGTGCTGGTAATGGATA
TCAAAGTGACGACGACGACACCACAAACCTTAGCCGCAAAACCATTGGAA
CTGCTATTGGTTGATACGAGTATAAGGGATAATTGTAACAAGCGGAAGCG
GGGTAAAAATAATGGAAAGGAGGGAGGGAAGGAGGGAGATGTGGAGAAGA
ACGGCAATAATAGCACCAGCAGCAGCACCAGCACCAGCCTCGCAGTGGTG
GTGGGGACAGTGTCCGGGGACATGAGCGAAGGGAATGGTAAAATAGAGAA
AATGGAAATTCTAAACAACACCGGCAGCACCAGCACCAAAGCCAGCACCA
ATAACAGCCCCGGCGAGGAGCGCAACGGCGCTTTTACATATCAGGACATT
GTCTTCGAAGACTTTTCGTCGCAGCACCCTGGCCTACGTGTCTATCAAGG
CAAAGTCCAAGCCCCTGAAAATTCTTCTGCGACCATCCTTGTTTCGCTTG
TCTCCACCCTTCTCCCTCCCTCCATCCTGGTCCAGGAGAACCAAACATGG
CACTTTCTCTCTGCCATGCGCAGCTCCTTTAAGGAGAAAGGGAAGGAGGG
AGGGAAGGAGGACAACCCGTTACAGGCCACTCTGTTGGATAACAAAATGG
CCAGGGGCATGGCCCAGTCCCAGGAGCTTTTTGAGCTGCACAAGGACGGG
TGGAAACAGTGGTGGAATGGGGTAGGGGTGGAGGTGGAGGTCGAGGGAGG
GAGGGAGGGAGGGTCCGAGGAAGGGGCAGAGGCTTGGCTTCCATCAGCTG
TGAACAGCTCGCTTTATGCTCTGGGAAGCACGGCTCGAGATGACTGGGTG
TTTGGGGTGGGGCGGGGGGGGGGACCGTCGTGCCGCGGGAGGGCGGGGGG
GAGGTAG
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protein sequence of NO22G01660.1

>NO22G01660.1-protein ID=NO22G01660.1-protein|Name=NO22G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MPVLPHHFYAFLSLVLPLQYFATANATVGSPEVSKGEARHDVLFSGTEKK
YAELLPVVGNGFLSWQIDSPYVFMNGLYTRQGCEKAVVRRACLPSQLSIL
PEATSEAGNEAGATPRARTTSTFLGEALEVHTGSFVRRRRFTRQDKADGK
ATVDVEQRWYAHRSLHSVLVMDIKVTTTTPQTLAAKPLELLLVDTSIRDN
CNKRKRGKNNGKEGGKEGDVEKNGNNSTSSSTSTSLAVVVGTVSGDMSEG
NGKIEKMEILNNTGSTSTKASTNNSPGEERNGAFTYQDIVFEDFSSQHPG
LRVYQGKVQAPENSSATILVSLVSTLLPPSILVQENQTWHFLSAMRSSFK
EKGKEGGKEDNPLQATLLDNKMARGMAQSQELFELHKDGWKQWWNGVGVE
VEVEGGREGGSEEGAEAWLPSAVNSSLYALGSTARDDWVFGVGRGGGPSC
RGRAGGR*
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Synonyms
Publications