NO22G01570, NO22G01570 (gene) Nannochloropsis oceanica

Overview
NameNO22G01570
Unique NameNO22G01570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2591
Alignment locationchr22:461932..464522 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:461932..464522 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO22G01570 vs. NCBI_GenBank
Match: OQS06220.1 (hypothetical protein THRCLA_01738 [Thraustotheca clavata])

HSP 1 Score: 188.0 bits (476), Expect = 7.100e-44
Identity = 113/348 (32.47%), Postives = 154/348 (44.25%), Query Frame = 0
Query:   24 DGEILPLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSW--ESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            + + + L   +++ FI  GYVLLK+AF    AAACR+ +W  +E++                                                   ++R D  TWP K  I+  Y    G PW+NV T RL +A+DQLC G   W  E   CGWW+ITFP                                      +  HPW   GHWH+DG      I +++ GL+PIFLF+DI  G GGTA+  GSH ++A++L +A   GM   +V    +AWV +  +          +VET G+AGDVM THPFL+H RS NC                VRFMC+P+V L
Sbjct:    3 ENDEIGLLPEEVDFFIEHGYVLLKKAFSTETAAACREFLWERLEKDG--------------------------------------------------LNRHDSLTWPEKHWISESYDKNTGDPWTNVITPRLKRAMDQLC-GVERWKTEELTCGWWVITFPG-------------------------------------HAMHPWAPAGHWHVDGSRYIHHIDSKESGLLPIFLFNDINPGDGGTAISPGSHHHVAQILHKAAHNGMKGGKVSATAKAWVLKNKKS---------IVETQGKAGDVMLTHPFLMHARSKNCG-------------HEVRFMCNPNVGL 240          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: XP_008874597.1 (hypothetical protein H310_10111 [Aphanomyces invadans] >ETV96820.1 hypothetical protein H310_10111 [Aphanomyces invadans])

HSP 1 Score: 184.1 bits (466), Expect = 1.000e-42
Identity = 118/369 (31.98%), Postives = 160/369 (43.36%), Query Frame = 0
Query:    6 DSRGNDSVD-GGTN--IGPTADGEILPLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSW--ESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            D+R   + D  GTN  +G   + E + LS  ++  FI  G+V+L+ AF    AAACR+ +W  +E++                                                   + R D +TWP K  I+  Y  E GSPW++V T RL +A+DQ+C G G W      CGWW++TFP                                      +   PW   GHWH+DG      I +++ GL+PIFLFSDI  G GGTAL  GSHK++A +L  A P G+   +V    + WV +  +           VE  G AGDVM THPFL+H RS NC                VRFMC+P+V L
Sbjct:   10 DAREEVATDIAGTNKIVGKGLETEEIGLSEDEVAHFIEHGFVMLRNAFSVETAAACREFLWNRIEKDG--------------------------------------------------VKRHDCATWPEKHWISESYNDETGSPWTDVLTPRLKRAMDQVC-GEGRWVPSDLTCGWWVLTFPG-------------------------------------HAMLPWAPAGHWHVDGARYIHHIDSKESGLLPIFLFSDIAPGDGGTALAPGSHKHVAHILAAAQPHGLKGGQVSASAKTWVYQHKQSW---------VEVQGRAGDVMLTHPFLMHARSKNCG-------------ASVRFMCNPNVGL 268          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: OQR99363.1 (hypothetical protein ACHHYP_06947 [Achlya hypogyna])

HSP 1 Score: 182.2 bits (461), Expect = 3.900e-42
Identity = 111/342 (32.46%), Postives = 150/342 (43.86%), Query Frame = 0
Query:   30 LSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSW--ESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            L+  ++  F+  GYVLLK+AF P  AAACR+ +W  + ++                                                   I R +  TWP K  I+  Y    G PW++V T RL +A+DQLC G   W  +   CGWW++TFP                                      +   PW   GHWH+DG      I +++ GL+PIFLF+DI  G GGTAL  GSH ++A++L++A P GM   +V    +AWV            + + VET GEAGDVM THPFL+H RS NC                VRFMC+P+V L
Sbjct:   12 LTPEEVRHFVEHGYVLLKKAFSPDTAAACREFLWDRIAKDG--------------------------------------------------IDRQNSLTWPEKHWISESYNDVTGDPWTSVLTPRLKRAMDQLC-GVDRWQPDDLTCGWWVLTFPG-------------------------------------HAMLPWAPAGHWHVDGARYVHHIDSKESGLLPIFLFNDIGPGDGGTALSPGSHHHVAQILQKAVPNGMKGGKVSAMAKAWVHR---------HKAQFVETQGEAGDVMLTHPFLMHARSKNCG-------------HEVRFMCNPNVGL 243          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: XP_009841218.1 (hypothetical protein H257_14967 [Aphanomyces astaci] >ETV69361.1 hypothetical protein H257_14967 [Aphanomyces astaci])

HSP 1 Score: 180.6 bits (457), Expect = 1.100e-41
Identity = 115/363 (31.68%), Postives = 154/363 (42.42%), Query Frame = 0
Query:    9 GNDSVDGGTNIGPTADGEILPLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSW--ESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            GN+S D   +     + E + LS  ++  FI  GYVLL+ AF    AAACRD +W  +E++                                                   + + D +TWP K  I+  Y  + GSPW+ V T RL +A+DQ+C G   W      CGWW++TFP                                      +   PW   GHWH+DG      I +++ GL+PIFLFSDI  G GGTAL  GSHK++A +L  A P G+   +V    + WV +  +           VE  G AGDVM THPFL+H RS NC                VRFMC+P+V L
Sbjct:   12 GNESKD--KDDSQDTEDEEIGLSEEEVAHFIEHGYVLLRNAFPVDTAAACRDFLWNRIEQDG--------------------------------------------------VKQHDCATWPEKHWISESYDDKTGSPWTEVLTPRLKRAMDQVC-GEDRWIPSDLTCGWWVLTFPG-------------------------------------HAMLPWGPAGHWHVDGARYIHHIDSKESGLLPIFLFSDIAPGDGGTALAPGSHKHVAHILAAAKPHGLKGGQVSAAAKGWVNQHKQSW---------VEVQGRAGDVMLTHPFLIHARSKNCGAT-------------VRFMCNPNVGL 262          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: XP_009033885.1 (hypothetical protein AURANDRAFT_61881 [Aureococcus anophagefferens] >EGB11527.1 hypothetical protein AURANDRAFT_61881 [Aureococcus anophagefferens])

HSP 1 Score: 178.3 bits (451), Expect = 5.600e-41
Identity = 117/350 (33.43%), Postives = 157/350 (44.86%), Query Frame = 0
Query:   29 PLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPT----KFPITRIYRSED-GSPWSNVFTARLHKAVDQLCGGPGSW---ESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQ-YRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            PLS+ DL  F+ DGY LL  AF   VA  CRD +WR + +                                                    I+ DDP+TW      +  +  ++R  D G+PW+  ++ RL  A+DQLCG  G W   ++ GCGWW++TFP  ++                                      PW  +G WH+DG  Y HR + ++++G++PIFLFSD+   GGGTAL  GSH+ +A LL  AG +G+    +     A  +E    G EA+    VVET G AGDVM THPFLLH RS N   V             VRFMCHP+V L
Sbjct:  564 PLSADDLAQFVRDGYCLLPGAFPRDVAFDCRDALWRRVGD--------------------------------------------------LGIAADDPATWSLAPKGRLGLQDVFRESDLGAPWAECWSDRLRAALDQLCGA-GRWVDDDALGCGWWVVTFPGVANA-------------------------------------PWGAEGSWHVDGHGYAHR-VDSREIGVLPIFLFSDVAARGGGTALAPGSHRAVAELLWRAGAEGVPGPRL----SALAREAL--GAEALAGDAVVETRGRAGDVMLTHPFLLHARSKNLRDVDAAA---------VRFMCHPAVRL 809          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: POM70383.1 (hypothetical protein PHPALM_13187, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 177.9 bits (450), Expect = 7.300e-41
Identity = 114/340 (33.53%), Postives = 150/340 (44.12%), Query Frame = 0
Query:   27 ILPLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSWESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPS 367
            +LPL  + +E+FI DG+VLL RAF P+ A  CR+ IW+ + ++  T                                                    D STW  +  I  +Y +ED   W +V T RL +A+DQ+C G   WE FG GWWMITFP               D S P                      PW   G WH+DG      + +++ GL+ IFLFSDI  G GGTA+  GSHK++ARLL +  P+GM       KG A   +  +      +R  VVE  G+AGDVM  HPFLLH RS N  +   E          VR MC+P+
Sbjct:   28 VLPLDQQAIEAFIRDGFVLLPRAFSPSTAEKCRELIWQRLAQDNIT---------------------------------------------------KDSSTWVERHGIPELYTTEDDPVWGDVVTPRLKRAMDQIC-GKDRWEDFGLGWWMITFP---------------DQSEP----------------------PWGAAGKWHVDGASYQHHVDSKESGLLIIFLFSDIGPGEGGTAVSVGSHKWVARLLEKNEPRGM-------KGGAVSYQARQ-----FQRREVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVES---------VRIMCNPN 257          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: XP_024585382.1 (Phytanoyl-CoA dioxygenase [Plasmopara halstedii] >CEG49013.1 Phytanoyl-CoA dioxygenase [Plasmopara halstedii])

HSP 1 Score: 176.4 bits (446), Expect = 2.100e-40
Identity = 115/341 (33.72%), Postives = 146/341 (42.82%), Query Frame = 0
Query:   29 PLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSWESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            PL   +++SFI+DG+VLL++AF P  A  CR+ IW  + ++                                                       DPSTW  +  I  +Y  E+   W +V T RL  A+DQ+C G G WE FG GWWMITFP               + S P                      PW   G WH+DG      I +++ GLV IFLF+DI  G GGTAL  GSHK +ARLL    P+GM       KG A   E  +      E   VVE  G+AGDVM  HPFLLH RS N  +   +          VR MC+P+V L
Sbjct:   22 PLDQEEIKSFIHDGFVLLRKAFTPVTARKCRELIWERLAQDG---------------------------------------------------IGKDPSTWVERHGIPELYTVENNPVWDDVLTRRLKSAIDQIC-GQGRWEDFGLGWWMITFP---------------EQSKP----------------------PWDAAGKWHVDGASYQHHIDSKESGLVAIFLFTDINPGEGGTALSVGSHKNVARLLAVNEPRGM-------KGGAVSHEARK-----FEHQNVVEVNGKAGDVMLVHPFLLHARSKNLGQKGVDS---------VRIMCNPNVKL 252          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: ETP38866.1 (hypothetical protein F442_13606 [Phytophthora parasitica P10297])

HSP 1 Score: 176.0 bits (445), Expect = 2.800e-40
Identity = 115/344 (33.43%), Postives = 149/344 (43.31%), Query Frame = 0
Query:   26 EILPLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSWESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            E  PL    ++SF  DG+VLL+ AF  + A  CRD IW  +E++  T                                                    DPSTW  +  I  +Y +ED   WS+V T RL +A+ Q+C G   WE+FG GWWMITFP               D + P                      PW   G WH+DG      +  ++ GL+ IFLFSDI  G GGTAL  GSHK++ARLL++  P+GM       KG A   +  +       R  VVE  G+AGDV+  HPFLLH RS N  +   E          VR MC+P+V L
Sbjct:   25 EAAPLDQEAIDSFTRDGFVLLRDAFSSSTAEKCRDLIWTRLEQDGIT---------------------------------------------------KDPSTWVERHGIPELYTAEDNPVWSDVVTPRLKRAMHQIC-GKDRWENFGLGWWMITFP---------------DQAEP----------------------PWGAAGKWHVDGASYQHHVDNKEAGLLLIFLFSDIGPGEGGTALSVGSHKWVARLLQKNEPRGM-------KGGAVSYQARQ-----FRRREVVEVNGKAGDVVLVHPFLLHARSKNLGQKGVES---------VRIMCNPNVRL 258          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: KUF78976.1 (hypothetical protein AM587_10001433 [Phytophthora nicotianae])

HSP 1 Score: 176.0 bits (445), Expect = 2.800e-40
Identity = 115/344 (33.43%), Postives = 149/344 (43.31%), Query Frame = 0
Query:   26 EILPLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNVFTARLHKAVDQLCGGPGSWESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGGXXXXXXXXVRFMCHPSVSL 370
            E  PL    ++SF  DG+VLL+ AF  + A  CRD IW  +E++  T                                                    DPSTW  +  I  +Y +ED   WS+V T RL +A+ Q+C G   WE+FG GWWMITFP               D + P                      PW   G WH+DG      +  ++ GL+ IFLFSDI  G GGTAL  GSHK++ARLL++  P+GM       KG A   +  +       R  VVE  G+AGDV+  HPFLLH RS N  +   E          VR MC+P+V L
Sbjct:   25 EAAPLDQEAIDSFTRDGFVLLRDAFSSSTAEKCRDLIWTRLEQDGIT---------------------------------------------------KDPSTWVERHGIPELYTAEDNPVWSDVVTPRLKRAMHQIC-GKDRWENFGLGWWMITFP---------------DQAEP----------------------PWGAAGKWHVDGASYQHHVDNKEAGLLLIFLFSDIGPGEGGTALSVGSHKWVARLLQKNEPRGM-------KGGAVSYQARQ-----FRRREVVEVNGKAGDVVLVHPFLLHARSKNLGQKGVES---------VRIMCNPNVRL 258          
BLAST of NO22G01570 vs. NCBI_GenBank
Match: CBJ27190.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 175.6 bits (444), Expect = 3.600e-40
Identity = 112/350 (32.00%), Postives = 159/350 (45.43%), Query Frame = 0
Query:    5 DDSRGNDSVDGGTNIGPT-------ADGEILPLSSRDLESFINDGYVLLKRAFDPAVAAACRDEIWRVMEEETRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTVISRDDPSTWPTKFPITRIY------RSEDGSPWSNVFTARLHKAVDQLCGGPGSWESFGCGWWMITFPRGSSGEEGTNEGEREDYSSPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGLVPIFLFSDIRRGGGGTALCQGSHKYIARLLRE-AGPQGMDALEVIRKGQAWVKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSA 341
            D +R  + +D   +IGP        A    +PLS  D+ SF  +G+V+LKRAFDP VAAACR+ +W+ ++ +                                                   I R++P+TW  K  I  IY      +   G PW    + +L  AV+QL  G  SWE FGCGWWM+TFP                                     F  P PW  +G WHIDG +     H++++G++PIFLFSD+R+ GGGTA+ +GSHK +A++L + AG  G+   E+    +  +    ++         VVET G+AGDV+ THP LLH R A
Sbjct:    6 DANRTGEDID--LSIGPPQSQDSHGAGSSEVPLSPEDIRSFEENGFVMLKRAFDPDVAAACRESLWKRLKGDG--------------------------------------------------IRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQL-AGVDSWEEFGCGWWMVTFP------------------------------------GFAQP-PWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWDRAGTTGLTGPELSSAAREALLPAADDD--------VVETNGDAGDVLLTHPLLLHSRCA 257          
The following BLAST results are available for this feature:
BLAST of NO22G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQS06220.17.100e-4432.47hypothetical protein THRCLA_01738 [Thraustotheca c... [more]
XP_008874597.11.000e-4231.98hypothetical protein H310_10111 [Aphanomyces invad... [more]
OQR99363.13.900e-4232.46hypothetical protein ACHHYP_06947 [Achlya hypogyna... [more]
XP_009841218.11.100e-4131.68hypothetical protein H257_14967 [Aphanomyces astac... [more]
XP_009033885.15.600e-4133.43hypothetical protein AURANDRAFT_61881 [Aureococcus... [more]
POM70383.17.300e-4133.53hypothetical protein PHPALM_13187, partial [Phytop... [more]
XP_024585382.12.100e-4033.72Phytanoyl-CoA dioxygenase [Plasmopara halstedii] >... [more]
ETP38866.12.800e-4033.43hypothetical protein F442_13606 [Phytophthora para... [more]
KUF78976.12.800e-4033.43hypothetical protein AM587_10001433 [Phytophthora ... [more]
CBJ27190.13.600e-4032.00conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004104NSK004104Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01570.1NO22G01570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|105574gene_7170Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g78gene8917Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01570.1NO22G01570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01570 ID=NO22G01570|Name=NO22G01570|organism=Nannochloropsis oceanica|type=gene|length=2591bp
TCCATTTAATGTTGTTGTTGTTTCCTTTTTTACCTCGTTCGAAGGTCTTT
TTATTCAATTTCGCGGGTCGCTCATCGATTCTAGCTCATCTTCGCACACA
GTGTAGGGCGTAACGTTAGCGGGGCGGATTAGACCAGGCAGGAGCGGGAC
AAAGGGATTCCTCTTGAACAAGATAGGGGCATAATGCCTTGCACCCGCAG
CGAAAAAGAAAGAAAATACTTACGGAAAGCATCACGCGAGGTTACACAAC
CAGACGCTCGTAATTATGCGCTTGGAAGGAAGACGCGCATGTGGGATCGT
GCGAAGACCGGGAGGTTGGTGTCAATTTCTCCCTTCTCATTCACTCACTT
TCTTCATACGTAAACATTCACAGGGACGAGACCGTACTGCGCCAATATGC
ATTAGAGCTTCTCCAGTTGCCTTGGGACGTAGGCACTTTCCGCTCGCCCC
GACGTCCCTACCACCACCCGAAGgcaagaagccatgccccaccactccct
cccccattccccaaagccccccccactattccctaccccaacacccacat
gatgcacaagtaaaaggtctgactggaggaatgaatttggggccaggtgc
ccgactcaacccccctcgtacgatagagatgttgtcgtttcagcccatgc
tccgggcgtgtggcatgagggtgcaaggggtcgcacatttctctgggggc
aattagttgcctcctaaaggcactcgggtgacctatctcttcgagaaagg
cactaagcgggggactggcccaagccacatggcttgcgccctccttattc
ttgtgaagaattgcaagcgggtgcgatattacatggctgcttggttttgt
tcgatcccttttcttctctttcggaaggagtgaggagcagacattcaccc
ctttcctctaatgattttacaaaggcgagtctgatgggcatgtagggaat
ccaacatcgccttagacttcggaacattattcactttttgtcgcatgctc
aatggttgcacccattcacatgcacacagAGACGGAGCTTCGAGTGAATC
ATGACTCAGCACGATGACAGCAGAGGCAACGACAGCGTCGATGGTGGCAC
AAATATTGGGCCGACCGCAGATGGTGAAATTTTACCGCTGTCCTCTAGGG
ATTTGGAATCGTTCATCAATGACGGCTACGTCCTTCTTAAGCGAGCATTT
GACCCGGCAGTTGCTGCGGCGTGCCGAGATGAAATTTGGCGGGTGATGGA
GGAGGAGACAAGGACGAGAAAAGGCCGTACTACCAGTGAAAACAATGATG
CTACATCGACAACGAATATTACGCCCACCCTTTCCTCCTCCACCCCCTCG
TCCTTGGCACCACCAGCAGCAGCAGCTGCACCAAAACCACCAACACCGAG
CTGCACCGTTATCTCTCGAGACGATCCTTCCACCTGGCCGACCAAATTCC
CTATCACACGTATTTATCGATCTGAAGACGGCTCTCCTTGGTCGAATGTC
TTCACTGCTCGCTTACACAAGGCCGTCGATCAATTGTGCGGTGGCCCGGG
GAGCTGGGAGTCATTTGGATGTGGCTGGTGGATGATAACTTTCCCGAGGG
GCTCCAGCGGAGAGGAAGGTACGAACGAGGGAGAGAGGGAGGACTATTCT
TCTCCCTCTTCATGTTCCATACAGAGCTCTTCCGCTCCTCCGTCACCTTC
TTCGTCCTTCTACCCTCCCCACCCCTGGCGACTGGACGGGCACTGGCACA
TAGATGGCCAATACCGCCACCGATGCATCCACACCCAACAAGTCGGCCTC
GTCCCCATCTTCCTCTTTTCAGATATCAGACGAGGAGGAGGTGGGACGGC
GTTGTGTCAAGGCTCGCATAAGTATATAGCAAGGTTGTTGAGGGAGGCTG
GCCCCCAGGGGATGGATGCACTCGAAGTGATCAGGAAGGGCCAGGCGTGG
GTGAAGGAAAGGACGGAGGAAGGAAAGGAGGCAGTTGAGAGGTGTAGAGT
GGTGGAGACGGTGGGAGAGGCCGGTGATGTCATGTTCACGCACCCATTTT
TGTTGCATGGACGGAGTGCGAATTGTGCGAAGGTATCGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGCAAGGGGTGAGGTTTATGTGTCATCCCAGTGT
AAGCTTGACAAGAGTTCCGAGGGTAGGGGGGAGGGAGGAAGAAAATAAGC
AAGGGATGAGTGTGGTGGAGAGGGCGATTGTGGCGGGGTGGGAGGGGAAG
GAAGACGGGAGAGAGATGTTTTTGCACGATGAATGTTTGGCTGCGACTGA
GGGCTGGGAAGAGAGGAAAAGAAGACGACAAGCACAGGGCAGGAAGCAAA
AGAGAAGACTTAAAGAGGGAGGCGGGGAAGGCAACAACGACGAGGAAGCC
CTGGAAGCATTGCCCGTGGGGGTTGATGCAAATGTGATGTCAGTGATGGG
GATGACGGGCTTTGGTAGAGGTGGAGGGAAGAAGAGACTGCAGAGTTGAG
AAGAAAGAGACCAACAGCAACAACAATTGTAGCAGCAGCGACAACAGCAG
CGGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
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protein sequence of NO22G01570.1

>NO22G01570.1-protein ID=NO22G01570.1-protein|Name=NO22G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=483bp
MTQHDDSRGNDSVDGGTNIGPTADGEILPLSSRDLESFINDGYVLLKRAF
DPAVAAACRDEIWRVMEEETRTRKGRTTSENNDATSTTNITPTLSSSTPS
SLAPPAAAAAPKPPTPSCTVISRDDPSTWPTKFPITRIYRSEDGSPWSNV
FTARLHKAVDQLCGGPGSWESFGCGWWMITFPRGSSGEEGTNEGEREDYS
SPSSCSIQSSSAPPSPSSSFYPPHPWRLDGHWHIDGQYRHRCIHTQQVGL
VPIFLFSDIRRGGGGTALCQGSHKYIARLLREAGPQGMDALEVIRKGQAW
VKERTEEGKEAVERCRVVETVGEAGDVMFTHPFLLHGRSANCAKVSREGG
REGGREQGVRFMCHPSVSLTRVPRVGGREEENKQGMSVVERAIVAGWEGK
EDGREMFLHDECLAATEGWEERKRRRQAQGRKQKRRLKEGGGEGNNDEEA
LEALPVGVDANVMSVMGMTGFGRGGGKKRLQS*
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Synonyms
Publications