NO22G01560, NO22G01560 (gene) Nannochloropsis oceanica

Overview
NameNO22G01560
Unique NameNO22G01560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2786
Alignment locationchr22:459139..461924 +

Link to JBrowse

Properties
Property NameValue
DescriptionAtp-dependent rna helicase mitochondrial-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:459139..461924 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016817hydrolase activity, acting on acid anhydrides
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR022192SUV3_C
IPR001650Helicase_C
Homology
BLAST of NO22G01560 vs. NCBI_GenBank
Match: EWM21495.1 (atp-dependent rna helicase mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 739.6 bits (1908), Expect = 8.900e-210
Identity = 373/565 (66.02%), Postives = 425/565 (75.22%), Query Frame = 0
Query:  106 QMSDPYADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLGVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKLKPKEFMLVGEKRGGGKEGDREGGRMGSSRQRGAPSG 671
            Q+SDPYADFGAPH+WY QARKLKRSLILHVGPTN+GKTHEALER+Q AASGIYCGPLRLLAWEVYEKLN   V CELWTGQEVKE+EGSRH+SCTVEMAD++R YDVAVVDECQL+GDKERGWAWTR +LGLPA+E+HLCGSPAFVEIV ELA E+GD VEVR+Y RLSPL+PQ++AV SWAEI  GDCVVAFSRK+LF+LKNEIEVAT PRMKCCIVYGGLPPEARREQARLFNEEGSGWNV+VA+DAIGMGLNL+IGR+IFS+LEK+DGK +R+L+ AEIKQIAGRAGRF GK++                                                                                                       AQDLYFLCDLTDMLGVARL+EEIPLN +DR+TFCIAPVDTKQAELM++LRFFARQYQH+KEVKLG+++  E+VPVTPLELKHLEE+HAV+DVYLWLGLRFGED+F+E+++AEEAA RCSELIEEGLK LKPKEF LV +  GGG++G  E GR GS  +R   +G
Sbjct:   97 QISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQ-------------------------------------------------------------------------------------------------------AQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLV-KGEGGGEQGGEEWGRPGSDERRQIDAG 557          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256127.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Nelumbo nucifera])

HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116
Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635
            + D   PH WY  AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN   V C+L TGQE +EI+G++H S TVEMAD+T  Y  AV+DE Q++G K RG+++TRA+LGL A ELHLCG  A V ++ E+    GD+++V+ YERLSPL P +  +GS+++I+ GDC+V FSR+ +++LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG   R+LT +EIKQIAGRAGRF  K+  G V   +  D+ ++  +LK+    +ESAGL P+ + L ++++ +                  + G                   F  +L+ F+  A     +    YF+ +  +ML VA +I+E+PL   D++ FCI+PVD         L  FA+ Y  K  V+L         +VP T   LK LE IH V+D+Y+WL  R  ED F + E A      CS LIEE L++L
Sbjct:   58 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 539          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256128.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X2 [Nelumbo nucifera])

HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116
Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635
            + D   PH WY  AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN   V C+L TGQE +EI+G++H S TVEMAD+T  Y  AV+DE Q++G K RG+++TRA+LGL A ELHLCG  A V ++ E+    GD+++V+ YERLSPL P +  +GS+++I+ GDC+V FSR+ +++LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG   R+LT +EIKQIAGRAGRF  K+  G V   +  D+ ++  +LK+    +ESAGL P+ + L ++++ +                  + G                   F  +L+ F+  A     +    YF+ +  +ML VA +I+E+PL   D++ FCI+PVD         L  FA+ Y  K  V+L         +VP T   LK LE IH V+D+Y+WL  R  ED F + E A      CS LIEE L++L
Sbjct:   57 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 538          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256129.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X3 [Nelumbo nucifera])

HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116
Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635
            + D   PH WY  AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN   V C+L TGQE +EI+G++H S TVEMAD+T  Y  AV+DE Q++G K RG+++TRA+LGL A ELHLCG  A V ++ E+    GD+++V+ YERLSPL P +  +GS+++I+ GDC+V FSR+ +++LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG   R+LT +EIKQIAGRAGRF  K+  G V   +  D+ ++  +LK+    +ESAGL P+ + L ++++ +                  + G                   F  +L+ F+  A     +    YF+ +  +ML VA +I+E+PL   D++ FCI+PVD         L  FA+ Y  K  V+L         +VP T   LK LE IH V+D+Y+WL  R  ED F + E A      CS LIEE L++L
Sbjct:   51 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 532          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256130.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X4 [Nelumbo nucifera])

HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116
Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635
            + D   PH WY  AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN   V C+L TGQE +EI+G++H S TVEMAD+T  Y  AV+DE Q++G K RG+++TRA+LGL A ELHLCG  A V ++ E+    GD+++V+ YERLSPL P +  +GS+++I+ GDC+V FSR+ +++LKN+IE     +  C +VYG LPPE R  QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG   R+LT +EIKQIAGRAGRF  K+  G V   +  D+ ++  +LK+    +ESAGL P+ + L ++++ +                  + G                   F  +L+ F+  A     +    YF+ +  +ML VA +I+E+PL   D++ FCI+PVD         L  FA+ Y  K  V+L         +VP T   LK LE IH V+D+Y+WL  R  ED F + E A      CS LIEE L++L
Sbjct:   50 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 531          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_003559433.1 (ATP-dependent RNA helicase SUV3, mitochondrial [Brachypodium distachyon] >XP_024312581.1 ATP-dependent RNA helicase SUV3, mitochondrial [Brachypodium distachyon] >KQK13243.1 hypothetical protein BRADI_1g08847v3 [Brachypodium distachyon])

HSP 1 Score: 426.8 bits (1096), Expect = 1.300e-115
Identity = 234/525 (44.57%), Postives = 324/525 (61.71%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKL--GVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKK 634
            + D   PH WY  AR+ KR + LHVGPTN+GKTH AL+RL+A++SG+YCGPLRLLA EV ++LN   V C L TGQE +EIEG++H S TVE+AD+T  Y  AV+DE Q++G K RG+++TRA+LGL + ELH+CG PA V I+  +    GD+V V+ YERLSPL P +  +GS++ I+ GDC+V FSR+ +++LK +IE+    +  C +VYG LPPE R +QA +FN+E S  NVLVASDAIGMGLNL+I RIIFS+LEK+DG   R+LT  EIKQIAGRAGR+  K+ +G V      D+ ++  +LK    +IE AGL P+ + L ++++ +G                                       F  +L+ F+  A     +    YF+ D  DML VA +++E+PL   D++ FC++PVD +       L  FA  Y  K  V+L         +VP T  +LK LE +H V+++Y+WLG RF ED F + E A      CS LIEE L++
Sbjct:   53 FTDMTDPHMWYPNAREKKRKVFLHVGPTNSGKTHNALKRLEASSSGVYCGPLRLLAREVAKRLNNADVPCNLITGQEREEIEGAKHSSVTVEIADVTTEYQCAVIDEIQMIGCKTRGFSFTRALLGLCSDELHVCGDPAAVPIIQRMLEPTGDVVTVQYYERLSPLVPLKSTLGSFSNIKEGDCMVTFSRREIYKLKKKIEME--GKHLCSVVYGSLPPETRTKQATMFNDEASELNVLVASDAIGMGLNLNISRIIFSTLEKFDGVRMRELTVPEIKQIAGRAGRYGSKFPVGEVTCLHAEDLPLLHSSLKLPSPIIERAGLFPTFDLLSVYSRLHGTDF------------------------------------FHPILERFLEKA-----KLSPDYFIADCEDMLKVAAIVDELPLGLYDKYIFCLSPVDVRDDISTQGLIQFAGNYAKKGTVRLKERFTSGTLRVPKTHNQLKELESVHKVLELYVWLGYRF-EDSFPDRELAASQKSICSMLIEEYLER 533          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: PNT74145.1 (hypothetical protein BRADI_1g08847v3 [Brachypodium distachyon])

HSP 1 Score: 426.8 bits (1096), Expect = 1.300e-115
Identity = 234/525 (44.57%), Postives = 324/525 (61.71%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKL--GVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKK 634
            + D   PH WY  AR+ KR + LHVGPTN+GKTH AL+RL+A++SG+YCGPLRLLA EV ++LN   V C L TGQE +EIEG++H S TVE+AD+T  Y  AV+DE Q++G K RG+++TRA+LGL + ELH+CG PA V I+  +    GD+V V+ YERLSPL P +  +GS++ I+ GDC+V FSR+ +++LK +IE+    +  C +VYG LPPE R +QA +FN+E S  NVLVASDAIGMGLNL+I RIIFS+LEK+DG   R+LT  EIKQIAGRAGR+  K+ +G V      D+ ++  +LK    +IE AGL P+ + L ++++ +G                                       F  +L+ F+  A     +    YF+ D  DML VA +++E+PL   D++ FC++PVD +       L  FA  Y  K  V+L         +VP T  +LK LE +H V+++Y+WLG RF ED F + E A      CS LIEE L++
Sbjct:   21 FTDMTDPHMWYPNAREKKRKVFLHVGPTNSGKTHNALKRLEASSSGVYCGPLRLLAREVAKRLNNADVPCNLITGQEREEIEGAKHSSVTVEIADVTTEYQCAVIDEIQMIGCKTRGFSFTRALLGLCSDELHVCGDPAAVPIIQRMLEPTGDVVTVQYYERLSPLVPLKSTLGSFSNIKEGDCMVTFSRREIYKLKKKIEME--GKHLCSVVYGSLPPETRTKQATMFNDEASELNVLVASDAIGMGLNLNISRIIFSTLEKFDGVRMRELTVPEIKQIAGRAGRYGSKFPVGEVTCLHAEDLPLLHSSLKLPSPIIERAGLFPTFDLLSVYSRLHGTDF------------------------------------FHPILERFLEKA-----KLSPDYFIADCEDMLKVAAIVDELPLGLYDKYIFCLSPVDVRDDISTQGLIQFAGNYAKKGTVRLKERFTSGTLRVPKTHNQLKELESVHKVLELYVWLGYRF-EDSFPDRELAASQKSICSMLIEEYLER 501          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_004511385.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial [Cicer arietinum])

HSP 1 Score: 426.4 bits (1095), Expect = 1.700e-115
Identity = 234/525 (44.57%), Postives = 324/525 (61.71%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKK 634
            + D  +PH WY QARK +R +ILHVGPTN+GKTH+AL++LQ++ASGIYCGPLRLLAWEV ++LN   V C+L TGQE +E+EG+ H + TVEMAD++  Y  AV+DE Q+LG   RG+++TRA+LG+ A ELHLCG PA V ++ E+ N  GD VE++ YERLSPL P +  +GS +++R GDC+V FSRK +++LK  IE+    +  C +VYG LPPE R  QA +FN+  S  +VLVASDAIGMGLNL+I RIIFS+++K+DG   R LT  EIKQIAGRAGR+   + +G V   +  D+ ++  +L +   ++E AGL PS + L M+++ +                                  P S   F  +L+ F+  A     +  + YF+ +   +L VA +I+E PL  +D++ FCI+PVD         L  FA  Y  K  V+L         +VP TP  LK LE IH V+D+Y+WL  R  +D F + E A      CS LIEE L++
Sbjct:   56 FTDLTSPHTWYPQARKKRRRVILHVGPTNSGKTHQALKQLQSSASGIYCGPLRLLAWEVAKRLNKAKVPCDLITGQEREEVEGANHKAVTVEMADVSADYQCAVIDEIQMLGCNSRGYSFTRALLGIAADELHLCGDPAAVPLIQEILNITGDEVEIQFYERLSPLIPMKVPLGSLSDVRNGDCIVTFSRKDIYKLKKRIEIE--GKHLCSVVYGSLPPETRTRQASMFNDASSECDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEMRDLTVPEIKQIAGRAGRYGSNFPVGEVTCMDADDLPLLHSSLDSPSPILERAGLLPSFDLLYMYSRLH----------------------------------PQS--GFYEVLEHFIDNA-----KLSEKYFIVNCEQVLKVAAVIDEFPLGLRDKYLFCISPVDMDDEISSQGLTQFAENYAKKGLVRLREIFTPGTLQVPKTPCALKELESIHKVLDLYVWLSFRL-QDSFPDHELAASQKAICSMLIEEFLER 536          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: PRP83434.1 (ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Planoprotostelium fungivorum])

HSP 1 Score: 426.4 bits (1095), Expect = 1.700e-115
Identity = 231/533 (43.34%), Postives = 319/533 (59.85%), Query Frame = 0
Query:  117 PHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIA---------------GRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLGVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635
            PH WY  ARK+KR  +LHVGPTN+GKT+ ALERL  A +G+YCGPLRLLA EV+EKLN  GV C L TGQ+  E++ + H +CTVEM D+ R  +VAVVDE Q++G+++RGWAWTRA+LGL A E+HLCG  + +E++ ++ ++ GD + V  YER + L+  +   G    I  GDC++AFSRK L++ K++IE AT   +K CI+YGGLPPEARR+QA LFN+  SG++VLVASDAIGMGLNL+I RIIFSS+ K+DG   R L+ +E+KQIA               GRAGR+   Y  G V     G+   I + L+++ + +ESAGL P+ E L +F++                                             L++ F+  A+   S     YF+CD ++ML +A  IE +P++ KDR+TFC APVDT     MSYL  +A  Y +   V L V+V     P   +E+K LE  H + D+Y+WL  RF E  F E + A++      + I + L  L
Sbjct:  326 PHLWYVGARKMKRKFVLHVGPTNSGKTYSALERLATAKTGLYCGPLRLLASEVFEKLNAKGVPCNLVTGQQKIEVQDANHYACTVEMTDVRRHVEVAVVDEIQMIGNEDRGWAWTRAVLGLMADEVHLCGDTSALEVIRDMCDKTGDEMVVHHYERKTTLEVTKCVKGGLRGIERGDCIIAFSRKELYEWKSKIERAT--DLKVCIIYGGLPPEARRQQAELFNDPKSGYDVLVASDAIGMGLNLNIRRIIFSSIAKFDGNETRTLSASEVKQIAGDGSRFLESLSEIDSGRAGRYMSIYSSGEVTSFTPGENEYIKKCLESQIEPLESAGLAPNYEHLEIFSR---------------------------------------------LIEKFMEIATLSTS-----YFMCDHSEMLVIASAIETVPMSLKDRYTFCTAPVDTDSPMTMSYLTMYAGDYSYSPYVPLNVSVKKLSFPNPKMEIKELEMYHNICDLYVWLSFRFHE--FTERDKAQQTKMTIVQRIRKCLASL 804          
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_021828196.1 (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial isoform X1 [Prunus avium])

HSP 1 Score: 423.7 bits (1088), Expect = 1.100e-114
Identity = 227/526 (43.16%), Postives = 323/526 (61.41%), Query Frame = 0
Query:  111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635
            + D  +PH WY +AR  +R +ILH+GPTN+GKTH AL+RL+++ SGIYCGPLRLLAWEV ++LN   V C+L TGQE +EI+G++H + TVEMAD+T  Y  A++DE Q+LG K RG+++TRA+LG+ A ELHLCG PA V ++ ++    GD +EV  YERLSPL P +  +GS++ IR GDC+V FSR ++++LK EIE     +  C +VYG LPPE R  QA  FN+  S ++VLVASDAIGMGLNL+I RIIFS+++K+DG  NR LT AE+KQIAGRAGR+  K+ +G V      D+ ++  +L++    +ESAGL P+ + + M+++ +                                           L ++  H      ++  D YF+ +  ++L VA +I+E+PL  +D++ FCI+PVD         L  FA+ Y +   V+L         KVP T   LK LE IH V+D+Y+WL  R  E+ F + E A      CS LIE+ L++L
Sbjct:   62 FTDLTSPHTWYPKARSKQRKVILHMGPTNSGKTHNALKRLESSPSGIYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEIDGAKHTAVTVEMADVTSHYHCAIIDEIQMLGCKTRGFSFTRALLGISADELHLCGDPAVVPLIQKILKVTGDHIEVNFYERLSPLVPMKVPLGSFSNIRTGDCIVTFSRHKIYKLKKEIE--NGGKHLCSVVYGSLPPETRTRQATKFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFENRDLTVAEVKQIAGRAGRYGSKFPVGEVTCLNADDLPLLHSSLESPSPTLESAGLFPTFDLMYMYSRLH---------------------------------------PECGLYQILAHFVE--NAKLSDNYFIANCEEVLKVAAVIDELPLGLQDKYRFCISPVDMDDEISSQGLTQFAQSYANTGIVRLREIFTPGTLKVPQTEAALKELESIHKVLDLYVWLSFRL-EESFPDRELASSQKSMCSMLIEDFLERL 543          
The following BLAST results are available for this feature:
BLAST of NO22G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21495.18.900e-21066.02atp-dependent rna helicase mitochondrial-like prot... [more]
XP_010256127.15.700e-11644.87PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
XP_010256128.15.700e-11644.87PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
XP_010256129.15.700e-11644.87PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
XP_010256130.15.700e-11644.87PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
XP_003559433.11.300e-11544.57ATP-dependent RNA helicase SUV3, mitochondrial [Br... [more]
PNT74145.11.300e-11544.57hypothetical protein BRADI_1g08847v3 [Brachypodium... [more]
XP_004511385.11.700e-11544.57PREDICTED: ATP-dependent RNA helicase SUV3, mitoch... [more]
PRP83434.11.700e-11543.34ATP-dependent RNA helicase SUPV3L1, mitochondrial-... [more]
XP_021828196.11.100e-11443.16DExH-box ATP-dependent RNA helicase DExH16, mitoch... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004105NSK004105Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01560.1NO22G01560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|623645gene_7169Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g77gene8918Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01560.1NO22G01560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01560 ID=NO22G01560|Name=NO22G01560|organism=Nannochloropsis oceanica|type=gene|length=2786bp
GACGACAACCTCCCCGGCCCATCAGGAAAAGTCGTCAACTACACTCCTCT
GCTTCGCTCCACTATATACCACAACGACAGCGTTCGCTCACTACTACTCC
CCAACAATCTCATTCGTAGGCTTAGCCATGCTGCGGTGCTTGCCGTGGAG
ACTTTACGGCTACCGAAGGCTGGGAAAGACCCGCGTGAGAAGATGCTCCT
TGCTATCGTCATCGTCTTGCAGCCACCCCTGCTTCTATACGGCTGCCTTG
ATAAGCCCAACAATGAAAGCAGCAAGCCAAGAGAACATGCAATGCCCTAG
CCATCATCAGCAGCGCGCGTATCGCAGGACTCCTGCCGCCGTTGCCGCCG
CAGCCGGAGCCGCTGCCAGAGCAAAAGGAGCGGCCAAAGCGGACCGCGAC
CGTCGTCAAAGGCGTGGTAGAGATGCTGGGCAGGATCTAGAGCAAATGTC
TGACCCTTACGCTGATTTTGGTGCCCCACACGATTGGTACTCTCAAGCCC
GAAAGCTCAAGCGGAGCTTGATTTTGCACGTCGGGCCGACCAACGCAGGC
AAGACGCACGAGGCACTCGAACGGTTGCAGGCTGCGGCAAGTGGCATCTA
TTGCGGTCCCTTGCGGTTGCTCGCGTGGGAGGTGTATGAGAAGTTAAATA
TGAATGGTGTGCTCTGCGAGCTGTGGACGGGACAGGAAGTGAAGGAGATT
GAAGGGAGTCGGCACGTGAGCTGCACAGTCGAGATGGCAGACATAACAAG
GGTGTATGACGTGGCTGTGGTGGATGAGTGCCAGTTATTGGGAGACAAAG
AGgtacgtccaaattttctctagcggtgattgttgctcctctgtgcgtac
atgcagttgtcatttttattttgttaatccctccctccacccctccctcc
tctctccgtccctacagAGAGGCTGGGCCTGGACAAGGGCCATCTTAGGC
TTACCTGCCGTGGAGCTGCACTTGTGTGGCTCACCTGCCTTTGTTGAGAT
TGTGCACGAGCTTGCGAATGAATTGGGAGATATTGTGGAAGTCCGCAAAT
ATGAACGCTTAAGCCCTCTGCAACCACAAAGAGAAGCTGTGGGGAGTTGG
GCAGAGATAAGGCCTGGTGACTGCGTGGTGGCGTTTAGTCGGAAGAGGCT
CTTTCAGCTGAAGAATGAGATTGAGGTTGCGACATTTCCGAGGATGAAGT
GTTGCATTGTGTATGGGGGATTGCCCCCGGAGGCCAGGAGGGAGCAGGCA
CGGCTTTTCAATGAGGAGGGGAGTGGGTGGAATGTGCTGGTGGCGAGTGA
TGCGATCGgtgagcgagaagcacggagggaggaagggaggagggattgag
ggtttgtcagttctttttcgatataaatatatgtcgttattacggccatt
tgatcgcctctttgcgagatatatctttctccattatttaatctctttcc
tctgctctctttccctctttcaatcaccctcctcctcctagGCATGGGCC
TTAATCTTTCCATCGGCCGAATTATCTTCTCCTCTCTTGAAAAGTATGAC
GGCAAAACCAATCGTCAATTGACCCATGCAGAGATCAAGCAAATCGCTGG
GAGGGCCGGCCGATTTAAGGGAAAGTACGAGgtatgtcacaccaaaaata
atgaaattaagtcgaaagagaaaggattagttgcggatacatattttccc
tcaatccctttcccttgtttctttattcctcccctcgtcatcagATAGGA
ACAGTTGCAGGCCGGGAAGGCGGAGACGTCCGCATCATCTCCCGCGCATT
GAAAGCGGAGCACGACGTGATCGAGTCGGCGGGCCTAAAGCCCTCCAAAG
AACAGTTGCTGATGTTCGCCAAAGCCAATGGATTGAAGATAAGAGAGACC
GAAGAAGATTATGCGATGGCTTGGGAAGAGAAACGGCAAGGCGGTGAAGG
AAGGAGGGAGGAAGAAAGAGGAGGAGGAACCCCGAGTAGCTACACAGAAT
TCACTGTCTTGCTCAAATTATTTGTCCACGCCGCGTCTACCCTCGGCTCC
CGGGCCCAGGACCTTTATTTCCTGTGTGACCTTACTGACATGCTCGGGGT
TGCGAGACTCATCGAAGAAATACCCCTGAATTTCAAAGACCGCTTCACCT
TCTGTATCGCCCCTGTGGACACCAAGCAAGCCGAGCTTATGTCTTACCTT
CGTTTTTTCGCCCGGCAGTACCAACACAAAAAAGAAGTTAAATTGGGTGT
GAATGTACACTGGGAAAAAGTACCTGTCACACCGTTGGAACTCAAGCACT
TGGAAGAAATTCATGCGGTGGTCGATGTGTATTTATGGCTAGGCCTGAGA
TTTGGCGAGGACATTTTTATAGAAATAGAGGACGCGGAGGAGGCTGCGGA
ACGATGCAGTGAATTGATCGAGGAGGGCTTGAAGAAGCTGAAGCCCAAGG
AGTTCATGCTGGTGGGGGAAAAAAGAGGCGGAGGAAAGGAAGGAGACAGG
GAGGGGGGGAGGATGGGGTCATCCAGGCAACGGGGGGCGCCGTCCGGACG
ATGGAGAAAGGGAGGTGAAAAGAGATAGATTAAGGGAGGGAAGAAGGGAA
GTGTATATAAGTGGGTAGGGATATAAGAAGATTTTAGATCATACCAAAGT
TAACCACCCGGTAAAGATAAATTTTAGCTTTGACATTTCTCGCGTGAATA
TTCTTACTGCTGATTTAGGGCATTTTATCTACTCGTATTTGTGTTTGATT
TTTCATCTTATATGACATTTCGTTAGAAAATTACAT
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protein sequence of NO22G01560.1

>NO22G01560.1-protein ID=NO22G01560.1-protein|Name=NO22G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=680bp
MLRCLPWRLYGYRRLGKTRVRRCSLLSSSSCSHPCFYTAALISPTMKAAS
QENMQCPSHHQQRAYRRTPAAVAAAAGAAARAKGAAKADRDRRQRRGRDA
GQDLEQMSDPYADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERL
QAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCT
VEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAF
VEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSR
KRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLV
ASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGK
YEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLK
IRETEEDYAMAWEEKRQGGEGRREEERGGGTPSSYTEFTVLLKLFVHAAS
TLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAEL
MSYLRFFARQYQHKKEVKLGVNVHWEKVPVTPLELKHLEEIHAVVDVYLW
LGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKLKPKEFMLVGEKRGGGK
EGDREGGRMGSSRQRGAPSGRWRKGGEKR*
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Synonyms
Publications