NO22G01560, NO22G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01560 vs. NCBI_GenBank
Match: EWM21495.1 (atp-dependent rna helicase mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 739.6 bits (1908), Expect = 8.900e-210 Identity = 373/565 (66.02%), Postives = 425/565 (75.22%), Query Frame = 0 Query: 106 QMSDPYADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLGVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKLKPKEFMLVGEKRGGGKEGDREGGRMGSSRQRGAPSG 671 Q+SDPYADFGAPH+WY QARKLKRSLILHVGPTN+GKTHEALER+Q AASGIYCGPLRLLAWEVYEKLN V CELWTGQEVKE+EGSRH+SCTVEMAD++R YDVAVVDECQL+GDKERGWAWTR +LGLPA+E+HLCGSPAFVEIV ELA E+GD VEVR+Y RLSPL+PQ++AV SWAEI GDCVVAFSRK+LF+LKNEIEVAT PRMKCCIVYGGLPPEARREQARLFNEEGSGWNV+VA+DAIGMGLNL+IGR+IFS+LEK+DGK +R+L+ AEIKQIAGRAGRF GK++ AQDLYFLCDLTDMLGVARL+EEIPLN +DR+TFCIAPVDTKQAELM++LRFFARQYQH+KEVKLG+++ E+VPVTPLELKHLEE+HAV+DVYLWLGLRFGED+F+E+++AEEAA RCSELIEEGLK LKPKEF LV + GGG++G E GR GS +R +G Sbjct: 97 QISDPYADFGAPHNWYVQARKLKRSLILHVGPTNSGKTHEALERMQRAASGIYCGPLRLLAWEVYEKLNSKDVPCELWTGQEVKEVEGSRHMSCTVEMADVSRTYDVAVVDECQLIGDKERGWAWTRVVLGLPAIEVHLCGSPAFVEIVQELAREIGDDVEVREYARLSPLKPQKKAVASWAEIEAGDCVVAFSRKKLFELKNEIEVATSPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVMVATDAIGMGLNLAIGRVIFSALEKFDGKVDRRLSDAEIKQIAGRAGRFNGKFQ-------------------------------------------------------------------------------------------------------AQDLYFLCDLTDMLGVARLVEEIPLNLRDRYTFCIAPVDTKQAELMAFLRFFARQYQHRKEVKLGMDILSERVPVTPLELKHLEEVHAVLDVYLWLGLRFGEDVFVEMDEAEEAAVRCSELIEEGLKTLKPKEFTLV-KGEGGGEQGGEEWGRPGSDERRQIDAG 557
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256127.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Nelumbo nucifera]) HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116 Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635 + D PH WY AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN V C+L TGQE +EI+G++H S TVEMAD+T Y AV+DE Q++G K RG+++TRA+LGL A ELHLCG A V ++ E+ GD+++V+ YERLSPL P + +GS+++I+ GDC+V FSR+ +++LKN+IE + C +VYG LPPE R QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG R+LT +EIKQIAGRAGRF K+ G V + D+ ++ +LK+ +ESAGL P+ + L ++++ + + G F +L+ F+ A + YF+ + +ML VA +I+E+PL D++ FCI+PVD L FA+ Y K V+L +VP T LK LE IH V+D+Y+WL R ED F + E A CS LIEE L++L Sbjct: 58 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 539
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256128.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X2 [Nelumbo nucifera]) HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116 Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635 + D PH WY AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN V C+L TGQE +EI+G++H S TVEMAD+T Y AV+DE Q++G K RG+++TRA+LGL A ELHLCG A V ++ E+ GD+++V+ YERLSPL P + +GS+++I+ GDC+V FSR+ +++LKN+IE + C +VYG LPPE R QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG R+LT +EIKQIAGRAGRF K+ G V + D+ ++ +LK+ +ESAGL P+ + L ++++ + + G F +L+ F+ A + YF+ + +ML VA +I+E+PL D++ FCI+PVD L FA+ Y K V+L +VP T LK LE IH V+D+Y+WL R ED F + E A CS LIEE L++L Sbjct: 57 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 538
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256129.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X3 [Nelumbo nucifera]) HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116 Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635 + D PH WY AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN V C+L TGQE +EI+G++H S TVEMAD+T Y AV+DE Q++G K RG+++TRA+LGL A ELHLCG A V ++ E+ GD+++V+ YERLSPL P + +GS+++I+ GDC+V FSR+ +++LKN+IE + C +VYG LPPE R QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG R+LT +EIKQIAGRAGRF K+ G V + D+ ++ +LK+ +ESAGL P+ + L ++++ + + G F +L+ F+ A + YF+ + +ML VA +I+E+PL D++ FCI+PVD L FA+ Y K V+L +VP T LK LE IH V+D+Y+WL R ED F + E A CS LIEE L++L Sbjct: 51 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 532
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_010256130.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform X4 [Nelumbo nucifera]) HSP 1 Score: 427.9 bits (1099), Expect = 5.700e-116 Identity = 236/526 (44.87%), Postives = 330/526 (62.74%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635 + D PH WY AR+ KR++ILHVGPTN+GKTH AL++L+ ++SGIYCGPLRLLAWEV ++LN V C+L TGQE +EI+G++H S TVEMAD+T Y AV+DE Q++G K RG+++TRA+LGL A ELHLCG A V ++ E+ GD+++V+ YERLSPL P + +GS+++I+ GDC+V FSR+ +++LKN+IE + C +VYG LPPE R QA +FN+E S ++VLVASDAIGMGLNL+I RIIFS+L+K+DG R+LT +EIKQIAGRAGRF K+ G V + D+ ++ +LK+ +ESAGL P+ + L ++++ + + G F +L+ F+ A + YF+ + +ML VA +I+E+PL D++ FCI+PVD L FA+ Y K V+L +VP T LK LE IH V+D+Y+WL R ED F + E A CS LIEE L++L Sbjct: 50 FTDLTRPHTWYPNARRKKRNIILHVGPTNSGKTHHALKQLERSSSGIYCGPLRLLAWEVAKRLNKAHVPCDLITGQEKEEIDGAKHKSVTVEMADVTSDYHCAVIDEIQMVGCKTRGFSFTRALLGLAADELHLCGDAAVVPLIQEILEVTGDVIKVQYYERLSPLIPSKVPLGSFSKIQTGDCIVTFSRREIYRLKNDIE--NGGKHLCSVVYGSLPPETRTRQATMFNDESSQFDVLVASDAIGMGLNLNISRIIFSTLKKFDGTDMRELTVSEIKQIAGRAGRFGSKFPCGEVTCIDAEDLPLLHSSLKSPSPDLESAGLFPTFDLLFLYSRLH-----------------PKMG-------------------FHQILENFLENA-----KLSSNYFIANCEEMLKVAAVIDELPLQLHDKYLFCISPVDMNDDISSQGLVQFAQTYARKGIVRLREIFTPGTLQVPKTQTALKELESIHKVLDLYVWLSFRL-EDSFPDRELASSQKSICSLLIEEFLERL 531
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_003559433.1 (ATP-dependent RNA helicase SUV3, mitochondrial [Brachypodium distachyon] >XP_024312581.1 ATP-dependent RNA helicase SUV3, mitochondrial [Brachypodium distachyon] >KQK13243.1 hypothetical protein BRADI_1g08847v3 [Brachypodium distachyon]) HSP 1 Score: 426.8 bits (1096), Expect = 1.300e-115 Identity = 234/525 (44.57%), Postives = 324/525 (61.71%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKL--GVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKK 634 + D PH WY AR+ KR + LHVGPTN+GKTH AL+RL+A++SG+YCGPLRLLA EV ++LN V C L TGQE +EIEG++H S TVE+AD+T Y AV+DE Q++G K RG+++TRA+LGL + ELH+CG PA V I+ + GD+V V+ YERLSPL P + +GS++ I+ GDC+V FSR+ +++LK +IE+ + C +VYG LPPE R +QA +FN+E S NVLVASDAIGMGLNL+I RIIFS+LEK+DG R+LT EIKQIAGRAGR+ K+ +G V D+ ++ +LK +IE AGL P+ + L ++++ +G F +L+ F+ A + YF+ D DML VA +++E+PL D++ FC++PVD + L FA Y K V+L +VP T +LK LE +H V+++Y+WLG RF ED F + E A CS LIEE L++ Sbjct: 53 FTDMTDPHMWYPNAREKKRKVFLHVGPTNSGKTHNALKRLEASSSGVYCGPLRLLAREVAKRLNNADVPCNLITGQEREEIEGAKHSSVTVEIADVTTEYQCAVIDEIQMIGCKTRGFSFTRALLGLCSDELHVCGDPAAVPIIQRMLEPTGDVVTVQYYERLSPLVPLKSTLGSFSNIKEGDCMVTFSRREIYKLKKKIEME--GKHLCSVVYGSLPPETRTKQATMFNDEASELNVLVASDAIGMGLNLNISRIIFSTLEKFDGVRMRELTVPEIKQIAGRAGRYGSKFPVGEVTCLHAEDLPLLHSSLKLPSPIIERAGLFPTFDLLSVYSRLHGTDF------------------------------------FHPILERFLEKA-----KLSPDYFIADCEDMLKVAAIVDELPLGLYDKYIFCLSPVDVRDDISTQGLIQFAGNYAKKGTVRLKERFTSGTLRVPKTHNQLKELESVHKVLELYVWLGYRF-EDSFPDRELAASQKSICSMLIEEYLER 533
BLAST of NO22G01560 vs. NCBI_GenBank
Match: PNT74145.1 (hypothetical protein BRADI_1g08847v3 [Brachypodium distachyon]) HSP 1 Score: 426.8 bits (1096), Expect = 1.300e-115 Identity = 234/525 (44.57%), Postives = 324/525 (61.71%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKL--GVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKK 634 + D PH WY AR+ KR + LHVGPTN+GKTH AL+RL+A++SG+YCGPLRLLA EV ++LN V C L TGQE +EIEG++H S TVE+AD+T Y AV+DE Q++G K RG+++TRA+LGL + ELH+CG PA V I+ + GD+V V+ YERLSPL P + +GS++ I+ GDC+V FSR+ +++LK +IE+ + C +VYG LPPE R +QA +FN+E S NVLVASDAIGMGLNL+I RIIFS+LEK+DG R+LT EIKQIAGRAGR+ K+ +G V D+ ++ +LK +IE AGL P+ + L ++++ +G F +L+ F+ A + YF+ D DML VA +++E+PL D++ FC++PVD + L FA Y K V+L +VP T +LK LE +H V+++Y+WLG RF ED F + E A CS LIEE L++ Sbjct: 21 FTDMTDPHMWYPNAREKKRKVFLHVGPTNSGKTHNALKRLEASSSGVYCGPLRLLAREVAKRLNNADVPCNLITGQEREEIEGAKHSSVTVEIADVTTEYQCAVIDEIQMIGCKTRGFSFTRALLGLCSDELHVCGDPAAVPIIQRMLEPTGDVVTVQYYERLSPLVPLKSTLGSFSNIKEGDCMVTFSRREIYKLKKKIEME--GKHLCSVVYGSLPPETRTKQATMFNDEASELNVLVASDAIGMGLNLNISRIIFSTLEKFDGVRMRELTVPEIKQIAGRAGRYGSKFPVGEVTCLHAEDLPLLHSSLKLPSPIIERAGLFPTFDLLSVYSRLHGTDF------------------------------------FHPILERFLEKA-----KLSPDYFIADCEDMLKVAAIVDELPLGLYDKYIFCLSPVDVRDDISTQGLIQFAGNYAKKGTVRLKERFTSGTLRVPKTHNQLKELESVHKVLELYVWLGYRF-EDSFPDRELAASQKSICSMLIEEYLER 501
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_004511385.1 (PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial [Cicer arietinum]) HSP 1 Score: 426.4 bits (1095), Expect = 1.700e-115 Identity = 234/525 (44.57%), Postives = 324/525 (61.71%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKK 634 + D +PH WY QARK +R +ILHVGPTN+GKTH+AL++LQ++ASGIYCGPLRLLAWEV ++LN V C+L TGQE +E+EG+ H + TVEMAD++ Y AV+DE Q+LG RG+++TRA+LG+ A ELHLCG PA V ++ E+ N GD VE++ YERLSPL P + +GS +++R GDC+V FSRK +++LK IE+ + C +VYG LPPE R QA +FN+ S +VLVASDAIGMGLNL+I RIIFS+++K+DG R LT EIKQIAGRAGR+ + +G V + D+ ++ +L + ++E AGL PS + L M+++ + P S F +L+ F+ A + + YF+ + +L VA +I+E PL +D++ FCI+PVD L FA Y K V+L +VP TP LK LE IH V+D+Y+WL R +D F + E A CS LIEE L++ Sbjct: 56 FTDLTSPHTWYPQARKKRRRVILHVGPTNSGKTHQALKQLQSSASGIYCGPLRLLAWEVAKRLNKAKVPCDLITGQEREEVEGANHKAVTVEMADVSADYQCAVIDEIQMLGCNSRGYSFTRALLGIAADELHLCGDPAAVPLIQEILNITGDEVEIQFYERLSPLIPMKVPLGSLSDVRNGDCIVTFSRKDIYKLKKRIEIE--GKHLCSVVYGSLPPETRTRQASMFNDASSECDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEMRDLTVPEIKQIAGRAGRYGSNFPVGEVTCMDADDLPLLHSSLDSPSPILERAGLLPSFDLLYMYSRLH----------------------------------PQS--GFYEVLEHFIDNA-----KLSEKYFIVNCEQVLKVAAVIDEFPLGLRDKYLFCISPVDMDDEISSQGLTQFAENYAKKGLVRLREIFTPGTLQVPKTPCALKELESIHKVLDLYVWLSFRL-QDSFPDHELAASQKAICSMLIEEFLER 536
BLAST of NO22G01560 vs. NCBI_GenBank
Match: PRP83434.1 (ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Planoprotostelium fungivorum]) HSP 1 Score: 426.4 bits (1095), Expect = 1.700e-115 Identity = 231/533 (43.34%), Postives = 319/533 (59.85%), Query Frame = 0 Query: 117 PHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIA---------------GRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLGVNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635 PH WY ARK+KR +LHVGPTN+GKT+ ALERL A +G+YCGPLRLLA EV+EKLN GV C L TGQ+ E++ + H +CTVEM D+ R +VAVVDE Q++G+++RGWAWTRA+LGL A E+HLCG + +E++ ++ ++ GD + V YER + L+ + G I GDC++AFSRK L++ K++IE AT +K CI+YGGLPPEARR+QA LFN+ SG++VLVASDAIGMGLNL+I RIIFSS+ K+DG R L+ +E+KQIA GRAGR+ Y G V G+ I + L+++ + +ESAGL P+ E L +F++ L++ F+ A+ S YF+CD ++ML +A IE +P++ KDR+TFC APVDT MSYL +A Y + V L V+V P +E+K LE H + D+Y+WL RF E F E + A++ + I + L L Sbjct: 326 PHLWYVGARKMKRKFVLHVGPTNSGKTYSALERLATAKTGLYCGPLRLLASEVFEKLNAKGVPCNLVTGQQKIEVQDANHYACTVEMTDVRRHVEVAVVDEIQMIGNEDRGWAWTRAVLGLMADEVHLCGDTSALEVIRDMCDKTGDEMVVHHYERKTTLEVTKCVKGGLRGIERGDCIIAFSRKELYEWKSKIERAT--DLKVCIIYGGLPPEARRQQAELFNDPKSGYDVLVASDAIGMGLNLNIRRIIFSSIAKFDGNETRTLSASEVKQIAGDGSRFLESLSEIDSGRAGRYMSIYSSGEVTSFTPGENEYIKKCLESQIEPLESAGLAPNYEHLEIFSR---------------------------------------------LIEKFMEIATLSTS-----YFMCDHSEMLVIASAIETVPMSLKDRYTFCTAPVDTDSPMTMSYLTMYAGDYSYSPYVPLNVSVKKLSFPNPKMEIKELEMYHNICDLYVWLSFRFHE--FTERDKAQQTKMTIVQRIRKCLASL 804
BLAST of NO22G01560 vs. NCBI_GenBank
Match: XP_021828196.1 (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial isoform X1 [Prunus avium]) HSP 1 Score: 423.7 bits (1088), Expect = 1.100e-114 Identity = 227/526 (43.16%), Postives = 323/526 (61.41%), Query Frame = 0 Query: 111 YADFGAPHDWYSQARKLKRSLILHVGPTNAGKTHEALERLQAAASGIYCGPLRLLAWEVYEKLNMNGVLCELWTGQEVKEIEGSRHVSCTVEMADITRVYDVAVVDECQLLGDKERGWAWTRAILGLPAVELHLCGSPAFVEIVHELANELGDIVEVRKYERLSPLQPQREAVGSWAEIRPGDCVVAFSRKRLFQLKNEIEVATFPRMKCCIVYGGLPPEARREQARLFNEEGSGWNVLVASDAIGMGLNLSIGRIIFSSLEKYDGKTNRQLTHAEIKQIAGRAGRFKGKYEIGTVAGREGGDVRIISRALKAEHDVIESAGLKPSKEQLLMFAKANGLKIRETEEDYAMAWEEKRQGGEGXXXXXXXXXTPSSYTEFTVLLKLFVHAASTLGSRAQDLYFLCDLTDMLGVARLIEEIPLNFKDRFTFCIAPVDTKQAELMSYLRFFARQYQHKKEVKLG--VNVHWEKVPVTPLELKHLEEIHAVVDVYLWLGLRFGEDIFIEIEDAEEAAERCSELIEEGLKKL 635 + D +PH WY +AR +R +ILH+GPTN+GKTH AL+RL+++ SGIYCGPLRLLAWEV ++LN V C+L TGQE +EI+G++H + TVEMAD+T Y A++DE Q+LG K RG+++TRA+LG+ A ELHLCG PA V ++ ++ GD +EV YERLSPL P + +GS++ IR GDC+V FSR ++++LK EIE + C +VYG LPPE R QA FN+ S ++VLVASDAIGMGLNL+I RIIFS+++K+DG NR LT AE+KQIAGRAGR+ K+ +G V D+ ++ +L++ +ESAGL P+ + + M+++ + L ++ H ++ D YF+ + ++L VA +I+E+PL +D++ FCI+PVD L FA+ Y + V+L KVP T LK LE IH V+D+Y+WL R E+ F + E A CS LIE+ L++L Sbjct: 62 FTDLTSPHTWYPKARSKQRKVILHMGPTNSGKTHNALKRLESSPSGIYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEIDGAKHTAVTVEMADVTSHYHCAIIDEIQMLGCKTRGFSFTRALLGISADELHLCGDPAVVPLIQKILKVTGDHIEVNFYERLSPLVPMKVPLGSFSNIRTGDCIVTFSRHKIYKLKKEIE--NGGKHLCSVVYGSLPPETRTRQATKFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFENRDLTVAEVKQIAGRAGRYGSKFPVGEVTCLNADDLPLLHSSLESPSPTLESAGLFPTFDLMYMYSRLH---------------------------------------PECGLYQILAHFVE--NAKLSDNYFIANCEEVLKVAAVIDELPLGLQDKYRFCISPVDMDDEISSQGLTQFAQSYANTGIVRLREIFTPGTLKVPQTEAALKELESIHKVLDLYVWLSFRL-EESFPDRELASSQKSMCSMLIEDFLERL 543 The following BLAST results are available for this feature:
BLAST of NO22G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01560 ID=NO22G01560|Name=NO22G01560|organism=Nannochloropsis oceanica|type=gene|length=2786bpback to top protein sequence of NO22G01560.1 >NO22G01560.1-protein ID=NO22G01560.1-protein|Name=NO22G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=680bpback to top Synonyms
Publications
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