NO22G01520, NO22G01520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01520 vs. NCBI_GenBank
Match: EWM21476.1 (Mitotic checkpoint protein PRCC [Nannochloropsis gaditana]) HSP 1 Score: 218.4 bits (555), Expect = 5.400e-53 Identity = 250/475 (52.63%), Postives = 280/475 (58.95%), Query Frame = 0 Query: 69 LPAHIQAALMRAVPLRRARDSSKGVTGGRFLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESKAIVSRQAAGATGLFALLPKPKAEEALDLALVKSN----------KAAAERKKVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-LHPSLMASAKAAALPRVTIVKKDVPGIS-PTMAAPAAIPTXXXXXXGAESAQFSSVHHPSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVHNVHAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEFGQPLTGAESRRQKQRQKRELAAGNLSAVSQLAGGQVMEVAARDEAWDPFRHGPPKKKEKVSIAAMFYDTKTGETITTTEASKTHKRKHQINSLAIQAAEREADLLEGKARGMQSKAQTQGKYGW 532 LP+HIQAALMRA PLRR+ +G G +SD XXXXXXXXXXXXXXXXXXXXXXXXXXX AESKA+ RQAAGATGLFALLPKPK E+A++ AL KS A E V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LH SLMA A AAALPRV+I + + G++ P APAA GAE Q S+ ++ N + A R D+F PL+ SRRQKQR +RELAAGNLSAVS+L GGQV+EVA R+E+WDP+R+GPPKKKEKVSIAA FYDTKTGET+TTTEAS+THKR+HQIN+LAIQAAEREADLLEGKAR MQSKAQTQGKYGW Sbjct: 76 LPSHIQAALMRAAPLRRSTGQKEGPVTG--VSD----DXXXXXXXXXXXXXXXXXXXXXXXXXXXREQVAESKAVAKRQAAGATGLFALLPKPKVEKAMEKALKKSGXXXXXXXXXXXANMEADAVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLLHSSLMAGATAAALPRVSI-SQGMRGLAIPAPTAPAA-------AVGAEIRQPSTSLSVAASSELPASGSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAELDAYYAAEASRQPPLQMSPGSCLQPHAQE-------------------------------DDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKL-GGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
BLAST of NO22G01520 vs. NCBI_GenBank
Match: XP_005856276.1 (hypothetical protein NGA_2119710, partial [Nannochloropsis gaditana CCMP526] >EKU20092.1 hypothetical protein NGA_2119710, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 197.6 bits (501), Expect = 9.800e-47 Identity = 103/126 (81.75%), Postives = 116/126 (92.06%), Query Frame = 0 Query: 405 DEFGQPLTGAESRRQKQRQKRELAAGNLSAVSQLAGGQVMEVAARDEAWDPFRHGPPKKKEKVSIAAMFYDTKTGETITTTEASKTHKRKHQINSLAIQAAEREADLLEGKARGMQSKAQTQGKYG 531 D+F PL+ SRRQKQR +RELAAGNLSAVS+L GGQV+EVA R+E+WDP+R+GPPKKKEKVSIAA FYDTKTGET+TTTEAS+THKR+HQIN+LAIQAAEREADLLEGKAR MQSKAQTQGKYG Sbjct: 120 DDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKL-GGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYG 244
BLAST of NO22G01520 vs. NCBI_GenBank
Match: XP_009036672.1 (hypothetical protein AURANDRAFT_64044 [Aureococcus anophagefferens] >EGB08682.1 hypothetical protein AURANDRAFT_64044 [Aureococcus anophagefferens]) HSP 1 Score: 83.2 bits (204), Expect = 2.700e-12 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 0 Query: 422 RQKRELAAGNLSAVSQLAGGQVMEVAARDEAWDPFRHGPPKKKEKVSIAAMFYDTKTGETITTTEASKTHKRKHQINSLAIQAAEREADLLEGKARGMQSKAQTQGKYGW 532 R RE A+ + +V +E+ +R+E PP +VSIAA FY+TKTG T T+T+A+KT +RKHQINSLAI AAERE +LL+ K + ++K +T +YGW Sbjct: 217 RALREFASVHGPSVDIAEARGHVELRSREELIAASDARPP----EVSIAAQFYNTKTGATTTSTKATKTQRRKHQINSLAISAAERELELLDKKGKSNKTKHETNARYGW 322
BLAST of NO22G01520 vs. NCBI_GenBank
Match: CBN79222.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 74.3 bits (181), Expect = 1.300e-9 Identity = 47/119 (39.50%), Postives = 65/119 (54.62%), Query Frame = 0 Query: 416 SRRQKQRQKRELAAGNLSAVSQLAGGQVMEVAARDEAWDPFRHGP---PKKKEKVSIAAMFYDTKTGETITTTEASKTHKRKHQINSLAIQAAEREADLLEGKARGMQSKAQTQGKYGW 532 +RR+ + +R LA GNL A+ + VM++ ++P R P +E+ I + YD TG+T+ T E + KRKHQIN LA QAA E DL+E +KAQT KYGW Sbjct: 163 TRRKGRDMERALARGNLGALG--SEMPVMDLEQGSNEYNPLRTKPTTAAMNQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 279 The following BLAST results are available for this feature:
BLAST of NO22G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01520 ID=NO22G01520|Name=NO22G01520|organism=Nannochloropsis oceanica|type=gene|length=1720bpback to top protein sequence of NO22G01520.1 >NO22G01520.1-protein ID=NO22G01520.1-protein|Name=NO22G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bpback to top Synonyms
Publications
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