NO22G01360, NO22G01360 (gene) Nannochloropsis oceanica

Overview
NameNO22G01360
Unique NameNO22G01360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length756
Alignment locationchr22:403366..404121 -

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Properties
Property NameValue
DescriptionPalmitoyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:403366..404121 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001594Znf_DHHC_palmitoyltrfase
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO22G01360 vs. NCBI_GenBank
Match: XP_005856272.1 (dhhc zinc finger domain containing protein [Nannochloropsis gaditana CCMP526] >EKU20088.1 dhhc zinc finger domain containing protein [Nannochloropsis gaditana CCMP526] >EWM21471.1 dhhc zinc finger domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 296.6 bits (758), Expect = 7.300e-77
Identity = 152/254 (59.84%), Postives = 174/254 (68.50%), Query Frame = 0
Query:    1 MPLFDAAFIERGACGVERKSKREERLVNKDRLCCGRPQYVGRMILLCGHKDSRFPLHCLVGPDWPCMLITYALVSAPTISFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQ---EETLEDSEAGAAQSHANVTISNSDIRGAPLT------AAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHIIFVGCVTGMSALNDAFH 246
            MP+ DA  IER ACGV R SKREERL+  +  C G PQY+GRMILLCG KD  FP  CLVGPDWPCMLITY +V  P+I FLIL+               F LTL FFSLTACSDPGIV+ QL    EE   D E+G    H N   + S     P+       AA+  G S+A NP  QIPCSRCELSRP+GASHCY+CEVCV DLDHHCPWTGKCIG+KN+ FFY FLTFLT+HIIF+G VT M+A+N+ FH
Sbjct:    1 MPVLDAEPIER-ACGVLRASKREERLIGTNGQCSGNPQYIGRMILLCGRKDGIFPFQCLVGPDWPCMLITYTMVCVPSIFFLILVAPRVSSVIVWVGLASFMLTLFFFSLTACSDPGIVFWQLPNGGEERSIDPESGTVVLHNNDCGNGSISATLPVVDQSTSLAASSQGFSSARNPVPQIPCSRCELSRPMGASHCYECEVCVKDLDHHCPWTGKCIGRKNLQFFYLFLTFLTVHIIFLGSVTAMTAINNTFH 253          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: ETK84322.1 (hypothetical protein L915_10701 [Phytophthora parasitica] >ETL37761.1 hypothetical protein L916_10592 [Phytophthora parasitica] >ETP14128.1 hypothetical protein F441_10898 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 130.2 bits (326), Expect = 9.100e-27
Identity = 74/204 (36.27%), Postives = 100/204 (49.02%), Query Frame = 0
Query:   33 CCGRPQYVGRMILLC--GHKDSRFPLHCLVGPDWPCMLITYALVSAPTISFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHIIFVGCV 235
            CC R   VGR  +LC    +   FP  C VGP W CML+TY L   P   F                     LT   F++ ACSDPG+V++ L+                   ++N      PL      G          I C++CE+ RP+ ASHC DC VCV +LDHHCPWTGKC+G++ + +FY FLTF+++H + +G V
Sbjct:   31 CCVR---VGRTHVLCSLSRRYGYFPSTCHVGPHWGCMLVTYCLAIGPAFFF---FADDMLLGLKVALVVSICLTTASFTMVACSDPGVVFQDLE-------------------VAN------PLQGDVETG----------IICAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAV 193          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: XP_008906942.1 (hypothetical protein PPTG_12999 [Phytophthora parasitica INRA-310] >ETI44314.1 hypothetical protein F443_10979 [Phytophthora parasitica P1569] >ETM53169.1 hypothetical protein L914_03340 [Phytophthora parasitica] >ETN07657.1 hypothetical protein PPTG_12999 [Phytophthora parasitica INRA-310] >ETO72967.1 hypothetical protein F444_11048 [Phytophthora parasitica P1976] >ETP42194.1 hypothetical protein F442_10873 [Phytophthora parasitica P10297])

HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26
Identity = 73/204 (35.78%), Postives = 97/204 (47.55%), Query Frame = 0
Query:   33 CCGRPQYVGRMILLC--GHKDSRFPLHCLVGPDWPCMLITYALVSAPTISFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHIIFVGCV 235
            CC R   VGR  +LC    +   FP  C VGP W CML+TY L   P   F                     LT   F++ ACSDPG+V++ L+        A A Q      I                             C++CE+ RP+ ASHC DC VCV +LDHHCPWTGKC+G++ + +FY FLTF+++H + +G V
Sbjct:   31 CCVR---VGRTHVLCSLSRRYGYFPSTCHVGPHWGCMLVTYCLAIGPAFFF---FADDMLLGLKVALVVSICLTTASFTMVACSDPGVVFQDLE-------VANALQGDVETGII----------------------------CAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAV 193          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: CCI49021.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 129.4 bits (324), Expect = 1.600e-26
Identity = 73/196 (37.24%), Postives = 100/196 (51.02%), Query Frame = 0
Query:   40 VGRMILLCGHKD---SRFPLHCLVGPDWPCMLITYALVSAPTI---SFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHII 230
            +G   +LC +       FP  C +GPD   ML+TY ++ AP I   S   L                  LTLI FS+TACSDPG+++ + +  +LE    G+                 P+T       S        I C+ C +SRPV ASHCYDC  C+ +LDHHCPWTGKCIGK+ +Y+FY+FL  +T H++
Sbjct:   65 IGSTRVLCTYTSGYIGYFPTTCHIGPDRFWMLLTYTIILAPIIIVASVTQLGETSIELACQTALAVTTFLTLILFSMTACSDPGMIFEERKNISLEVYTPGS----------------PPVTLLTAPMESEDEPVQEMIVCASCHISRPVNASHCYDCNACILELDHHCPWTGKCIGKRTLYWFYAFLASITCHLV 244          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: CCI49022.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 129.4 bits (324), Expect = 1.600e-26
Identity = 73/196 (37.24%), Postives = 100/196 (51.02%), Query Frame = 0
Query:   40 VGRMILLCGHKD---SRFPLHCLVGPDWPCMLITYALVSAPTI---SFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHII 230
            +G   +LC +       FP  C +GPD   ML+TY ++ AP I   S   L                  LTLI FS+TACSDPG+++ + +  +LE    G+                 P+T       S        I C+ C +SRPV ASHCYDC  C+ +LDHHCPWTGKCIGK+ +Y+FY+FL  +T H++
Sbjct:   59 IGSTRVLCTYTSGYIGYFPTTCHIGPDRFWMLLTYTIILAPIIIVASVTQLGETSIELACQTALAVTTFLTLILFSMTACSDPGMIFEERKNISLEVYTPGS----------------PPVTLLTAPMESEDEPVQEMIVCASCHISRPVNASHCYDCNACILELDHHCPWTGKCIGKRTLYWFYAFLASITCHLV 238          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: CCI49023.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 129.4 bits (324), Expect = 1.600e-26
Identity = 73/196 (37.24%), Postives = 100/196 (51.02%), Query Frame = 0
Query:   40 VGRMILLCGHKD---SRFPLHCLVGPDWPCMLITYALVSAPTI---SFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHII 230
            +G   +LC +       FP  C +GPD   ML+TY ++ AP I   S   L                  LTLI FS+TACSDPG+++ + +  +LE    G+                 P+T       S        I C+ C +SRPV ASHCYDC  C+ +LDHHCPWTGKCIGK+ +Y+FY+FL  +T H++
Sbjct:   29 IGSTRVLCTYTSGYIGYFPTTCHIGPDRFWMLLTYTIILAPIIIVASVTQLGETSIELACQTALAVTTFLTLILFSMTACSDPGMIFEERKNISLEVYTPGS----------------PPVTLLTAPMESEDEPVQEMIVCASCHISRPVNASHCYDCNACILELDHHCPWTGKCIGKRTLYWFYAFLASITCHLV 208          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: ETL90904.1 (hypothetical protein L917_10498 [Phytophthora parasitica])

HSP 1 Score: 128.3 bits (321), Expect = 3.500e-26
Identity = 78/232 (33.62%), Postives = 103/232 (44.40%), Query Frame = 0
Query:    5 DAAFIERGACGVERKSKREERLVNKDRLCCGRPQYVGRMILLC--GHKDSRFPLHCLVGPDWPCMLITYALVSAPTISFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHIIFVGCV 235
            DA    R    VE  +K         R C      VGR  +LC    +   FP  C VGP W CML+TY L   P   F                     LT   F++ ACSDPG+V++ L+        A A Q      I                             C++CE+ RP+ ASHC DC VCV +LDHHCPWTGKC+G++ + +FY FLTF+++H + +G V
Sbjct:    4 DAELSARQGEEVEPTAKYTPSTRTNGRFCV----RVGRTHVLCSLSRRYGYFPSTCHVGPHWGCMLVTYCLAIGPAFFF---FADDMLLGLKVALVVSICLTTASFTMVACSDPGVVFQDLE-------VANALQGDVETGII----------------------------CAQCEVRRPLNASHCSDCGVCVRELDHHCPWTGKCVGERTIKWFYVFLTFISLHCMLIGAV 193          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: GBG26830.1 (Palmitoyltransferase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 127.1 bits (318), Expect = 7.700e-26
Identity = 76/224 (33.93%), Postives = 105/224 (46.88%), Query Frame = 0
Query:   15 GVERKSKREERLVNKDRLCCGRPQYVGRMILLCGH-KDSRFPLHCLVGPDWPCMLITYALVSAPTISFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHIIFVGCVTGM 238
            G E     E+  ++K    C   +  G+  L+ G  +  RFP HC++GPDW C  IT  L+  P++  +                  F   L  F LTA SDPGI+ RQ Q E     E   A++      S   +RG                    + C+RC + RP  A+HCYDC+ C+ + DHHCPWTG CIGK N+ FF+ FL+ L  H +FV  V  +
Sbjct:   33 GPEDSEPAEDEALDKASRWCVCKKVDGQHFLVYGKPRRQRFPFHCVLGPDWWCSFITITLIMIPSVFAVWGAAASMGPFVELLGMISFATCLGSFMLTAFSDPGIIKRQTQAEL----EQALAENP-----SGQHVRG--------------------LFCNRCNIYRPYTATHCYDCDACIEEHDHHCPWTGHCIGKNNLTFFWVFLSSLLFHFVFVVIVLNL 227          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: CCA20515.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 125.2 bits (313), Expect = 2.900e-25
Identity = 72/200 (36.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query:   40 VGRMILLCGHKD---SRFPLHCLVGPDWPCMLITYALVSAPTISFLILIXXXXXXXXXXXXXXXFTL------TLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQ-IPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHII 230
            +G   +LC +       FP    +GPD   ML+TY ++ AP I   I+                 TL      TLIFFS+TACSDPG+++ + +  ++E    G       +T+S + I                + P  + I C+ C + RPV ASHCYDC  C+ +LDHHCPWTGKCIGK+ +Y+FY+FL  +T H++
Sbjct:   62 IGSTRVLCTYTSGYIGYFPTTFHIGPDRFWMLLTYTIILAPII---IVASVTQLGNTTTELACQITLIVTTFFTLIFFSMTACSDPGMIFEERKNISVEVYAPGCTP----ITLSTAPI-------------EIEVEPVDEMIVCASCHILRPVNASHCYDCNACILELDHHCPWTGKCIGKRTLYWFYAFLVSITCHLV 241          
BLAST of NO22G01360 vs. NCBI_GenBank
Match: XP_008611379.1 (hypothetical protein SDRG_07329 [Saprolegnia diclina VS20] >EQC35095.1 hypothetical protein SDRG_07329 [Saprolegnia diclina VS20])

HSP 1 Score: 122.1 bits (305), Expect = 2.500e-24
Identity = 63/177 (35.59%), Postives = 82/177 (46.33%), Query Frame = 0
Query:   54 FPLHCLVGPDWPCMLITYALVSAPTISFLILIXXXXXXXXXXXXXXXFTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIRGAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDHHCPWTGKCIGKKNVYFFYSFLTFLTIHIIF 231
            FP  C VGP+WPCM  T+AL+ AP  SF+                    LT + F++ ACSDPGI+         ED                                         + C+ C + RP  A HCY+CEVC+  LDHHCPWTGKCIGK+ + +FY FLT +T+H+ F
Sbjct:   57 FPSVCHVGPNWPCMTFTFALILAP--SFICSFDRNITAWVIAVLVLSIVLTFLSFAMVACSDPGIIREDYVNPAGEDE---------------------------------------GVLCAHCRIRRPANAVHCYECEVCIDGLDHHCPWTGKCIGKRTLKWFYLFLTMITLHLTF 192          
The following BLAST results are available for this feature:
BLAST of NO22G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856272.17.300e-7759.84dhhc zinc finger domain containing protein [Nannoc... [more]
ETK84322.19.100e-2736.27hypothetical protein L915_10701 [Phytophthora para... [more]
XP_008906942.11.200e-2635.78hypothetical protein PPTG_12999 [Phytophthora para... [more]
CCI49021.11.600e-2637.24unnamed protein product [Albugo candida][more]
CCI49022.11.600e-2637.24unnamed protein product [Albugo candida][more]
CCI49023.11.600e-2637.24unnamed protein product [Albugo candida][more]
ETL90904.13.500e-2633.62hypothetical protein L917_10498 [Phytophthora para... [more]
GBG26830.17.700e-2633.93Palmitoyltransferase [Aurantiochytrium sp. FCC1311... [more]
CCA20515.12.900e-2536.00conserved hypothetical protein [Albugo laibachii N... [more]
XP_008611379.12.500e-2435.59hypothetical protein SDRG_07329 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004126NSK004126Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01360.1NO22G01360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595746gene_7142Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g54gene8940Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01360.1NO22G01360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01360 ID=NO22G01360|Name=NO22G01360|organism=Nannochloropsis oceanica|type=gene|length=756bp
ATGCCCCTCTTTGACGCCGCGTTCATCGAGCGGGGGGCGTGCGGCGTGGA
GCGGAAAAGCAAGCGGGAGGAACGGCTCGTGAATAAGGATCGACTATGCT
GCGGAAGGCCTCAGTACGTTGGCCGCATGATATTATTGTGCGGGCACAAG
GACAGTAGGTTTCCCCTCCACTGCCTGGTGGGACCAGACTGGCCCTGCAT
GCTCATCACGTATGCCTTGGTGAGCGCACCCACCATCTCGTTCCTTATAT
TGATTGCCGCCCGCATAAGCTGGATCATTGTCATGTTGGGCCTTGTATCC
TTCACCCTCACTCTCATCTTTTTCAGCCTGACTGCCTGCTCCGACCCCGG
CATCGTCTACCGGCAGCTCCAGGAAGAGACGCTAGAAGACTCCGAAGCCG
GGGCGGCACAAAGTCATGCCAACGTTACAATTAGCAACAGCGATATCAGA
GGCGCTCCATTGACTGCAGCGGCCGGTGCGGGCACATCCACCGCGCTAAA
CCCAACAGCGCAAATCCCTTGCTCGCGATGCGAACTGTCCCGGCCTGTGG
GTGCCTCGCACTGTTACGATTGCGAGGTGTGCGTGACCGACTTGGATCAT
CACTGCCCTTGGACGGGTAAGTGTATTGGGAAGAAAAATGTATATTTCTT
CTATTCTTTTTTGACGTTTTTGACAATTCACATTATTTTTGTTGGCTGCG
TGACTGGAATGAGCGCTTTAAATGACGCATTTCATTTGGATGGCGGGAAT
CCATGA
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protein sequence of NO22G01360.1

>NO22G01360.1-protein ID=NO22G01360.1-protein|Name=NO22G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=252bp
MPLFDAAFIERGACGVERKSKREERLVNKDRLCCGRPQYVGRMILLCGHK
DSRFPLHCLVGPDWPCMLITYALVSAPTISFLILIAARISWIIVMLGLVS
FTLTLIFFSLTACSDPGIVYRQLQEETLEDSEAGAAQSHANVTISNSDIR
GAPLTAAAGAGTSTALNPTAQIPCSRCELSRPVGASHCYDCEVCVTDLDH
HCPWTGKCIGKKNVYFFYSFLTFLTIHIIFVGCVTGMSALNDAFHLDGGN
P*
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Synonyms
Publications