NO22G01330, NO22G01330 (gene) Nannochloropsis oceanica

Overview
NameNO22G01330
Unique NameNO22G01330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1552
Alignment locationchr22:397360..398911 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:397360..398911 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO22G01330 vs. NCBI_GenBank
Match: EWM21484.1 (hypothetical protein Naga_100019g52 [Nannochloropsis gaditana])

HSP 1 Score: 355.9 bits (912), Expect = 8.800e-95
Identity = 179/217 (82.49%), Postives = 193/217 (88.94%), Query Frame = 0
Query:    1 MPVFSARSLVLLAMLLSTCYAFLLPGVPKLAKTVVNVGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADEDFNDEVSKLANA 218
            MP    R+L+L  +LLS+C AFL+P  PK  ++V+ VGEGSTHVKEL  LNPEDY+A+GLAMCYKIN GGKLDE LVMEPLTAGTLECLALGVPTSYKRV+GLTC +LF GEDLR P  +NIEALR LAKGETVSECE+MLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSF DNVKQDKSIDVYGRADEDFNDEV KLANA
Sbjct:    1 MPSLVTRNLILSLVLLSSCSAFLMPNAPKPTRSVLQVGEGSTHVKELVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDEVDKLANA 217          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: CEM07801.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 193.4 bits (490), Expect = 7.600e-46
Identity = 96/167 (57.49%), Postives = 123/167 (73.65%), Query Frame = 0
Query:   48 APLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADEDFNDEVSKL 215
            APL  +DYIA+GLA CY +N   KL+E  V+EPLTAGTLE +  GV TSY+RV+ LT  DLF G+D+ +P G  + A+  +  GE     E +  R +AAARTF+RR EAQ++ LGEVADDFNF+TE+KR+LNQ FEPSFDDNVKQ  SIDVYGR + + +DE ++L
Sbjct:   69 APLKSDDYIALGLACCYLLNDKNKLEEYWVIEPLTAGTLETIDRGVDTSYRRVMALTLGDLFEGDDVNSPTGARLSAVEPMISGEEARFSEALTERVLAAARTFRRRPEAQLLDLGEVADDFNFSTERKRILNQKFEPSFDDNVKQHSSIDVYGRTESESSDEQAEL 235          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: CBN75610.1 (conserved hypothetical protei [Ectocarpus siliculosus])

HSP 1 Score: 165.6 bits (418), Expect = 1.700e-37
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 0
Query:   47 LAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLA--LGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207
            L PL  +DY+A GLA C+ +N   KLDE  V EPLTA TLE +A    + TSYKRV      D+F G   R P GI ++ L+ L    T   CEN + R++AAART+KRRVEAQ+   G++ + FNF+TE+KR+LN  FEPSFDDNVKQDKSIDVYGR +E+
Sbjct:   74 LVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPAR-PTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEE 234          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: XP_005706104.1 (hypothetical protein Gasu_30230 [Galdieria sulphuraria] >EME29584.1 hypothetical protein Gasu_30230 [Galdieria sulphuraria])

HSP 1 Score: 141.0 bits (354), Expect = 4.500e-30
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 0
Query:   50 LNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGR-ADEDFNDEVSKLANA 218
            + P++Y  +GLA C++ +S GKL E +V+EP+   TLE +  GVPTSYKR++    +        RA +  +I    A  + E VS CEN   R  AA RT++ R+EA+ I LGEV    NF+T  KRVLN+ FEPSF+DNVKQD SIDVYGR  DE+   E+ KL NA
Sbjct:   75 VKPDEYTVLGLAFCFQRDSNGKLQELVVIEPVPTSTLETILQGVPTSYKRLVATVYS--------RAMDISSIPP--AFVEDERVSFCENYSERLQAATRTYRARLEAKKIQLGEVYVTINFSTSPKRVLNEKFEPSFEDNVKQDISIDVYGRKKDEEVKSEIEKLYNA 233          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: OSX77157.1 (hypothetical protein BU14_0159s0012 [Porphyra umbilicalis])

HSP 1 Score: 118.2 bits (295), Expect = 3.100e-23
Identity = 80/172 (46.51%), Postives = 105/172 (61.05%), Query Frame = 0
Query:   54 DYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLE-CLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRR-VEAQIIPLGEV--ADD--FNFNTEK-KRVLNQVFEPSFDDNVKQDKSIDVYGRADEDFN-DEVSKLANA 218
            DY  VGLA+CY+ N   KLD  LV+EPL+ GTLE     G PTSYKR++G T   L        P+  + E      +G++ S  E+   R  AAARTFKRR +   I+ +GEV  A+D    F T+  +R+LN+ +EP FDDNVKQDK+IDVYGR +E+    +V KL NA
Sbjct:   48 DYCPVGLAVCYQRNQNNKLDAVLVVEPLSTGTLENVTGTGQPTSYKRILGATIEGL--------PDNPS-ELPEDFLQGDSASFSEDFAERMCAAARTFKRRPISKGILGVGEVKTAEDGTLTFCTDGIQRILNEEWEPKFDDNVKQDKTIDVYGRGEEEGGAADVQKLYNA 210          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: EFJ07938.1 (hypothetical protein SELMODRAFT_429288 [Selaginella moellendorffii])

HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0
Query:   37 VGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVE----AQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207
            +GE  T+       NP+D++ +GL  C+  +S GKL +  V+EP+ AG LEC+  G  T YK V  +  +     +  + PE +   A            CE+   R+  AAR++ R        + IPLG V  DFN+N E KRVLN+V   +  DN+KQD SIDVYGR  +D
Sbjct:   65 IGENPTN-------NPDDFVVLGLGHCFIEDSNGKLQDHFVLEPIGAGALECMENGGKTCYKHVASMHLSTALAQDHSQLPEELRSGAF-----------CEDFAFRTKCAARSWMRDYPQEKIVRYIPLGTVRSDFNYNLEDKRVLNKVNIVTDADNIKQDMSIDVYGRKKDD 220          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: XP_002982748.1 (uncharacterized protein LOC9662093 [Selaginella moellendorffii] >EFJ15993.1 hypothetical protein SELMODRAFT_422124 [Selaginella moellendorffii])

HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0
Query:   37 VGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVE----AQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207
            +GE  T+       NP+D++ +GL  C+  +S GKL +  V+EP+ AG LEC+  G  T YK V  +  +     +  + PE +   A            CE+   R+  AAR++ R        + IPLG V  DFN+N E KRVLN+V   +  DN+KQD SIDVYGR  +D
Sbjct:   65 IGENPTN-------NPDDFVVLGLGHCFIEDSNGKLQDHFVLEPIGAGALECMENGGKTCYKHVASMHLSTALAQDHSQLPEELRSGAF-----------CEDFAFRTKCAARSWMRDYPQEKIVRYIPLGTVRSDFNYNLEDKRVLNKVNIVTDADNIKQDMSIDVYGRKKDD 220          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: PNH08110.1 (hypothetical protein TSOC_005358 [Tetrabaena socialis])

HSP 1 Score: 108.2 bits (269), Expect = 3.200e-20
Identity = 66/163 (40.49%), Postives = 87/163 (53.37%), Query Frame = 0
Query:   48 APLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQ----IIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207
            A +  + Y+ +G+A C+K   GG L   LV+EPL+A +LECLA G  TS+K V G+T  D         PE              T   CEN   R  AAART+++    +    I+PLG+   +FNF+ E KR+LN     S  DN+KQD SIDVYGR   D
Sbjct:   48 AAITEDAYMVLGMAQCFK-KDGGTLSPVLVVEPLSASSLECLANGARTSFKMVTGVTYKDAMNRNRAALPESFG-----------TALFCENFAFRCEAAARTWQQSHAQENLMDIVPLGKARGNFNFSLEDKRILNMENVVSDSDNIKQDLSIDVYGRKKAD 198          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: OWY66670.1 (hypothetical protein B7486_35395 [cyanobacterium TDX16])

HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19
Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   50 LNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQ-IIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQ 194
            L+PEDY+A+GLA C+ +   G++ +  ++EP+ +  LE +A G+PTSYK V   T   +  G+ L+ P G    A  +   G+          R++AAART+K R  A+ +IPLG   +DFN++TE+KRVLN     S DDNVKQ
Sbjct:   13 LSPEDYVAIGLATCF-VKEDGEVRDLEIIEPIPSAALEAIAKGIPTSYKLVSATTLGTVLAGDKLQIPAGFPTSAQFSDDFGQ----------RAIAAARTYKSRTVAKDLIPLGTTREDFNYSTERKRVLNMKRVVSKDDNVKQ 146          
BLAST of NO22G01330 vs. NCBI_GenBank
Match: XP_002956430.1 (hypothetical protein VOLCADRAFT_107210 [Volvox carteri f. nagariensis] >EFJ42574.1 hypothetical protein VOLCADRAFT_107210 [Volvox carteri f. nagariensis])

HSP 1 Score: 105.5 bits (262), Expect = 2.100e-19
Identity = 74/181 (40.88%), Postives = 98/181 (54.14%), Query Frame = 0
Query:   31 AKTVVNVGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQ-----IIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207
            A+  V V   +T V E      E Y  VGLA C++  +GG L+  LV+EPL+A +LECLA G  TSYK V G++      G+ +     +  +A R          CEN   R  AAART+ +R  AQ     I+PLG+   +FNF+ E KR+LN     +  DN+KQD SIDVYGR   D
Sbjct:  793 ARRTVRVMAYATDVPE------EAYACVGLAQCFR-KTGGGLEPVLVIEPLSASSLECLANGARTSYKMVTGVS-----FGDAMNRNRDVLPDAFR------DAPFCENYEFRCEAAARTW-QRPHAQDNLMDIVPLGKARSNFNFSLEDKRILNMDNVVNDSDNIKQDMSIDVYGRKKAD 954          
The following BLAST results are available for this feature:
BLAST of NO22G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21484.18.800e-9582.49hypothetical protein Naga_100019g52 [Nannochlorops... [more]
CEM07801.17.600e-4657.49unnamed protein product [Vitrella brassicaformis C... [more]
CBN75610.11.700e-3754.32conserved hypothetical protei [Ectocarpus siliculo... [more]
XP_005706104.14.500e-3047.93hypothetical protein Gasu_30230 [Galdieria sulphur... [more]
OSX77157.13.100e-2346.51hypothetical protein BU14_0159s0012 [Porphyra umbi... [more]
EFJ07938.11.400e-2037.36hypothetical protein SELMODRAFT_429288 [Selaginell... [more]
XP_002982748.11.400e-2037.36uncharacterized protein LOC9662093 [Selaginella mo... [more]
PNH08110.13.200e-2040.49hypothetical protein TSOC_005358 [Tetrabaena socia... [more]
OWY66670.11.200e-1941.38hypothetical protein B7486_35395 [cyanobacterium T... [more]
XP_002956430.12.100e-1940.88hypothetical protein VOLCADRAFT_107210 [Volvox car... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004130NSK004130Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01330.1NO22G01330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595734gene_7136Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g52gene8942Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01330.1NO22G01330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01330 ID=NO22G01330|Name=NO22G01330|organism=Nannochloropsis oceanica|type=gene|length=1552bp
GGGCAACAAGCAACTTGGAGCTTCCGACCGACTCTTTGCGTCCACATTGG
TCACGCCCTAGGGTGCGAACGTGCAAAGCGCTGGGCGAATCACCCCGCTT
TCTATCTCGCTTCGGGACCGAGCTATATTGTAAACAACCAGCGAATCCGG
CGGGGCCTCCGCCACCACAGCTTTGGACTCGCTAGTTCTTGGGCCTCATT
GCTCCCTCCTTACCCCCAACTACACAACCCTCCCACAGAGCCCGACCAGA
TACCATGCCTGTCTTTTCAGCCCGAAGTCTTGTGCTGCTTGCCATGCTCC
TTTCGACGTGCTATGCGTTTTTGCTGCCTGGCGTGCCCAAgtaagttggt
tgttgtttgttggaacaaggacgacggggttgaagcgaagtcaagacaac
atgaccccgggggctcacctctcttccccccaacccttcacagGTTGGCA
AAAACAGTAGTGAATGTTGGAGAGGGTAGCACTCACGTGAAGGAGCTAGC
Ggtaagtttacatgactgagatgccggctgaatgggcgcagtctttcaaa
acgatttctggatattttttcaccgccttcaccctcctatccacccgctc
agCCCCTGAACCCGGAGGACTACATTGCCGTTGGCTTGGCTATGTGCTAC
AAGATCAACAGCGGAGGCAAGCTCGATGgtaggtgtcctcggtttccctt
cgtgtctctgtctcgtcctgtctccgaaatggacaaggccccagctgtcg
cattctgggtagacgctacactcctctacagctgggctgttcctggtggc
gaagacaaattgcatgcaaacaaatgtggcctaatacgttcatcaccgac
caagagccctcatccccccttttctgacacctcttttctcttcccaacct
ctcctcccttccccacagAGGCGTTGGTGATGGAACCTCTCACGGCCGGC
ACTCTCGAATGCCTGGCACTGGGCGTGCCCACGTCCTACAAGCGTGTGAT
CGGCTTGACCTGCGCGGATTTGTTCCTCGGAGAGGATTTGCGGGCACCGG
AGGGGATTAACATCGAGGCTTTGCGGGCGCTTGCTAAGGGGGAGACTGTG
TCGGAGTGCGAGAACATGCTGATTCGATCAATGGCGGCGGCACGTACTTT
CAAGCGTCGCGTAGAGGCGCAGATCATTCCTTTGGGTGAAGTAGCGGATG
ATTTCAATTTTAACACGGAGAAAAAGCGGGTGCTGAATCAGGTGTTCGAA
CCCTCCTTCGACGACAATGTCAAGCAAGACAAGAGCATCGACGTCTATGG
CCGTGCTGACGAGGATTTTAATGACGAGGTCTCCAAACTTGCCAACGCCT
AACCTCAAAGAAAGGCAAGGACATTTTTGAACAGAAAAAGGAGGGAGGAG
AGAAGGGCAGGAGAGGGCCCAGTGTTATTCCTAGACGACGAAGAGGAAGG
GCGCGTTTACCGATCCACTAAAAGAATGAGAACCGGCCCACCAGAAATAG
GCAGCCATGAAAGATTTAAAAAAGACAAGAGTCTGCAAAGATGTCGGTGG
AT
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protein sequence of NO22G01330.1

>NO22G01330.1-protein ID=NO22G01330.1-protein|Name=NO22G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=218bp
MPVFSARSLVLLAMLLSTCYAFLLPGVPKLAKTVVNVGEGSTHVKELAPL
NPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRV
IGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAART
FKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVY
GRADEDFNDEVSKLANA*
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Synonyms
Publications