NO22G01330, NO22G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO22G01330 vs. NCBI_GenBank
Match: EWM21484.1 (hypothetical protein Naga_100019g52 [Nannochloropsis gaditana]) HSP 1 Score: 355.9 bits (912), Expect = 8.800e-95 Identity = 179/217 (82.49%), Postives = 193/217 (88.94%), Query Frame = 0 Query: 1 MPVFSARSLVLLAMLLSTCYAFLLPGVPKLAKTVVNVGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADEDFNDEVSKLANA 218 MP R+L+L +LLS+C AFL+P PK ++V+ VGEGSTHVKEL LNPEDY+A+GLAMCYKIN GGKLDE LVMEPLTAGTLECLALGVPTSYKRV+GLTC +LF GEDLR P +NIEALR LAKGETVSECE+MLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSF DNVKQDKSIDVYGRADEDFNDEV KLANA Sbjct: 1 MPSLVTRNLILSLVLLSSCSAFLMPNAPKPTRSVLQVGEGSTHVKELVALNPEDYVAIGLAMCYKINDGGKLDEVLVMEPLTAGTLECLALGVPTSYKRVMGLTCGELFNGEDLRNPSDVNIEALRPLAKGETVSECEDMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFADNVKQDKSIDVYGRADEDFNDEVDKLANA 217
BLAST of NO22G01330 vs. NCBI_GenBank
Match: CEM07801.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 193.4 bits (490), Expect = 7.600e-46 Identity = 96/167 (57.49%), Postives = 123/167 (73.65%), Query Frame = 0 Query: 48 APLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADEDFNDEVSKL 215 APL +DYIA+GLA CY +N KL+E V+EPLTAGTLE + GV TSY+RV+ LT DLF G+D+ +P G + A+ + GE E + R +AAARTF+RR EAQ++ LGEVADDFNF+TE+KR+LNQ FEPSFDDNVKQ SIDVYGR + + +DE ++L Sbjct: 69 APLKSDDYIALGLACCYLLNDKNKLEEYWVIEPLTAGTLETIDRGVDTSYRRVMALTLGDLFEGDDVNSPTGARLSAVEPMISGEEARFSEALTERVLAAARTFRRRPEAQLLDLGEVADDFNFSTERKRILNQKFEPSFDDNVKQHSSIDVYGRTESESSDEQAEL 235
BLAST of NO22G01330 vs. NCBI_GenBank
Match: CBN75610.1 (conserved hypothetical protei [Ectocarpus siliculosus]) HSP 1 Score: 165.6 bits (418), Expect = 1.700e-37 Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 0 Query: 47 LAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLA--LGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207 L PL +DY+A GLA C+ +N KLDE V EPLTA TLE +A + TSYKRV D+F G R P GI ++ L+ L T CEN + R++AAART+KRRVEAQ+ G++ + FNF+TE+KR+LN FEPSFDDNVKQDKSIDVYGR +E+ Sbjct: 74 LVPLEDDDYVAFGLACCFVMNDNLKLDEYYVYEPLTAATLETIASSQSLETSYKRVTAFHAKDIFEGPPAR-PTGIQVDKLKILDGDVTAHICENPVERTLAAARTYKRRVEAQMCGYGDLLEGFNFSTERKRILNHKFEPSFDDNVKQDKSIDVYGREEEE 234
BLAST of NO22G01330 vs. NCBI_GenBank
Match: XP_005706104.1 (hypothetical protein Gasu_30230 [Galdieria sulphuraria] >EME29584.1 hypothetical protein Gasu_30230 [Galdieria sulphuraria]) HSP 1 Score: 141.0 bits (354), Expect = 4.500e-30 Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 0 Query: 50 LNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGR-ADEDFNDEVSKLANA 218 + P++Y +GLA C++ +S GKL E +V+EP+ TLE + GVPTSYKR++ + RA + +I A + E VS CEN R AA RT++ R+EA+ I LGEV NF+T KRVLN+ FEPSF+DNVKQD SIDVYGR DE+ E+ KL NA Sbjct: 75 VKPDEYTVLGLAFCFQRDSNGKLQELVVIEPVPTSTLETILQGVPTSYKRLVATVYS--------RAMDISSIPP--AFVEDERVSFCENYSERLQAATRTYRARLEAKKIQLGEVYVTINFSTSPKRVLNEKFEPSFEDNVKQDISIDVYGRKKDEEVKSEIEKLYNA 233
BLAST of NO22G01330 vs. NCBI_GenBank
Match: OSX77157.1 (hypothetical protein BU14_0159s0012 [Porphyra umbilicalis]) HSP 1 Score: 118.2 bits (295), Expect = 3.100e-23 Identity = 80/172 (46.51%), Postives = 105/172 (61.05%), Query Frame = 0 Query: 54 DYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLE-CLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRR-VEAQIIPLGEV--ADD--FNFNTEK-KRVLNQVFEPSFDDNVKQDKSIDVYGRADEDFN-DEVSKLANA 218 DY VGLA+CY+ N KLD LV+EPL+ GTLE G PTSYKR++G T L P+ + E +G++ S E+ R AAARTFKRR + I+ +GEV A+D F T+ +R+LN+ +EP FDDNVKQDK+IDVYGR +E+ +V KL NA Sbjct: 48 DYCPVGLAVCYQRNQNNKLDAVLVVEPLSTGTLENVTGTGQPTSYKRILGATIEGL--------PDNPS-ELPEDFLQGDSASFSEDFAERMCAAARTFKRRPISKGILGVGEVKTAEDGTLTFCTDGIQRILNEEWEPKFDDNVKQDKTIDVYGRGEEEGGAADVQKLYNA 210
BLAST of NO22G01330 vs. NCBI_GenBank
Match: EFJ07938.1 (hypothetical protein SELMODRAFT_429288 [Selaginella moellendorffii]) HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0 Query: 37 VGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVE----AQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207 +GE T+ NP+D++ +GL C+ +S GKL + V+EP+ AG LEC+ G T YK V + + + + PE + A CE+ R+ AAR++ R + IPLG V DFN+N E KRVLN+V + DN+KQD SIDVYGR +D Sbjct: 65 IGENPTN-------NPDDFVVLGLGHCFIEDSNGKLQDHFVLEPIGAGALECMENGGKTCYKHVASMHLSTALAQDHSQLPEELRSGAF-----------CEDFAFRTKCAARSWMRDYPQEKIVRYIPLGTVRSDFNYNLEDKRVLNKVNIVTDADNIKQDMSIDVYGRKKDD 220
BLAST of NO22G01330 vs. NCBI_GenBank
Match: XP_002982748.1 (uncharacterized protein LOC9662093 [Selaginella moellendorffii] >EFJ15993.1 hypothetical protein SELMODRAFT_422124 [Selaginella moellendorffii]) HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0 Query: 37 VGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVE----AQIIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207 +GE T+ NP+D++ +GL C+ +S GKL + V+EP+ AG LEC+ G T YK V + + + + PE + A CE+ R+ AAR++ R + IPLG V DFN+N E KRVLN+V + DN+KQD SIDVYGR +D Sbjct: 65 IGENPTN-------NPDDFVVLGLGHCFIEDSNGKLQDHFVLEPIGAGALECMENGGKTCYKHVASMHLSTALAQDHSQLPEELRSGAF-----------CEDFAFRTKCAARSWMRDYPQEKIVRYIPLGTVRSDFNYNLEDKRVLNKVNIVTDADNIKQDMSIDVYGRKKDD 220
BLAST of NO22G01330 vs. NCBI_GenBank
Match: PNH08110.1 (hypothetical protein TSOC_005358 [Tetrabaena socialis]) HSP 1 Score: 108.2 bits (269), Expect = 3.200e-20 Identity = 66/163 (40.49%), Postives = 87/163 (53.37%), Query Frame = 0 Query: 48 APLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQ----IIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207 A + + Y+ +G+A C+K GG L LV+EPL+A +LECLA G TS+K V G+T D PE T CEN R AAART+++ + I+PLG+ +FNF+ E KR+LN S DN+KQD SIDVYGR D Sbjct: 48 AAITEDAYMVLGMAQCFK-KDGGTLSPVLVVEPLSASSLECLANGARTSFKMVTGVTYKDAMNRNRAALPESFG-----------TALFCENFAFRCEAAARTWQQSHAQENLMDIVPLGKARGNFNFSLEDKRILNMENVVSDSDNIKQDLSIDVYGRKKAD 198
BLAST of NO22G01330 vs. NCBI_GenBank
Match: OWY66670.1 (hypothetical protein B7486_35395 [cyanobacterium TDX16]) HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19 Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 0 Query: 50 LNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQ-IIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQ 194 L+PEDY+A+GLA C+ + G++ + ++EP+ + LE +A G+PTSYK V T + G+ L+ P G A + G+ R++AAART+K R A+ +IPLG +DFN++TE+KRVLN S DDNVKQ Sbjct: 13 LSPEDYVAIGLATCF-VKEDGEVRDLEIIEPIPSAALEAIAKGIPTSYKLVSATTLGTVLAGDKLQIPAGFPTSAQFSDDFGQ----------RAIAAARTYKSRTVAKDLIPLGTTREDFNYSTERKRVLNMKRVVSKDDNVKQ 146
BLAST of NO22G01330 vs. NCBI_GenBank
Match: XP_002956430.1 (hypothetical protein VOLCADRAFT_107210 [Volvox carteri f. nagariensis] >EFJ42574.1 hypothetical protein VOLCADRAFT_107210 [Volvox carteri f. nagariensis]) HSP 1 Score: 105.5 bits (262), Expect = 2.100e-19 Identity = 74/181 (40.88%), Postives = 98/181 (54.14%), Query Frame = 0 Query: 31 AKTVVNVGEGSTHVKELAPLNPEDYIAVGLAMCYKINSGGKLDEALVMEPLTAGTLECLALGVPTSYKRVIGLTCADLFLGEDLRAPEGINIEALRALAKGETVSECENMLIRSMAAARTFKRRVEAQ-----IIPLGEVADDFNFNTEKKRVLNQVFEPSFDDNVKQDKSIDVYGRADED 207 A+ V V +T V E E Y VGLA C++ +GG L+ LV+EPL+A +LECLA G TSYK V G++ G+ + + +A R CEN R AAART+ +R AQ I+PLG+ +FNF+ E KR+LN + DN+KQD SIDVYGR D Sbjct: 793 ARRTVRVMAYATDVPE------EAYACVGLAQCFR-KTGGGLEPVLVIEPLSASSLECLANGARTSYKMVTGVS-----FGDAMNRNRDVLPDAFR------DAPFCENYEFRCEAAARTW-QRPHAQDNLMDIVPLGKARSNFNFSLEDKRILNMDNVVNDSDNIKQDMSIDVYGRKKAD 954 The following BLAST results are available for this feature:
BLAST of NO22G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01330 ID=NO22G01330|Name=NO22G01330|organism=Nannochloropsis oceanica|type=gene|length=1552bpback to top protein sequence of NO22G01330.1 >NO22G01330.1-protein ID=NO22G01330.1-protein|Name=NO22G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=218bpback to top Synonyms
Publications
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