NO22G01270, NO22G01270 (gene) Nannochloropsis oceanica

Overview
NameNO22G01270
Unique NameNO22G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2525
Alignment locationchr22:385194..387718 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:385194..387718 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR076ngnoR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G01270.1NO22G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672128gene_7130Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100019g50gene8944Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G01270.1NO22G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G01270 ID=NO22G01270|Name=NO22G01270|organism=Nannochloropsis oceanica|type=gene|length=2525bp
TGGCACGTGTGCCGTGGGTTGAGATCTCATGTGAGATCGTGACATGCGCA
GCACGGTCTCGGCCGAGCGCTAGGACGTCGTCGCCCGTGTCCGTGCCCTT
CCTGGCCTACGAAGTCGCGCAAGCAGAGACAGCAATCAAGCGCACGGGCC
TGCACCCAGGGGGCTACCGTACAATTCGTGGGCCGTTTAGGCTCGGACAA
GCAGAATTGGTGTGTCGTGGAATATGGTCCCCAGAAAAAACGGAGGGCGA
GTGATGCGGTAACAGACCAAAGTGTAATGGTGCTTATTTTATCTCACCCA
AAGCTATTGGCCGTCATGGAATACGACAACGACGTAGACAGGAGTGTCTC
AACTTGGTGACTCACGGATACGTTGCAATAAAATTTGTCGTGCAGCGAGA
AGACTCTGATGGCCTGCAGGTTGCAGCCCAAAAAGTTGTTCCCAGAGTCC
GCGAGCGATCTTTTTTCAAGAGGGGGCTGCCATGTGTCTCTCCTAGGCCC
TCCTAAGAAGCCCTTCTTTATTTTGCGACGCACTTGCCGTCACACCAATT
TACACGGATACGCCCTTATTTGACCCGTGGAGGCCGGGCCGAGCGTCTAC
TGCTTGCACCCAGCCACCTCTTTTGGCCCATATAGTTGTTCTCTCACCAA
CCATCCCGCTTAGTAGAGAAAATTCAAAAGAACCAGGCTATCTAGCGAGA
GCTGAAAGGATCGCAAGGATCGCAGTCATTAAGCCTCGGCCCTTCTGGAG
AAGTGGCATTTCTTTTTATTCGTGGCCAACGCCTACGAACCAATCACTGA
GTCACCGAGTACTCAAGTCACTCACGCCACCCTTTTCTCGCCTCTCCCTA
CAACCCGTACTCGCACATGCAGTGAGTACACAAGCAACCGGATCACACAA
ATGCGATTTTCCTCATTGTGCATTGCACTCCTGCTCGTTCTGGCCCCGGC
TGTATTTGGGCTGCAGGAGGACGATGCAATCAACAAGGGCTCGCGCTCTC
GCCTTGTCTCCAAGCTGAAGCGTGAAGTGGTGACGGCGAAGAGCGGGAAT
GCTGCCCCGTTTCGTCACCATTCGCTTCAACTGAAGAGGGGAGAAAAGGC
TAGCAACGAGGAGAAGCTGTTGATGCCTGTGGAGAGAGGGCAGGGTGACG
AGAAATCGGATGAGAAAGAGGTACGCGCCTTGTTAGCGAGCAAGAAAGAC
AAGGCGGACAAAGCGTTTGAAGAAGCAGAAATGGGTTGGACAGATGAGGA
AGAAGAAGAGGAAACGAACGAATTTGAGGAAGATCGACTCGCGAAGGACG
AGGACGAGGACGACTGGGAGGATGAGGACGAGGACGAGGACGAGGACGAC
TGGGAGGATGAGGACAAGGACGAGGACGAGGACGACTGGGAGGATGAGGA
TGAGGACGAGGACGAGGACGACTGGGAGGTTGATAATGATGACGGTGATG
TGGCGCCGGCTATTTTGGAAGGTGAGTCCGCGGACGGAATCATAATCGTG
GAGGCCGACGACATGGAGAGCTTGGCCAAGGCGTTGAAGGAGGCTGGGGC
CACCGACGAGGACATTGAGGAAATAATGGAGGAAGAGGCGGCATTTGAAG
AGCTGGAGGAGGAGTTGGAGGCCGAGTTCGGTGGGGTCGATGAAGCCAAG
GCTGAGGCGGCAGGATGGGAGGCAGGGACAGTTATTGCCGAGAAGGCCAT
GAAGCAGAAGGGTGCGGGTAGCGAGGCTGACGAGGACGTGTCGGACGAAA
AAGACGAGGACGAGGACATGTTGGACGAGGAAGAGGACATATTGGACCAA
GAGGACGAAGATATGTTGGACGAGGACGAGGACATGTTGGACGAGGAGGA
CGGGAAGTTGTTAGATGAGGACGAGGACGAGGAAGCTGTCGCCGCGAGTA
GCAAGGGAGCAGTTACTGCAGAAGAGTCAATTTCGCTGGAAGCTGCGTCG
GCCAGCGTGGGAGGAGGGCATGAGGAAAAGAGTTCCTCATTCTCGTCTCG
CGCCGGATTCATCTGGGCTCTTTCAGGGATTTGTGGCCTCATGGTGCTTG
TGGCGGCCGTGTGGAAGACGGCGGCTCGTCATTCGTCGTCCGACTTGTAC
AGTATGCCCAACACAACAGCCTTTGGTAGTGACGCTTCGTCGCAGGAGCA
ACCGTTTGGCCTAGACGCCGAGGCCTCTCTGACGCAGCACTACGGCCAGT
ATCGCCGTGTCACTGCGCATGGCCAAGAGTCTCGTTAAGATCCGTGGAAG
CAAAAAACAGGATTATGCTTACCGGAAAGGGTGATGGACGAGGATAATCC
AACGTATTAGCATTGGATGTTGACTGCTCGATGTATAAATGATAATCACA
AGAGGTCTGGTTTGAATGAGACTCTGAAAGAAGAGGTCGAGAGAAGTAGG
ACGAGCAGGGAGAAATTACTTTATTGACCGAAACCCAAAAAGATAGGAGA
GAAATGCAGATGGGGAAAAGTACTTAAGACTTTATCAAATAAAGTGGATT
CTGAGGGGAAATCGGGTAGTGTTAT
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protein sequence of NO22G01270.1

>NO22G01270.1-protein ID=NO22G01270.1-protein|Name=NO22G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=446bp
MRFSSLCIALLLVLAPAVFGLQEDDAINKGSRSRLVSKLKREVVTAKSGN
AAPFRHHSLQLKRGEKASNEEKLLMPVERGQGDEKSDEKEVRALLASKKD
KADKAFEEAEMGWTDEEEEEETNEFEEDRLAKDEDEDDWEDEDEDEDEDD
WEDEDKDEDEDDWEDEDEDEDEDDWEVDNDDGDVAPAILEGESADGIIIV
EADDMESLAKALKEAGATDEDIEEIMEEEAAFEELEEELEAEFGGVDEAK
AEAAGWEAGTVIAEKAMKQKGAGSEADEDVSDEKDEDEDMLDEEEDILDQ
EDEDMLDEDEDMLDEEDGKLLDEDEDEEAVAASSKGAVTAEESISLEAAS
ASVGGGHEEKSSSFSSRAGFIWALSGICGLMVLVAAVWKTAARHSSSDLY
SMPNTTAFGSDASSQEQPFGLDAEASLTQHYGQYRRVTAHGQESR*
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Synonyms
Publications